Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 0.0e+00 1191.4 593 100.0
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 2.6e-293 1011.5 593 83.5
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 3.4e-293 1011.1 592 82.4
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 2.9e-292 1008.1 608 81.9
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 1.6e-290 1002.3 598 81.3
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 6.0e-290 1000.3 590 82.7
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 7.9e-290 1000.0 593 82.5
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 2.3e-289 998.4 593 82.1
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 2.4e-286 988.4 596 79.7
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 4.0e-286 987.6 593 81.3
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 3.4e-285 984.6 594 81.6
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 4.5e-285 984.2 594 82.0
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 7.6e-285 983.4 616 78.4
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 2.2e-284 981.9 592 80.7
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 2.9e-284 981.5 595 80.7
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 3.8e-284 981.1 594 81.0
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 6.4e-284 980.3 594 81.8
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 6.4e-284 980.3 594 81.6
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 8.4e-284 979.9 594 81.1
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 5.5e-283 977.2 594 80.8
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 5.5e-283 977.2 594 82.3
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 9.3e-283 976.5 592 80.9
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 1.2e-282 976.1 593 79.8
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 2.7e-282 974.9 594 79.3
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 3.5e-282 974.5 594 80.1
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 3.5e-282 974.5 594 80.1
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 7.9e-282 973.4 592 80.2
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 7.9e-282 973.4 597 78.4
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 1.0e-281 973.0 593 79.4
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.0e-281 973.0 594 80.3
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 1.3e-281 972.6 593 79.4
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 5.1e-281 970.7 594 79.3
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 5.1e-281 970.7 595 80.7
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 1.1e-280 969.5 596 80.2
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 2.4e-278 961.8 605 78.2
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 3.1e-278 961.4 593 77.1
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 6.9e-278 960.3 605 78.2
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 1.5e-277 959.1 575 81.0
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 3.4e-277 958.0 621 76.5
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 3.4e-277 958.0 572 82.3
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 6.5e-276 953.7 594 78.6
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 1.4e-275 952.6 593 76.2
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.4e-275 952.6 605 77.4
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 1.4e-275 952.6 604 78.1
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 9.3e-275 949.9 604 78.3
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 1.6e-274 949.1 594 76.9
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 2.1e-274 948.7 598 77.9
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 6.0e-274 947.2 597 78.2
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.8e-273 945.7 605 76.9
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 3.0e-273 944.9 603 77.6
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 6.7e-273 943.7 604 77.5
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 3.3e-272 941.4 604 77.5
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 3.3e-272 941.4 604 77.3
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 1.4e-270 936.0 611 75.1
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 9.0e-270 933.3 600 74.7
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 2.0e-269 932.2 594 77.3
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 1.7e-268 929.1 604 76.5
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 2.2e-268 928.7 594 75.6
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 2.2e-268 928.7 594 77.1
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 2.9e-268 928.3 602 76.4
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 1.1e-267 926.4 594 75.4
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 1.1e-267 926.4 594 75.4
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 1.4e-267 926.0 604 75.5
