Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 4.0e-193 677.9 348 100.0
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 7.7e-152 540.8 316 82.6
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 4.2e-150 535.0 316 82.6
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 9.4e-150 533.9 321 81.3
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 1.6e-149 533.1 314 81.8
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 2.0e-147 526.2 316 80.4
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 1.1e-145 520.4 336 75.6
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 6.9e-145 517.7 315 80.6
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 9.1e-145 517.3 314 80.6
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 9.1e-145 517.3 319 79.6
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 1.2e-144 516.9 317 80.1
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.7e-143 513.1 316 79.1
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 3.8e-143 511.9 314 80.3
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 5.0e-143 511.5 316 78.8
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 5.0e-143 511.5 315 78.7
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 2.5e-142 509.2 314 77.4
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 2.5e-142 509.2 317 78.9
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 1.6e-141 506.5 316 78.5
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 3.0e-140 502.3 316 77.8
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 5.1e-140 501.5 306 77.8
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 8.8e-140 500.7 336 72.0
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 2.0e-139 499.6 305 79.7
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 2.0e-139 499.6 306 79.1
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 2.6e-139 499.2 316 76.9
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 3.3e-139 498.8 313 78.3
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 9.7e-139 497.3 305 79.3
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 3.7e-138 495.4 312 77.6
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 3.7e-138 495.4 303 79.5
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 8.2e-138 494.2 312 77.6
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.8e-137 493.0 313 78.0
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 2.4e-137 492.7 316 77.2
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 5.3e-137 491.5 312 77.9
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 7.0e-137 491.1 316 75.6
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 9.1e-137 490.7 317 76.7
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 1.2e-136 490.3 316 75.9
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 3.5e-136 488.8 317 75.1
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 4.5e-136 488.4 319 75.9
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 5.9e-136 488.0 335 73.4
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 7.7e-136 487.6 311 76.5
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 2.2e-135 486.1 315 74.3
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 3.8e-135 485.3 319 75.9
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 3.8e-135 485.3 316 75.9
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 5.0e-135 485.0 312 74.4
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 5.5e-134 481.5 312 74.7
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 1.6e-133 479.9 315 74.6
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 2.7e-133 479.2 302 74.8
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 2.7e-133 479.2 317 75.1
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 2.7e-133 479.2 318 73.6
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 3.6e-133 478.8 312 74.0
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 8.0e-133 477.6 316 74.4
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 1.8e-132 476.5 314 73.2
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 8.8e-132 474.2 332 69.9
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 8.8e-132 474.2 312 72.8
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 1.1e-131 473.8 316 72.5
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 1.1e-131 473.8 316 72.8
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 5.7e-131 471.5 311 76.2
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 2.4e-129 466.1 314 74.5
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 3.5e-128 462.2 313 72.5
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 5.9e-128 461.5 318 72.6
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 2.9e-127 459.1 303 74.3
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 1.1e-126 457.2 316 69.6
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 5.5e-126 454.9 272 79.8
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 2.1e-125 453.0 304 73.0
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.7e-125 452.6 293 72.7
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 6.1e-125 451.4 314 71.3
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 1.8e-124 449.9 263 80.6
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 2.3e-124 449.5 311 71.7
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 2.3e-124 449.5 311 71.7
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 3.0e-124 449.1 306 70.9
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 4.0e-124 448.7 305 73.4
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 6.8e-124 448.0 305 71.5
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 1.5e-123 446.8 305 73.4
