Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000253001 Vitis vinifera HOM05D003684 ORTHO05D004428 4.0e-287 990.7 494 100.0
Thecc.07G170900 Theobroma cacao HOM05D003684 ORTHO05D004428 1.2e-230 803.1 467 86.3
Duzib187G1616 Durio zibethinus HOM05D003684 ORTHO05D004428 3.8e-229 798.1 467 85.9
Duzib213G0690 Durio zibethinus HOM05D003684 ORTHO05D004428 1.4e-228 796.2 467 85.2
COL.COLO4_36995 Corchorus olitorius HOM05D003684 ORTHO05D004428 4.6e-227 791.2 467 85.4
Gohir.A01G097200 Gossypium hirsutum HOM05D003684 ORTHO05D004428 1.5e-225 786.2 467 84.6
Gorai.002G106900 Gossypium raimondii HOM05D003684 ORTHO05D004428 1.6e-224 782.7 467 84.2
Atru.chr3.1442 Acer truncatum HOM05D003684 ORTHO05D004428 2.1e-224 782.3 468 82.9
Ciclev10024915m.g Citrus clementina HOM05D003684 ORTHO05D004428 3.7e-224 781.6 465 84.1
Gohir.D01G081800 Gossypium hirsutum HOM05D003684 ORTHO05D004428 4.8e-224 781.2 467 84.2
TAR381G1133 Trochodendron aralioides HOM05D003684 ORTHO05D004428 3.4e-222 775.0 467 82.7
Manes.13G154400 Manihot esculenta HOM05D003684 ORTHO05D004428 1.0e-221 773.5 471 83.7
CsaV3_2G019660 Cucumis sativus L. HOM05D003684 ORTHO05D004428 8.4e-221 770.4 476 82.1
Sed0026164 Sechium edule HOM05D003684 ORTHO05D004428 8.4e-221 770.4 476 81.5
Potri.004G135800 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.3e-218 763.1 467 83.3
Actinidia19941 Actinidia chinensis HOM05D003684 ORTHO05D004428 6.3e-216 754.2 466 80.0
Cfa020930 Carpinus fangiana HOM05D003684 ORTHO05D004428 7.2e-212 740.7 467 81.8
Sabra04G0082300 Salix brachista HOM05D003684 ORTHO05D004428 1.2e-211 740.0 484 79.5
RcHm_v2.0_Chr3g0485021 Rosa chinensis HOM05D003684 ORTHO05D004428 4.6e-211 738.0 467 80.3
Aqoxy5G02639 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 1.3e-210 736.5 468 78.0
Lalb_Chr06g0168741 Lupinus albus HOM05D003684 ORTHO05D004428 6.7e-210 734.2 469 80.2
TWI31G1361 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 6.7e-210 734.2 476 78.8
FvH4_1g25880 Fragaria vesca HOM05D003684 ORTHO05D004428 2.5e-209 732.3 467 79.2
Lj5g0014818 Lotus japonicus HOM05D003684 ORTHO05D004428 2.5e-209 732.3 469 78.3
Dinv26831 Davidia involucrata HOM05D003684 ORTHO05D004428 5.7e-209 731.1 429 86.5
VMungo0720G1706 Vigna mungo HOM05D003684 ORTHO05D004428 1.1e-207 726.9 469 78.7
Potri.T044700 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.4e-207 726.5 467 79.9
CiPaw.16G119400 Carya illinoinensis HOM05D003684 ORTHO05D004428 2.4e-207 725.7 464 80.0
Potri.018G145560 Populus trichocarpa HOM05D003684 ORTHO05D004428 4.1e-207 724.9 467 79.2
Hund21769 Selenicereus undatus HOM05D003684 ORTHO05D004428 4.1e-207 724.9 473 78.6
Glyma.20G214600 Glycine max HOM05D003684 ORTHO05D004428 9.1e-207 723.8 483 77.0
Glyma.10G175900 Glycine max HOM05D003684 ORTHO05D004428 2.6e-206 722.2 483 77.0
EL10Ac4g09714 Beta vulgaris HOM05D003684 ORTHO05D004428 5.9e-206 721.1 466 77.9
FAN23G1204 Fragaria x ananassa HOM05D003684 ORTHO05D004428 5.9e-206 721.1 467 78.4
FAN26G1029 Fragaria x ananassa HOM05D003684 ORTHO05D004428 2.2e-205 719.2 474 77.4