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 3.2e-267 924.9 595 77.1
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 9.3e-267 923.3 572 79.4
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 9.3e-267 923.3 607 75.0
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 2.1e-266 922.2 594 75.1
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 2.7e-266 921.8 607 74.8
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 4.6e-266 921.0 607 75.0
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 1.8e-265 919.1 607 74.6
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 3.0e-265 918.3 594 75.8
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 3.9e-265 917.9 600 75.5
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 6.7e-265 917.1 627 72.6
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 5.7e-264 914.1 586 76.3
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 2.8e-263 911.8 603 75.1
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 1.1e-262 909.8 605 73.4
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 9.1e-262 906.7 576 77.1
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 1.3e-260 902.9 730 65.1
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 1.9e-259 899.0 571 77.6
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 4.2e-259 897.9 605 74.2
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 7.2e-259 897.1 594 74.9
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.2e-258 896.3 594 74.7
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 1.4e-257 892.9 626 74.3
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 1.8e-257 892.5 593 73.0
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 1.3e-255 886.3 607 72.3
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 2.2e-255 885.6 631 70.4
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 1.1e-254 883.2 594 75.4
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 2.6e-253 878.6 594 74.1
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 7.7e-253 877.1 593 71.5
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 8.5e-252 873.6 524 80.0
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 4.8e-247 857.8 594 73.1
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 7.0e-246 854.0 594 70.5
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 1.0e-244 850.1 570 74.7
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 3.8e-244 848.2 594 73.6
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 1.7e-239 832.8 606 68.6
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 1.8e-238 829.3 584 72.9
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 1.6e-237 826.2 598 69.2
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 2.9e-236 822.0 517 77.8
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 3.8e-236 821.6 601 68.2
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 8.5e-236 820.5 604 68.2
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 1.2e-234 816.6 597 69.2
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 1.5e-232 809.7 597 68.3
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 1.4e-230 803.1 533 75.2
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 5.4e-230 801.2 601 66.2
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 2.7e-229 798.9 527 74.6
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 2.7e-229 798.9 597 65.3
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 1.5e-227 793.1 601 66.7
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 2.4e-222 775.8 578 67.8
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 2.3e-220 769.2 789 55.8
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.6e-218 763.1 526 72.2
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 6.1e-218 761.1 604 65.9
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 1.7e-215 753.1 594 64.6
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 9.2e-214 747.3 487 76.6
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 5.0e-212 741.5 599 63.6
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 2.5e-211 739.2 460 78.5
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.5e-200 703.4 443 76.1
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 3.7e-199 698.7 515 67.6
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 1.7e-196 689.9 614 57.7
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 9.6e-187 657.5 579 60.4
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 3.6e-186 655.6 606 55.3
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.9e-179 633.3 425 75.8
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 1.4e-177 627.1 584 54.1
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 6.0e-173 611.7 499 63.5
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 7.9e-173 611.3 608 54.3
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 1.8e-172 610.1 794 47.4
Rhsim09G0091000 Rhododendron simsii HOM05D003829 ORTHO05D004943 2.7e-165 586.3 409 71.1
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 6.5e-159 565.1 400 72.0