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 2.0e-123 446.4 308 72.7
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 3.4e-123 445.7 247 85.4
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 5.7e-123 444.9 284 73.6
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 9.8e-123 444.1 311 70.7
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 9.8e-123 444.1 311 70.7
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 9.8e-123 444.1 293 76.1
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 1.3e-122 443.7 311 70.7
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 1.7e-122 443.4 307 72.0
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 3.7e-122 442.2 305 71.1
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 6.3e-122 441.4 307 71.7
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 6.3e-122 441.4 307 70.7
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 4.1e-121 438.7 307 70.0
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 9.1e-121 437.6 315 69.2
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 4.5e-120 435.3 316 69.6
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 7.7e-120 434.5 314 69.7
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 1.3e-119 433.7 232 89.2
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 4.2e-118 428.7 313 68.1
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 8.0e-117 424.5 302 69.5
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 6.8e-116 421.4 294 71.1
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.4e-115 419.1 270 72.2
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 2.2e-114 416.4 320 66.6
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 6.3e-114 414.8 310 67.1
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 8.0e-109 397.9 232 78.9
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 1.8e-108 396.7 217 84.8
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 3.7e-106 389.0 308 63.0
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 4.6e-104 382.1 265 70.9
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 2.0e-99 366.7 313 60.1
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 7.3e-94 348.2 233 68.7
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 3.6e-93 345.9 301 58.5
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.8e-92 343.6 183 88.5
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.8e-92 343.6 183 88.5
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 7.6e-83 311.6 307 50.2
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 5.4e-81 305.4 225 68.0
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 1.1e-78 297.7 197 75.1
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 1.9e-73 280.4 211 64.5
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 3.1e-68 263.1 189 65.1
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 5.1e-63 245.7 150 80.0
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 9.6e-62 241.5 201 60.7
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 3.8e-42 176.4 166 51.8
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 1.0e-34 151.8 122 60.7
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 7.2e-33 145.6 78 84.6
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 1.7e-26 124.4 107 56.1
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 8.5e-18 95.5 59 76.3
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 1.3e-10 71.6 52 63.5
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 3.0e-07 60.5 167 28.1
BcaB08g36152 Brassica carinata HOM05D003204 ORTHO05D003566 5.2e-07 59.7 170 28.8
Sp6g19740 Schrenkiella parvula HOM05D003204 ORTHO05D003566 5.2e-07 59.7 167 29.9
C02p13650 Brassica napus HOM05D003204 ORTHO05D003566 8.8e-07 58.9 173 30.1
Sed0001393 Sechium edule HOM05D006818 ORTHO05D372820 8.8e-07 58.9 252 29.0
BcaC03g14125 Brassica carinata HOM05D003204 ORTHO05D003566 1.2e-06 58.5 167 29.9
BolC2t07477H Brassica oleracea HOM05D003204 ORTHO05D003566 1.2e-06 58.5 167 29.9
Atru.chr7.159 Acer truncatum HOM05D003204 ORTHO05D003566 1.5e-06 58.2 168 31.0
BcaC04g19909 Brassica carinata HOM05D003204 ORTHO05D003566 2.0e-06 57.8 172 27.9
C09p49990 Brassica napus HOM05D003204 ORTHO05D003566 2.0e-06 57.8 172 27.9
BolC9t57852H Brassica oleracea HOM05D003204 ORTHO05D003566 2.0e-06 57.8 172 27.9
BcaB01g04554 Brassica carinata HOM05D003204 ORTHO05D003566 3.4e-06 57.0 170 28.8
A02p07990 Brassica napus HOM05D003204 ORTHO05D003566 3.4e-06 57.0 167 29.3
A10p16100 Brassica napus HOM05D003204 ORTHO05D003566 3.4e-06 57.0 172 27.9
C02p13620 Brassica napus HOM05D003204 ORTHO05D003566 3.4e-06 57.0 167 29.3
C03p14580 Brassica napus HOM05D003204 ORTHO05D003566 3.4e-06 57.0 170 28.8
BolC3t13899H Brassica oleracea HOM05D003204 ORTHO05D003566 3.4e-06 57.0 170 28.8
BraA02t05872Z Brassica rapa HOM05D003204 ORTHO05D003566 3.4e-06 57.0 167 29.3
Ca_21107_v3 Cicer arietinum L. HOM05D003204 ORTHO05D003566 4.4e-06 56.6 170 25.9
Eucgr.C00377 Eucalyptus grandis HOM05D003204 ORTHO05D003566 4.4e-06 56.6 167 29.3
Eucgr.C04044 Eucalyptus grandis HOM05D003204 ORTHO05D003566 5.7e-06 56.2 167 27.5
Lalb_Chr07g0179701 Lupinus albus HOM05D003204 ORTHO05D003566 7.5e-06 55.8 167 28.1
Manes.14G141400 Manihot esculenta HOM05D003204 ORTHO05D003566 7.5e-06 55.8 179 27.9
A03p12410 Brassica napus HOM05D003204 ORTHO05D003566 9.8e-06 55.5 170 28.2
BraA03t10555Z Brassica rapa HOM05D003204 ORTHO05D003566 9.8e-06 55.5 170 28.2
Manes.06G038651 Manihot esculenta HOM05D003204 ORTHO05D003566 9.8e-06 55.5 168 28.6


User provided reference genes

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