Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004331001 Vitis vinifera HOM05D004664 ORTHO05D005526 9.8e-104 380.2 197 100.0
GSVIVG01004440001 Vitis vinifera HOM05D004664 ORTHO05D005526 5.3e-49 198.4 103 99.0
Dinv01695 Davidia involucrata HOM05D004664 ORTHO05D005526 1.0e-44 184.1 229 48.9
Dinv11048 Davidia involucrata HOM05D004664 ORTHO05D005526 1.1e-43 180.6 229 48.5
Cfa002678 Carpinus fangiana HOM05D004664 ORTHO05D005526 9.0e-41 171.0 207 50.2
TAR636G0408 Trochodendron aralioides HOM05D004664 ORTHO05D005526 1.2e-40 170.6 243 46.5
Prupe.3G183500 Prunus persica HOM05D004664 ORTHO05D005526 2.9e-39 166.0 194 51.0
GSVIVG01004113001 Vitis vinifera HOM05D004664 ORTHO05D005526 6.5e-39 164.9 84 98.8
Lj1A1166G81 Lonicera japonica HOM05D004664 ORTHO05D005526 2.1e-37 159.8 232 47.8
CiPaw.05G165700 Carya illinoinensis HOM05D004664 ORTHO05D005526 6.1e-37 158.3 225 45.8
TWI38G1364 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 3.9e-36 155.6 226 47.3
Atru.chr1.2210 Acer truncatum HOM05D004664 ORTHO05D005526 8.7e-36 154.5 186 48.9
Lj6C128G4 Lonicera japonica HOM05D004664 ORTHO05D005526 1.5e-35 153.7 233 45.5
TAR633G0600 Trochodendron aralioides HOM05D004664 ORTHO05D005526 1.5e-35 153.7 238 45.8
Actinidia28954 Actinidia chinensis HOM05D004664 ORTHO05D005526 3.3e-35 152.5 230 42.2
TWI63G0464 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 1.1e-33 147.5 251 39.0
Haze_07058 Corylus avellana HOM05D004664 ORTHO05D005526 1.4e-33 147.1 208 46.2
Gorai.009G332500 Gossypium raimondii HOM05D004664 ORTHO05D005526 4.5e-32 142.1 223 41.3
QL05p066226 Quercus lobata HOM05D004664 ORTHO05D005526 4.5e-32 142.1 216 44.4
Phvul.003G154500 Phaseolus vulgaris HOM05D004664 ORTHO05D005526 5.9e-32 141.7 189 46.0
Gohir.D05G311400 Gossypium hirsutum HOM05D004664 ORTHO05D005526 1.0e-31 141.0 223 40.8
Gohir.A05G310600 Gossypium hirsutum HOM05D004664 ORTHO05D005526 8.5e-31 137.9 223 40.4
Ciclev10015263m.g Citrus clementina HOM05D004664 ORTHO05D005526 1.1e-30 137.5 196 46.4
Duzib268G1219 Durio zibethinus HOM05D004664 ORTHO05D005526 1.1e-30 137.5 225 40.9
MD17G1131000 Malus domestica HOM05D004664 ORTHO05D005526 1.9e-30 136.7 233 40.8
Sopen10g004780 Solanum pennellii HOM05D004664 ORTHO05D005526 1.9e-30 136.7 183 44.8
VMungo1215G0123 Vigna mungo HOM05D004664 ORTHO05D005526 1.9e-30 136.7 188 46.3
MBI15_g26850_MAGBIO Magnolia biondii HOM05D004664 ORTHO05D005526 5.5e-30 135.2 228 43.0
arahy.Tifrunner.gnm1.ann1.6YF458 Arachis hypogaea HOM05D004664 ORTHO05D005526 1.6e-29 133.7 194 42.8
COL.COLO4_20401 Corchorus olitorius HOM05D004664 ORTHO05D005526 1.6e-29 133.7 225 37.8