FAN28G1615 Fragaria x ananassa HOM05D003684 ORTHO05D004428 6.5e-205 717.6 467 78.2
AUR62000586 Chenopodium quinoa HOM05D003684 ORTHO05D004428 8.5e-205 717.2 473 77.0
Phvul.004G132300 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 8.5e-205 717.2 468 78.6
PGR119G1631 Punica granatum HOM05D003684 ORTHO05D004428 1.9e-204 716.1 470 79.4
Ah.06g188290 Amaranthus hybridus HOM05D003684 ORTHO05D004428 3.2e-204 715.3 487 73.9
CiPaw.15G185900 Carya illinoinensis HOM05D003684 ORTHO05D004428 3.2e-204 715.3 471 79.0
VMungo0464G0733 Vigna mungo HOM05D003684 ORTHO05D004428 3.2e-204 715.3 468 78.4
Phvul.007G114500 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 4.2e-204 714.9 475 76.8
Glyma.09G157300 Glycine max HOM05D003684 ORTHO05D004428 7.2e-204 714.1 486 76.3
Lalb_Chr02g0149761 Lupinus albus HOM05D003684 ORTHO05D004428 2.1e-203 712.6 469 77.4
TPR.G16631 Trifolium pratense HOM05D003684 ORTHO05D004428 6.1e-203 711.1 482 75.1
CANSAT54G1806 Cannabis sativa HOM05D003684 ORTHO05D004428 3.0e-202 708.8 458 79.0
FAN19G3168 Fragaria x ananassa HOM05D003684 ORTHO05D004428 2.6e-201 705.7 459 78.2
Ca_09907_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 2.8e-200 702.2 483 75.6
Psat6g111880 Pisum sativum HOM05D003684 ORTHO05D004428 8.2e-200 700.7 468 76.7
TWI79G1581 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 1.4e-199 699.9 481 75.9
Glyma.16G207900 Glycine max HOM05D003684 ORTHO05D004428 2.4e-199 699.1 477 76.1
THA.LOC104800528 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 2.0e-198 696.0 469 74.6
MD15G1140800 Malus domestica HOM05D003684 ORTHO05D004428 5.9e-198 694.5 505 72.9
Solyc05g056340.3 Solanum lycopersicum HOM05D003684 ORTHO05D004428 1.7e-197 693.0 466 74.7
CARHR204550 Cardamine hirsuta HOM05D003684 ORTHO05D004428 3.8e-197 691.8 468 75.4
Sopen05g034730 Solanum pennellii HOM05D003684 ORTHO05D004428 4.2e-196 688.3 466 74.5
Medtr1g077090 Medicago truncatula HOM05D003684 ORTHO05D004428 6.1e-195 684.5 435 78.6
Thhalv10012626m.g Eutrema salsugineum HOM05D003684 ORTHO05D004428 1.8e-194 682.9 474 73.8
Oeu063702.1 Olea europaea HOM05D003684 ORTHO05D004428 3.0e-194 682.2 466 74.5
arahy.Tifrunner.gnm1.ann1.88FPG1 Arachis hypogaea HOM05D003684 ORTHO05D004428 1.5e-193 679.9 475 74.3
AT5G08450 Arabidopsis thaliana HOM05D003684 ORTHO05D004428 3.3e-193 678.7 474 74.5
Lalb_Chr21g0311771 Lupinus albus HOM05D003684 ORTHO05D004428 4.4e-193 678.3 467 75.4
MSTRG.23231 Avicennia marina HOM05D003684 ORTHO05D004428 1.7e-192 676.4 465 73.5
SGA_v2.0_scaffold12G06270 Striga asiatica HOM05D003684 ORTHO05D004428 4.8e-192 674.9 472 74.2
arahy.Tifrunner.gnm1.ann1.554WMS Arachis hypogaea HOM05D003684 ORTHO05D004428 8.2e-192 674.1 475 74.1
Rhsim10G0125000 Rhododendron simsii HOM05D003684 ORTHO05D004428 1.8e-191 672.9 612 60.6
Migut.M00001 Erythranthe guttata HOM05D003684 ORTHO05D004428 3.1e-191 672.2 466 73.4
PSO170G2972 Papaver somniferum HOM05D003684 ORTHO05D004428 9.1e-191 670.6 465 73.3
