Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000732001 Vitis vinifera HOM05D004774 ORTHO05D005514 1.1e-40 169.5 80 100.0
GSVIVG01000730001 Vitis vinifera HOM05D004774 ORTHO05D005514 4.6e-28 127.5 67 86.6
GSVIVG01011075001 Vitis vinifera HOM05D004774 ORTHO05D005514 4.6e-28 127.5 68 83.8
GSVIVG01018600001 Vitis vinifera HOM05D004774 ORTHO05D005514 3.7e-25 117.9 71 80.3
Nn1g02575 Nelumbo nucifera HOM05D004774 ORTHO05D005514 2.1e-20 102.1 67 61.2
Nn4g23666 Nelumbo nucifera HOM05D004774 ORTHO05D005514 2.7e-20 101.7 67 61.2
TAR636G0805 Trochodendron aralioides HOM05D004774 ORTHO05D005514 4.7e-20 100.9 68 61.8
GSVIVG01000736001 Vitis vinifera HOM05D004774 ORTHO05D005514 4.7e-20 100.9 48 97.9
Ca_26554_v3 Cicer arietinum L. HOM05D004774 ORTHO05D005514 7.9e-20 100.1 71 63.4
Cpa.g.sc52.135 Carica papaya HOM05D004774 ORTHO05D005514 1.4e-19 99.4 68 61.8
CAN.G1190.29 Capsicum annuum HOM05D004774 ORTHO05D005514 1.8e-19 99.0 67 64.2
Dinv22475 Davidia involucrata HOM05D004774 ORTHO05D005514 1.8e-19 99.0 67 62.7
VMungo0331G0358 Vigna mungo HOM05D002747 ORTHO05D005514 3.0e-19 98.2 68 61.8
Hma1.2p1_1029F.1_g249620 Hydrangea macrophylla HOM05D004774 ORTHO05D005514 5.1e-19 97.4 67 59.7
Hma1.2p1_1029F.1_g249641 Hydrangea macrophylla HOM05D004774 ORTHO05D005514 5.1e-19 97.4 67 59.7
Phvul.010G020150 Phaseolus vulgaris HOM05D004774 ORTHO05D005514 5.1e-19 97.4 68 61.8
Phvul.010G020200 Phaseolus vulgaris HOM05D004774 ORTHO05D005514 5.1e-19 97.4 68 61.8
GSVIVG01034583001 Vitis vinifera HOM05D004774 ORTHO05D005514 6.7e-19 97.1 51 92.2
Dinv40162 Davidia involucrata HOM05D004774 ORTHO05D005514 8.8e-19 96.7 67 62.7
Duzib211G0109 Durio zibethinus HOM05D004774 ORTHO05D005514 8.8e-19 96.7 75 58.7
Peaxi162Scf00934g00135 Petunia axillaris HOM05D004774 ORTHO05D005514 1.1e-18 96.3 67 62.7
QL08p045287 Quercus lobata HOM05D004774 ORTHO05D005514 1.1e-18 96.3 68 58.8
Solyc07g006240.4 Solanum lycopersicum HOM05D004774 ORTHO05D005514 1.1e-18 96.3 67 64.2
Sopen07g002340 Solanum pennellii HOM05D004774 ORTHO05D005514 1.1e-18 96.3 67 64.2
Prupe.2G103200 Prunus persica HOM05D004774 ORTHO05D005514 3.3e-18 94.7 68 57.4
Thecc.01G266900 Theobroma cacao HOM05D004774 ORTHO05D005514 4.4e-18 94.4 76 56.6
Nitab4.5_0003289g0060 Nicotiana tabacum HOM05D004774 ORTHO05D005514 5.7e-18 94.0 68 63.2
CANSAT35G0005 Cannabis sativa HOM05D004774 ORTHO05D005514 9.7e-18 93.2 66 63.6
Duzib138G0586 Durio zibethinus HOM05D004774 ORTHO05D005514 9.7e-18 93.2 76 56.6