Cc09_g09380 Coffea canephora HOM05D004664 ORTHO05D005526 2.7e-29 132.9 207 42.0
PSO541G3178 Papaver somniferum HOM05D004664 ORTHO05D005526 3.6e-29 132.5 238 40.3
Solyc10g009000.4 Solanum lycopersicum HOM05D004664 ORTHO05D005526 3.6e-29 132.5 183 45.4
arahy.Tifrunner.gnm1.ann1.U25ASJ Arachis hypogaea HOM05D004664 ORTHO05D005526 6.1e-29 131.7 194 42.8
PSO675G1009 Papaver somniferum HOM05D004664 ORTHO05D005526 7.9e-29 131.3 238 40.3
Thecc.08G197000 Theobroma cacao HOM05D004664 ORTHO05D005526 1.0e-28 131.0 209 43.1
SGA_v2.0_scaffold239G43984 Striga asiatica HOM05D004664 ORTHO05D005526 3.0e-28 129.4 231 44.2
Cc07_g14650 Coffea canephora HOM05D004664 ORTHO05D005526 1.5e-27 127.1 202 40.6
Hma1.2p1_0277F.1_g111600 Hydrangea macrophylla HOM05D004664 ORTHO05D005526 2.0e-27 126.7 218 41.7
Migut.H01639 Erythranthe guttata HOM05D004664 ORTHO05D005526 3.3e-27 125.9 226 42.0
MELO3C017782.2 Cucumis melo HOM05D004664 ORTHO05D005526 5.7e-27 125.2 207 40.1
FAN18G2840 Fragaria x ananassa HOM05D004664 ORTHO05D005526 5.7e-27 125.2 194 45.4
Lalb_Chr04g0264741 Lupinus albus HOM05D004664 ORTHO05D005526 7.4e-27 124.8 195 40.0
Glyma.07G270100 Glycine max HOM05D004664 ORTHO05D005526 1.3e-26 124.0 189 43.4
Lsat_1_v5_gn_4_109780 Lactuca sativa HOM05D004664 ORTHO05D005526 1.3e-26 124.0 182 41.2
arahy.Tifrunner.gnm1.ann1.3Z2F0I Arachis hypogaea HOM05D004664 ORTHO05D005526 4.8e-26 122.1 194 41.2
CsaV3_1G046480 Cucumis sativus L. HOM05D004664 ORTHO05D005526 1.1e-25 120.9 211 40.3
RcHm_v2.0_Chr7g0230211 Rosa chinensis HOM05D004664 ORTHO05D005526 1.1e-25 120.9 196 43.4
CAN.G413.16 Capsicum annuum HOM05D004664 ORTHO05D005526 1.4e-25 120.6 226 38.5
MELO3C021804.2 Cucumis melo HOM05D004664 ORTHO05D005526 3.1e-25 119.4 219 38.4
Lj6g0004292 Lotus japonicus HOM05D004664 ORTHO05D005526 9.1e-25 117.9 196 42.9
Nitab4.5_0009068g0020 Nicotiana tabacum HOM05D004664 ORTHO05D005526 1.2e-24 117.5 264 35.2
Potri.015G143000 Populus trichocarpa HOM05D004664 ORTHO05D005526 1.2e-24 117.5 211 39.8
CAN.G567.108 Capsicum annuum HOM05D004664 ORTHO05D005526 1.5e-24 117.1 236 35.2
Cpa.g.sc27.187 Carica papaya HOM05D004664 ORTHO05D005526 1.5e-24 117.1 208 38.9
Medtr1g043000 Medicago truncatula HOM05D004664 ORTHO05D005526 1.5e-24 117.1 179 40.2
Medtr4g064230 Medicago truncatula HOM05D004664 ORTHO05D005526 2.6e-24 116.3 186 39.2
Nitab4.5_0003942g0040 Nicotiana tabacum HOM05D004664 ORTHO05D005526 4.5e-24 115.5 212 38.2
BcaB03g12095 Brassica carinata HOM05D004664 ORTHO05D005526 7.7e-24 114.8 186 41.4
PGSC0003DMG400022830 Solanum tuberosum HOM05D004664 ORTHO05D005526 7.7e-24 114.8 152 44.7