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 2.0e-152 543.5 596 48.0
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 1.9e-150 537.0 611 47.1
Haze_18554 Corylus avellana HOM05D003829 ORTHO05D004943 7.9e-149 531.6 381 71.1
HPP92_013144 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.0e-127 461.5 330 70.9
Haze_25314 Corylus avellana HOM05D003829 ORTHO05D004943 9.4e-126 454.9 318 73.0
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 6.8e-116 422.2 289 72.3
Nitab4.5_0001328g0030 Nicotiana tabacum HOM05D003829 ORTHO05D004943 3.3e-110 403.3 593 42.3
QL10p029183 Quercus lobata HOM05D003829 ORTHO05D004943 5.5e-110 402.5 259 76.1
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 3.6e-109 399.8 416 51.9
HPP92_012745 Vanilla planifolia HOM05D003829 ORTHO05D004943 4.9e-106 389.4 328 62.8
HPP92_013183 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.6e-104 384.4 457 47.0
SEGI_36904 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.5e-104 383.3 291 67.4
HPP92_013146 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.7e-90 336.7 307 58.3
Nitab4.5_0000069g0100 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.2e-85 321.6 257 63.4
SEGI_15169 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.8e-84 317.8 189 79.9
Nitab4.5_0023629g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.2e-77 295.0 171 83.6
HPP92_013143 Vanilla planifolia HOM05D003829 ORTHO05D004943 4.7e-77 293.1 262 56.1
SEGI_31614 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 6.8e-76 289.3 175 78.9
Nitab4.5_0021995g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.7e-74 284.6 190 75.8
Nitab4.5_0023875g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 3.2e-73 280.4 176 77.8
C02p08100 Brassica napus HOM05D003829 ORTHO05D004943 1.0e-71 275.4 203 64.0
BcaC03g18463 Brassica carinata HOM05D003829 ORTHO05D004943 5.8e-67 259.6 204 60.8
Migut.L00154 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.4e-65 254.2 153 81.7
BolC2t06732H Brassica oleracea HOM05D003829 ORTHO05D004943 3.2e-65 253.8 204 60.3
Haze_18553 Corylus avellana HOM05D003829 ORTHO05D004943 9.3e-65 252.3 154 80.5
Haze_25313 Corylus avellana HOM05D003829 ORTHO05D004943 9.3e-65 252.3 157 79.0
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 2.0e-59 234.6 467 35.3
Sp5g27630 Schrenkiella parvula HOM05D003829 ORTHO05D004943 3.8e-58 230.3 257 49.8
SEGI_27435 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.8e-55 221.5 142 69.0
Eucgr.E02529 Eucalyptus grandis HOM05D003829 ORTHO05D004943 2.0e-51 208.0 130 79.2
Eucgr.B00970 Eucalyptus grandis HOM05D003829 ORTHO05D004943 8.4e-50 202.6 121 77.7
BraA03t10079Z Brassica rapa HOM05D000168 ORTHO05D000811 6.7e-47 193.0 120 70.0
Oeu029991.1 Olea europaea HOM05D003829 ORTHO05D004943 8.7e-47 192.6 116 75.0
A03p07510 Brassica napus HOM05D003829 ORTHO05D004943 1.1e-46 192.2 120 70.8
SEGI_39885 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 7.4e-46 189.5 120 70.0
Glyma.05G172902 Glycine max HOM05D003829 ORTHO05D004943 1.8e-44 184.9 145 66.2
C03p08720 Brassica napus HOM05D003829 ORTHO05D004943 5.3e-44 183.3 120 68.3
BolC3t13370H Brassica oleracea HOM05D000168 ORTHO05D000811 1.2e-43 182.2 120 67.5
HPP92_013186 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.7e-37 160.6 181 48.1
Rhsim09G0090700 Rhododendron simsii HOM05D000822 ORTHO05D002021 1.8e-36 158.3 183 53.0
HanXRQChr05g0129701 Helianthus annuus HOM05D003829 ORTHO05D044979 9.0e-36 156.0 93 79.6
SEGI_23908 Sequoiadendron giganteum HOM05D003829 ORTHO05D004052 7.2e-33 146.4 227 42.7
MELO3C000039.2 Cucumis melo HOM05D003829 ORTHO05D004943 6.9e-28 129.8 75 76.0
Glyma.10G113400 Glycine max HOM05D003829 ORTHO05D028379 5.0e-26 123.6 149 49.0
CARHR202060 Cardamine hirsuta HOM05D003829 ORTHO05D116213 6.1e-24 116.7 66 81.8
TPR.G25992 Trifolium pratense HOM05D003829 ORTHO05D015515 1.0e-23 115.9 70 78.6
Hma1.2p1_0340F.1_g130220 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 3.9e-23 114.0 127 52.0
Lsat_1_v5_gn_3_100941 Lactuca sativa HOM05D002028 ORTHO05D022527 2.6e-22 111.3 72 70.8
MELO3C029751.2 Cucumis melo HOM05D003829 ORTHO05D044979 1.3e-21 109.0 87 64.4
HPP92_012679 Vanilla planifolia HOM05D000282 ORTHO05D004791 4.5e-19 100.5 119 47.1
Nitab4.5_0000138g0100 Nicotiana tabacum HOM05D003829 ORTHO05D284283 9.7e-14 82.8 192 32.3
Haze_25315 Corylus avellana HOM05D003829 ORTHO05D004943 8.2e-13 79.7 60 63.3
Lsat_1_v5_gn_4_30320 Lactuca sativa HOM05D003829 ORTHO05D015515 7.7e-11 73.2 38 89.5
BolC1t02481H Brassica oleracea HOM05D003829 ORTHO05D015515 1.8e-07 62.0 47 68.1
TAR374G1547 Trochodendron aralioides HOM05D003829 ORTHO05D004943 1.8e-07 62.0 32 81.2
Lsat_1_v5_gn_1_100681 Lactuca sativa HOM05D003829 ORTHO05D228871 2.6e-06 58.2 34 79.4
A03p61070 Brassica napus HOM05D003829 ORTHO05D028154 7.5e-06 56.6 45 71.1
BraA03t15147Z Brassica rapa HOM05D040596 ORTHO05D028154 7.5e-06 56.6 45 71.1


User provided reference genes

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