Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 0.0e+00 1162.9 596 100.0
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 1.8e-281 972.2 602 83.7
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 2.3e-281 971.8 602 82.4
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 6.7e-281 970.3 602 82.9
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 2.8e-279 964.9 602 81.9
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 5.3e-278 960.7 593 82.8
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 3.4e-277 958.0 594 82.8
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 7.7e-277 956.8 601 81.9
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 1.3e-276 956.1 626 79.6
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 2.2e-276 955.3 603 81.6
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 2.2e-276 955.3 600 82.0
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 2.9e-276 954.9 592 83.1
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 2.5e-275 951.8 601 80.9
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 5.5e-275 950.7 602 80.7
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 5.5e-275 950.7 603 81.4
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 6.1e-274 947.2 600 80.3
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 3.0e-273 944.9 614 79.2
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 5.1e-273 944.1 603 81.3
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 6.7e-273 943.7 602 80.9
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 2.0e-272 942.2 602 81.2
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 4.4e-272 941.0 606 79.7
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 5.7e-272 940.6 601 80.5
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 9.7e-272 939.9 602 79.7
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 1.3e-271 939.5 599 80.3
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 6.3e-271 937.2 603 79.4
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 8.2e-271 936.8 600 80.3
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 1.1e-270 936.4 603 80.4
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 3.4e-269 931.4 603 78.9
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 1.7e-268 929.1 594 79.8
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 8.5e-268 926.8 593 80.3
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 1.9e-267 925.6 598 80.3
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 4.2e-267 924.5 592 80.2
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 7.2e-267 923.7 650 74.3
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 9.4e-267 923.3 594 79.1
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 6.1e-266 920.6 603 79.9
CiPaw.09G139600 Carya illinoinensis HOM05D004329 ORTHO05D005516 8.0e-266 920.2 569 82.4
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 1.0e-265 919.8 594 79.1
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 1.4e-265 919.5 602 79.6
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 1.4e-265 919.5 601 78.2
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 1.4e-265 919.5 601 78.0
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 1.8e-265 919.1 594 79.3
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 2.3e-265 918.7 602 78.4
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 3.9e-265 917.9 659 73.6
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 5.2e-265 917.5 601 78.4
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 5.2e-265 917.5 601 78.0
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 6.7e-265 917.1 603 77.9
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 3.3e-264 914.8 601 77.9
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 5.7e-264 914.1 603 77.8
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 1.3e-263 912.9 603 77.4
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 2.2e-263 912.1 622 77.0
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 2.8e-263 911.8 603 77.6
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 3.7e-263 911.4 603 77.8
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 2.4e-262 908.7 601 77.7
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 2.4e-262 908.7 603 77.6
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 4.1e-262 907.9 603 77.6
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 1.2e-261 906.4 603 77.6
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 2.6e-261 905.2 603 77.1