Duzib211G0067 Durio zibethinus HOM05D004774 ORTHO05D005514 1.7e-17 92.4 75 57.3
arahy.Tifrunner.gnm1.ann1.SKV00U Arachis hypogaea HOM05D004774 ORTHO05D005514 2.2e-17 92.0 61 59.0
Glyma.03G218500 Glycine max HOM05D004774 ORTHO05D005514 3.7e-17 91.3 68 57.4
CiPaw.06G137100 Carya illinoinensis HOM05D004774 ORTHO05D005514 4.8e-17 90.9 68 54.4
Cc01_g18810 Coffea canephora HOM05D004774 ORTHO05D005514 4.8e-17 90.9 66 57.6
Atru.chr5.1584 Acer truncatum HOM05D004774 ORTHO05D005514 1.1e-16 89.7 67 61.2
Psat3g097920 Pisum sativum HOM05D004774 ORTHO05D005514 1.1e-16 89.7 65 66.2
Gohir.A07G209300 Gossypium hirsutum HOM05D004774 ORTHO05D005514 1.4e-16 89.4 76 53.9
Gorai.001G243200 Gossypium raimondii HOM05D004774 ORTHO05D005514 1.4e-16 89.4 76 53.9
MD08G1227600 Malus domestica HOM05D004774 ORTHO05D005514 1.4e-16 89.4 67 56.7
TWI12G1255 Tripterygium wilfordii HOM05D004774 ORTHO05D005514 1.4e-16 89.4 64 59.4
TPR.G27925 Trifolium pratense HOM05D004774 ORTHO05D005514 1.8e-16 89.0 62 62.9
Lj4g0014477 Lotus japonicus HOM05D004774 ORTHO05D005514 2.4e-16 88.6 62 61.3
Lalb_Chr17g0348441 Lupinus albus HOM05D004774 ORTHO05D005514 4.1e-16 87.8 70 58.6
COL.COLO4_05101 Corchorus olitorius HOM05D004774 ORTHO05D005514 5.3e-16 87.4 57 63.2
Gohir.D07G215400 Gossypium hirsutum HOM05D004774 ORTHO05D005514 5.3e-16 87.4 76 52.6
RcHm_v2.0_Chr5g0063451 Rosa chinensis HOM05D004774 ORTHO05D005514 5.3e-16 87.4 68 52.9
TWI18G0081 Tripterygium wilfordii HOM05D004774 ORTHO05D005514 7.0e-16 87.0 64 57.8
Manes.01G201400 Manihot esculenta HOM05D004774 ORTHO05D005514 1.2e-15 86.3 71 57.7
Potri.002G044500 Populus trichocarpa HOM05D004774 ORTHO05D005514 1.6e-15 85.9 67 55.2
Glyma.19G215300 Glycine max HOM05D004774 ORTHO05D005514 4.5e-15 84.3 67 55.2
MSTRG.18290 Avicennia marina HOM05D004774 ORTHO05D005514 5.9e-15 84.0 71 50.7
THA.LOC104815831 Tarenaya hassleriana HOM05D004774 ORTHO05D005514 1.0e-14 83.2 67 52.2
Cfa005024 Carpinus fangiana HOM05D004774 ORTHO05D005514 1.3e-14 82.8 68 51.5
FvH4_1g22880 Fragaria vesca HOM05D004774 ORTHO05D005514 1.3e-14 82.8 68 50.0
FAN19G2773 Fragaria x ananassa HOM05D004774 ORTHO05D005514 1.3e-14 82.8 68 50.0
Aqoxy1G01668 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 2.2e-14 82.0 61 55.7
Aqoxy4G03157 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 2.2e-14 82.0 61 55.7
Aqoxy7G03988 Aquilegia oxysepala HOM05D004774 ORTHO05D005514 2.2e-14 82.0 61 55.7