Aqoxy5G01821 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 2.9e-23 112.8 188 39.9
Psat0s2550g0080 Pisum sativum HOM05D004664 ORTHO05D005526 3.8e-23 112.5 187 40.1
Aqoxy1G03457 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 5.0e-23 112.1 181 41.4
BolC3t19796H Brassica oleracea HOM05D004664 ORTHO05D005526 5.0e-23 112.1 198 38.9
HanXRQChr15g0489541 Helianthus annuus HOM05D004664 ORTHO05D005526 5.0e-23 112.1 221 38.0
AUR62028851 Chenopodium quinoa HOM05D004664 ORTHO05D005526 6.5e-23 111.7 228 35.1
Medtr4g134340 Medicago truncatula HOM05D004664 ORTHO05D005526 6.5e-23 111.7 189 38.6
EL10Ac3g07399 Beta vulgaris HOM05D004664 ORTHO05D005526 8.5e-23 111.3 229 35.8
Ca_04223_v3 Cicer arietinum L. HOM05D004664 ORTHO05D005526 8.5e-23 111.3 197 40.6
Lj4g0012990 Lotus japonicus HOM05D004664 ORTHO05D005526 8.5e-23 111.3 182 41.8
C03p75380 Brassica napus HOM05D004664 ORTHO05D005526 1.4e-22 110.5 198 38.9
Manes.08G015000 Manihot esculenta HOM05D004664 ORTHO05D005526 7.2e-22 108.2 248 34.7
Sc25g0005660 Simmondsia chinensis HOM05D004664 ORTHO05D005526 1.6e-21 107.1 236 35.6
AUR62005705 Chenopodium quinoa HOM05D004664 ORTHO05D005526 2.1e-21 106.7 227 34.8
ECA247G2196 Erigeron canadensis HOM05D004664 ORTHO05D005526 4.7e-21 105.5 221 36.7
Aa31LG6G11170 Aethionema arabicum HOM05D004664 ORTHO05D005526 1.4e-20 104.0 178 37.6
Carub.0004s0328 Capsella rubella HOM05D004664 ORTHO05D005526 1.4e-20 104.0 178 38.8
ECA238G0224 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.4e-20 104.0 221 36.2
HPP92_017531 Vanilla planifolia HOM05D004664 ORTHO05D005526 1.4e-20 104.0 234 36.3
BcaC01g00070 Brassica carinata HOM05D004664 ORTHO05D005526 1.8e-20 103.6 208 37.0
Nn1g08309 Nelumbo nucifera HOM05D004664 ORTHO05D005526 1.8e-20 103.6 107 57.9
PGR004G1760 Punica granatum HOM05D004664 ORTHO05D005526 1.8e-20 103.6 273 32.6
A08p25430 Brassica napus HOM05D004664 ORTHO05D005526 5.1e-20 102.1 201 36.8
unitig_22.g5707 Utricularia gibba HOM05D004664 ORTHO05D005526 5.1e-20 102.1 183 37.7
BraA08t34494Z Brassica rapa HOM05D004664 ORTHO05D005526 6.7e-20 101.7 202 36.6
CANSAT64G2239 Cannabis sativa HOM05D004664 ORTHO05D005526 6.7e-20 101.7 295 31.2
THA.LOC104809221 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 2.6e-19 99.8 212 35.8
Peaxi162Scf00530g00824 Petunia axillaris HOM05D004664 ORTHO05D005526 9.7e-19 97.8 156 43.6
TPR.G5994 Trifolium pratense HOM05D004664 ORTHO05D005526 1.3e-18 97.4 185 38.4
Ah.04g149850 Amaranthus hybridus HOM05D000997 ORTHO05D000828 2.8e-18 96.3 248 32.3
Sabra08G0019200 Salix brachista HOM05D004664 ORTHO05D005526 1.4e-17 94.0 279 30.8