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 2.6e-261 905.2 603 77.1
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 4.5e-261 904.4 596 78.4
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 1.0e-260 903.3 603 77.1
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 2.2e-260 902.1 593 77.6
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 2.9e-260 901.7 594 78.3
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.1e-259 899.8 607 77.8
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 1.5e-259 899.4 600 76.3
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 1.9e-259 899.0 598 76.4
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 5.5e-259 897.5 602 76.7
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 9.4e-259 896.7 593 76.6
Lj5A87T69 Lonicera japonica HOM05D004329 ORTHO05D005516 9.4e-259 896.7 589 78.1
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.6e-258 896.0 618 76.7
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 3.6e-258 894.8 605 77.5
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 1.0e-257 893.3 683 70.3
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 1.4e-257 892.9 600 75.8
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 2.3e-257 892.1 622 74.6
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 4.0e-257 891.3 604 76.8
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 8.8e-257 890.2 598 75.6
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 8.8e-257 890.2 600 76.2
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 3.3e-256 888.3 598 75.4
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 9.7e-256 886.7 598 75.3
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 2.2e-255 885.6 598 75.1
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 2.2e-255 885.6 597 75.4
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 2.4e-254 882.1 598 74.9
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 2.4e-254 882.1 598 74.9
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 2.4e-254 882.1 598 74.9
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 3.1e-254 881.7 599 75.8
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 7.0e-254 880.6 598 74.7
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 9.1e-254 880.2 599 74.6
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 1.2e-253 879.8 594 75.1
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 2.0e-253 879.0 570 80.0
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 2.7e-253 878.6 603 74.6
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 3.5e-253 878.2 596 75.8
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 1.1e-251 873.2 596 74.8
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 2.0e-248 862.4 598 73.9
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 2.2e-247 859.0 601 76.5
Hund02504 Selenicereus undatus HOM05D004329 ORTHO05D005516 2.8e-247 858.6 550 80.5
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 3.7e-247 858.2 599 73.8
Actinidia08906 Actinidia chinensis HOM05D000877 ORTHO05D001509 7.0e-246 854.0 553 78.5
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 1.6e-245 852.8 599 73.3
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 6.6e-244 847.4 602 71.8
BcaB07g29807 Brassica carinata HOM05D004329 ORTHO05D005516 1.9e-243 845.9 623 71.3
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 3.3e-243 845.1 563 77.6
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.6e-242 842.8 570 77.9
DCAR_016350 Daucus carota HOM05D004329 ORTHO05D005516 3.6e-242 841.6 599 73.1
Cpa.g.sc13.162 Carica papaya HOM05D004329 ORTHO05D005516 1.9e-235 819.3 595 73.3
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 4.7e-234 814.7 614 70.2
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 2.3e-233 812.4 592 73.0
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 1.2e-232 810.1 639 68.1
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 1.7e-231 806.2 592 72.5
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 8.9e-225 783.9 657 63.0
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 8.3e-223 777.3 599 68.6
MBI13_g15007_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 9.2e-222 773.9 504 78.6
PGSC0003DMG400015501 Solanum tuberosum HOM05D004329 ORTHO05D005516 1.5e-219 766.5 494 78.9
CDE04G3457 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 2.5e-219 765.8 599 67.9
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 9.5e-219 763.8 477 81.6