A09p66780 Brassica napus HOM05D004774 ORTHO05D005514 2.2e-14 82.0 68 52.9
BraA09t42016Z Brassica rapa HOM05D004774 ORTHO05D005514 2.2e-14 82.0 68 52.9
Haze_02361 Corylus avellana HOM05D004774 ORTHO05D005514 3.8e-14 81.3 74 48.6
Migut.D00377 Erythranthe guttata HOM05D004774 ORTHO05D005514 6.5e-14 80.5 71 54.9
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 8.5e-14 80.1 62 54.8
EL10Ac3g05825 Beta vulgaris HOM05D004774 ORTHO05D005514 8.5e-14 80.1 64 51.6
Medtr8g072680 Medicago truncatula HOM05D004774 ORTHO05D005514 8.5e-14 80.1 68 54.4
AL1G16800 Arabidopsis lyrata HOM05D004774 ORTHO05D005514 3.2e-13 78.2 69 49.3
C08p51000 Brassica napus HOM05D004774 ORTHO05D005514 3.2e-13 78.2 67 49.3
BolC8t52628H Brassica oleracea HOM05D004774 ORTHO05D005514 3.2e-13 78.2 67 49.3
CARHR006490 Cardamine hirsuta HOM05D004774 ORTHO05D005514 4.2e-13 77.8 67 49.3
A08p35880 Brassica napus HOM05D004774 ORTHO05D005514 5.5e-13 77.4 68 47.1
C08p02690 Brassica napus HOM05D004774 ORTHO05D005514 5.5e-13 77.4 68 47.1
BolC8t47065H Brassica oleracea HOM05D004774 ORTHO05D005514 5.5e-13 77.4 68 47.1
BraA08t35495Z Brassica rapa HOM05D004774 ORTHO05D005514 5.5e-13 77.4 68 47.1
FAN23G2064 Fragaria x ananassa HOM05D004774 ORTHO05D005514 7.2e-13 77.0 66 50.0
Sp1g05530 Schrenkiella parvula HOM05D004774 ORTHO05D005514 9.4e-13 76.6 69 46.4
Thhalv10028967m.g Eutrema salsugineum HOM05D004774 ORTHO05D005514 1.2e-12 76.3 69 50.7
Ah.11g042480 Amaranthus hybridus HOM05D004774 ORTHO05D005514 1.6e-12 75.9 71 52.1
AUR62002186 Chenopodium quinoa HOM05D004774 ORTHO05D005514 2.7e-12 75.1 64 51.6
PSO017G6900 Papaver somniferum HOM05D004774 ORTHO05D005514 4.7e-12 74.3 50 60.0
PGR119G0353 Punica granatum HOM05D004774 ORTHO05D005514 4.7e-12 74.3 44 68.2
Carub.0001s0611 Capsella rubella HOM05D004774 ORTHO05D005514 8.0e-12 73.6 67 46.3
PSO170G5180 Papaver somniferum HOM05D004774 ORTHO05D005514 1.0e-11 73.2 50 58.0
CSS0049587 Camellia sinensis var. sinensis HOM05D004774 ORTHO05D005514 3.0e-11 71.6 110 34.5
Lsat_1_v5_gn_5_176641 Lactuca sativa HOM05D004774 ORTHO05D005514 3.0e-11 71.6 68 50.0
DCAR_002682 Daucus carota HOM05D004774 ORTHO05D005514 5.2e-11 70.9 61 49.2
SGA_v2.0_scaffold138G35272 Striga asiatica HOM05D004774 ORTHO05D005514 5.2e-11 70.9 72 44.4
vmacro02628 Vaccinium macrocarpon HOM05D004774 ORTHO05D005514 5.2e-11 70.9 101 37.6
MBI04_g06856_MAGBIO Magnolia biondii HOM05D004774 ORTHO05D005514 6.7e-11 70.5 63 54.0
AagrBONN_evm.TU.Sc2ySwM_344.4376 Anthoceros agrestis HOM05D004774 ORTHO05D005514 1.5e-10 69.3 65 44.6