CARHR028060 Cardamine hirsuta HOM05D004664 ORTHO05D005526 1.8e-17 93.6 222 32.0
CiPaw.09G112900 Carya illinoinensis HOM05D004664 ORTHO05D005526 1.8e-17 93.6 179 36.3
THA.LOC104803679 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 3.1e-17 92.8 211 35.5
Hund19039 Selenicereus undatus HOM05D004664 ORTHO05D005526 4.1e-17 92.4 194 36.1
Sp5g19680 Schrenkiella parvula HOM05D004664 ORTHO05D005526 9.1e-17 91.3 154 40.3
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 4.5e-16 89.0 92 53.3
CDE04G0808 Ceratophyllum demersum HOM05D004664 ORTHO05D005526 7.7e-16 88.2 221 33.5
RcHm_v2.0_Chr2g0153021 Rosa chinensis HOM05D004664 ORTHO05D005526 3.8e-15 85.9 99 49.5
FAN05G0490 Fragaria x ananassa HOM05D004664 ORTHO05D005526 5.0e-15 85.5 264 30.3
CSS0003336 Camellia sinensis var. sinensis HOM05D004664 ORTHO05D005526 6.5e-15 85.1 80 58.8
vmacro21384 Vaccinium macrocarpon HOM05D004664 ORTHO05D005526 8.5e-15 84.7 293 28.3
FvH4_6g39210 Fragaria vesca HOM05D004664 ORTHO05D005526 2.5e-14 83.2 123 41.5
FAN02G1202 Fragaria x ananassa HOM05D004664 ORTHO05D005526 4.2e-14 82.4 120 42.5
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 4.2e-14 82.4 277 29.2
Medtr8g042940 Medicago truncatula HOM05D004664 ORTHO05D005526 1.2e-13 80.9 191 35.6
SEGI_33972 Sequoiadendron giganteum HOM05D004664 ORTHO05D005526 1.2e-13 80.9 220 31.4
FAN14G0080 Fragaria x ananassa HOM05D004664 ORTHO05D005526 4.7e-13 79.0 120 40.0
ATR0751G240 Amborella trichopoda HOM05D004664 ORTHO05D005526 1.4e-12 77.4 165 36.4
ECA237G0001 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.4e-12 77.4 79 51.9
Actinidia19274 Actinidia chinensis HOM05D004664 ORTHO05D005526 2.3e-12 76.6 152 36.2
ClCG01G009110 Citrullus lanatus HOM05D004664 ORTHO05D005526 2.3e-12 76.6 177 33.9
Oeu016938.2 Olea europaea HOM05D004664 ORTHO05D005526 3.0e-12 76.3 90 50.0
DCAR_031515 Daucus carota HOM05D004664 ORTHO05D005526 5.2e-12 75.5 184 36.4
DCAR_024762 Daucus carota HOM05D004664 ORTHO05D005526 6.7e-12 75.1 338 27.5
Rhsim06G0067400 Rhododendron simsii HOM05D004664 ORTHO05D005526 6.7e-12 75.1 105 43.8
Actinidia04550 Actinidia chinensis HOM05D004664 ORTHO05D005526 2.4e-09 66.6 143 32.2
ECA238G4413 Erigeron canadensis HOM05D004664 ORTHO05D005526 5.3e-09 65.5 172 34.3
Eucgr.D00971 Eucalyptus grandis HOM05D004664 ORTHO05D005526 1.2e-08 64.3 147 34.7
Carub.0001s2702 Capsella rubella HOM05D004664 ORTHO05D005526 7.7e-08 61.6 123 35.0
CSS0008447 Camellia sinensis var. sinensis HOM05D004664 ORTHO05D005526 2.5e-06 56.6 46 56.5
Sed0026896 Sechium edule HOM05D004664 ORTHO05D005526 4.2e-06 55.8 139 31.7


User provided reference genes

Program Settings