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 4.9e-215 751.5 593 66.1
SEGI_15405 Sequoiadendron giganteum HOM05D004329 ORTHO05D005516 5.1e-212 741.5 597 63.5
CARHR275760 Cardamine hirsuta HOM05D004329 ORTHO05D005516 4.0e-209 731.9 476 77.7
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 7.8e-197 691.0 549 68.9
C02p61780 Brassica napus HOM05D004329 ORTHO05D005516 5.1e-188 661.8 427 78.0
MBI13_g43178_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 4.5e-184 648.7 504 68.8
Cc09_g07950 Coffea canephora HOM05D004329 ORTHO05D005516 2.9e-183 646.0 442 76.5
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 9.7e-171 604.4 587 54.0
Pp3c15_22190 Physcomitrium patens HOM05D004329 ORTHO05D005516 2.3e-164 583.2 570 53.2
Mapoly0153s0017 Marchantia polymorpha HOM05D004329 ORTHO05D005516 9.7e-163 577.8 596 50.7
Os08g0323000 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D005516 3.1e-153 546.2 436 64.9
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 1.4e-148 530.8 335 82.1
A02p41850 Brassica napus HOM05D004329 ORTHO05D005516 2.9e-143 513.1 367 72.2
CBR_g20988 Chara braunii HOM05D004329 ORTHO05D005516 3.4e-139 499.6 619 44.4
HPP92_028710 Vanilla planifolia HOM05D004329 ORTHO05D005516 3.8e-135 486.1 417 62.4
SMO356G0738 Selaginella moellendorffii HOM05D004329 ORTHO05D005516 1.7e-130 470.7 570 45.3
Nitab4.5_0017885g0010 Nicotiana tabacum HOM05D004329 ORTHO05D005516 5.9e-128 462.2 332 72.6
Nitab4.5_0009429g0030 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.6e-125 454.1 288 81.2
FAN18G2676 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.2e-123 448.0 531 52.0
CDE07G0688 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 1.0e-111 408.3 248 83.5
Cc00_g30130 Coffea canephora HOM05D004329 ORTHO05D005516 3.0e-111 406.8 281 76.2
Aqoxy5G01090 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 7.3e-110 402.1 436 52.1
TAR622G0210 Trochodendron aralioides HOM05D004329 ORTHO05D005516 1.1e-97 361.7 318 63.2
CDE07G1247 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 1.5e-94 351.3 273 68.5
Cre06.g267100 Chlamydomonas reinhardtii HOM05D004329 ORTHO05D005516 7.6e-75 285.8 669 31.5
MBI13_g13130_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 3.5e-72 276.9 181 79.0
MCO15G338 Micromonas commoda HOM05D004329 ORTHO05D005516 1.1e-70 271.9 549 34.1
BcaC03g18112 Brassica carinata HOM05D004329 ORTHO05D005516 3.9e-63 246.9 153 79.7
Cc09_g07990 Coffea canephora HOM05D004329 ORTHO05D005516 3.1e-60 237.3 154 77.9
Cc09_g07980 Coffea canephora HOM05D004329 ORTHO05D005516 4.5e-59 233.4 152 75.7
CSS0009974 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 7.7e-43 179.5 107 84.1
CSS0034501 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.0e-42 179.1 105 85.7
PRCOL_00003443 Prasinoderma coloniale HOM05D004329 ORTHO05D005516 1.0e-39 169.1 622 26.5
Solyc02g062830.2 Solanum lycopersicum HOM05D004329 ORTHO05D005516 3.8e-34 150.6 96 76.0
C02p61790 Brassica napus HOM05D004329 ORTHO05D005516 2.4e-28 131.3 98 66.3
AagrBONN_evm.TU.Sc2ySwM_228.1281 Anthoceros agrestis HOM05D004329 ORTHO05D005516 3.1e-28 131.0 116 57.8
AagrBONN_evm.TU.Sc2ySwM_228.1280 Anthoceros agrestis HOM05D004329 ORTHO05D005516 5.3e-28 130.2 186 42.5
CARHR275770 Cardamine hirsuta HOM05D004329 ORTHO05D005516 1.6e-27 128.6 99 61.6
Haze_22596 Corylus avellana HOM05D004329 ORTHO05D010424 4.7e-24 117.1 74 75.7
Solyc02g062840.1 Solanum lycopersicum HOM05D004329 ORTHO05D005516 3.0e-23 114.4 66 80.3
CAN.G865.5 Capsicum annuum HOM05D004329 ORTHO05D005516 2.8e-21 107.8 67 68.7
Cfa027290 Carpinus fangiana HOM05D004329 ORTHO05D121551 5.4e-20 103.6 644 23.3
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 9.4e-17 92.8 78 56.4
Lsat_1_v5_gn_5_81961 Lactuca sativa HOM05D004329 ORTHO05D005516 2.1e-16 91.7 53 83.0
Lsat_1_v5_gn_8_114301 Lactuca sativa HOM05D004329 ORTHO05D005516 1.0e-15 89.4 53 81.1
Lsat_1_v5_gn_2_122301 Lactuca sativa HOM05D009063 ORTHO05D011082 1.4e-15 89.0 222 30.6
CSS0048280 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.5e-14 85.5 99 53.5
Zm00001eb202340 Zea mays HOM05D004329 ORTHO05D005516 2.0e-11 75.1 71 49.3
Hund31053 Selenicereus undatus HOM05D004329 ORTHO05D026010 2.9e-10 71.2 53 75.5
Sopen02g013860 Solanum pennellii HOM05D004329 ORTHO05D026010 3.8e-10 70.9 61 62.3
Hund31064 Selenicereus undatus HOM05D004329 ORTHO05D026010 8.6e-10 69.7 53 73.6
Solyc04g048930.1 Solanum lycopersicum HOM05D004329 ORTHO05D026010 1.8e-07 62.0 54 57.4


User provided reference genes

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