CsaV3_7G030220 Cucumis sativus L. HOM05D004774 ORTHO05D005514 1.5e-10 69.3 84 44.0
SMO012G0037 Selaginella moellendorffii HOM05D004774 ORTHO05D005514 1.5e-10 69.3 66 40.9
HanXRQChr14g0454071 Helianthus annuus HOM05D004774 ORTHO05D005514 2.6e-10 68.6 68 48.5
Nitab4.5_0001427g0080 Nicotiana tabacum HOM05D004774 ORTHO05D005514 3.3e-10 68.2 53 62.3
VMungo1309G2525 Vigna mungo HOM05D004774 ORTHO05D005514 3.3e-10 68.2 53 56.6
Rhsim13G0031100 Rhododendron simsii HOM05D004774 ORTHO05D005514 9.7e-10 66.6 108 36.1
PGSC0003DMG400011166 Solanum tuberosum HOM05D004774 ORTHO05D005514 9.7e-10 66.6 52 57.7
ClCG09G004860 Citrullus lanatus HOM05D004774 ORTHO05D005514 1.7e-09 65.9 84 35.7
HPP92_027004 Vanilla planifolia HOM05D004774 ORTHO05D005514 1.7e-09 65.9 62 45.2
Lj4A469T40 Lonicera japonica HOM05D004774 ORTHO05D005514 2.2e-09 65.5 43 72.1
HPP92_015388 Vanilla planifolia HOM05D004774 ORTHO05D005514 2.8e-09 65.1 62 43.5
ECA247G2354 Erigeron canadensis HOM05D002220 ORTHO05D008182 3.7e-09 64.7 66 48.5
Sed0022653 Sechium edule HOM05D004774 ORTHO05D005514 3.7e-09 64.7 78 35.9
MD02G1234500 Malus domestica HOM05D004774 ORTHO05D005514 6.3e-09 63.9 37 70.3
Pp3c7_17850 Physcomitrium patens HOM05D004774 ORTHO05D005514 6.3e-09 63.9 62 41.9
Sc04g0000740 Simmondsia chinensis HOM05D004774 ORTHO05D005514 1.8e-08 62.4 37 67.6
Mapoly0050s0102 Marchantia polymorpha HOM05D004774 ORTHO05D005514 2.4e-08 62.0 63 44.4
unitig_0.g1128 Utricularia gibba HOM05D004774 ORTHO05D005514 5.3e-08 60.8 96 34.4
SMO298G0040 Selaginella moellendorffii HOM05D004774 ORTHO05D005514 7.0e-08 60.5 46 50.0
Ciclev10023915m.g Citrus clementina HOM05D004774 ORTHO05D005514 1.2e-07 59.7 51 52.9
SEGI_34955 Sequoiadendron giganteum HOM05D004774 ORTHO05D005514 1.2e-07 59.7 62 38.7
Os07g0477000 Oryza sativa ssp. japonica HOM05D004774 ORTHO05D005514 1.6e-07 59.3 50 50.0
MELO3C023634.2 Cucumis melo HOM05D004774 ORTHO05D005514 2.0e-07 58.9 77 42.9
CBR_g31683 Chara braunii HOM05D004774 ORTHO05D005514 2.7e-07 58.5 44 50.0
Prupe.7G016800 Prunus persica HOM05D004774 ORTHO05D005514 1.0e-06 56.6 46 50.0
A03p16490 Brassica napus HOM05D037327 ORTHO05D005514 2.2e-06 55.5 33 66.7
Eucgr.B01492 Eucalyptus grandis HOM05D004774 ORTHO05D005514 2.9e-06 55.1 38 68.4
FAN26G2874 Fragaria x ananassa HOM05D004774 ORTHO05D005514 5.0e-06 54.3 51 47.1


User provided reference genes

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