AL6G18920 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 5.9e-190 667.9 471 73.9
CAN.G1156.25 Capsicum annuum HOM05D003684 ORTHO05D004428 1.7e-189 666.4 515 66.8
arahy.Tifrunner.gnm1.ann1.XFQ1DZ Arachis hypogaea HOM05D003684 ORTHO05D004428 8.5e-189 664.1 477 74.4
PSO782G3749 Papaver somniferum HOM05D003684 ORTHO05D004428 1.5e-188 663.3 464 72.6
Aa31LG3G18080 Aethionema arabicum HOM05D003684 ORTHO05D004428 4.2e-188 661.8 472 71.6
Sp6g34450 Schrenkiella parvula HOM05D003684 ORTHO05D004428 2.7e-187 659.1 474 72.2
Carub.0006s0737 Capsella rubella HOM05D003684 ORTHO05D004428 1.8e-186 656.4 490 70.8
Ca_25251_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 1.8e-186 656.4 492 71.1
Nitab4.5_0000496g0270 Nicotiana tabacum HOM05D003684 ORTHO05D004428 1.2e-185 653.7 459 72.3
unitig_736.g22645 Utricularia gibba HOM05D003684 ORTHO05D004428 8.2e-184 647.5 455 71.9
unitig_899.g14642 Utricularia gibba HOM05D003684 ORTHO05D004428 2.4e-183 646.0 460 71.5
Lj2g0008338 Lotus japonicus HOM05D003684 ORTHO05D004428 9.1e-183 644.0 468 71.8
BcaB01g05594 Brassica carinata HOM05D003684 ORTHO05D004428 1.2e-182 643.7 457 73.3
CDE08G0027 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 1.2e-182 643.7 468 69.7
DCAR_009623 Daucus carota HOM05D003684 ORTHO05D004428 1.7e-181 639.8 414 77.3
HanXRQChr11g0336971 Helianthus annuus HOM05D003684 ORTHO05D004428 1.2e-179 633.6 459 71.9
Cpa.g.sc138.52 Carica papaya HOM05D003684 ORTHO05D004428 2.7e-179 632.5 362 85.1
Medtr6g065070 Medicago truncatula HOM05D003684 ORTHO05D004428 6.1e-179 631.3 467 70.2
AUR62006943 Chenopodium quinoa HOM05D003684 ORTHO05D004428 1.4e-178 630.2 509 64.4
Peaxi162Scf00819g00027 Petunia axillaris HOM05D003684 ORTHO05D004428 1.2e-177 627.1 488 68.4
A03p03860 Brassica napus HOM05D003684 ORTHO05D004428 5.7e-177 624.8 494 69.2
BolC3t12968H Brassica oleracea HOM05D003684 ORTHO05D004428 7.5e-177 624.4 491 69.2
BraA03t09733Z Brassica rapa HOM05D003684 ORTHO05D004428 3.7e-176 622.1 503 67.6
Lsat_1_v5_gn_1_130380 Lactuca sativa HOM05D003684 ORTHO05D004428 2.4e-175 619.4 463 70.8
Sc09g0001960 Simmondsia chinensis HOM05D003684 ORTHO05D004428 2.4e-175 619.4 343 87.2
C03p04350 Brassica napus HOM05D003684 ORTHO05D004428 4.1e-175 618.6 496 68.1
Nitab4.5_0006957g0020 Nicotiana tabacum HOM05D003684 ORTHO05D004428 2.0e-174 616.3 436 71.8
Psat0s3859g0040 Pisum sativum HOM05D003684 ORTHO05D004428 3.5e-174 615.5 488 66.6
Prupe.4G280600 Prunus persica HOM05D003684 ORTHO05D004428 8.6e-173 610.9 372 84.7
Sabra19G0000700 Salix brachista HOM05D003684 ORTHO05D004428 1.1e-172 610.5 370 81.6
TPR.G40356 Trifolium pratense HOM05D003684 ORTHO05D004428 5.5e-172 608.2 484 66.3
THA.LOC104818396 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 9.5e-172 607.4 436 71.3
Os07g0477500 Oryza sativa ssp. japonica HOM05D003684 ORTHO05D004428 1.6e-171 606.7 466 67.4
vmacro12735 Vaccinium macrocarpon HOM05D003684 ORTHO05D004428 2.0e-169 599.7 678 52.1
Zm00001eb108610 Zea mays HOM05D003684 ORTHO05D004428 6.3e-168 594.7 469 66.3
ECA248G2431 Erigeron canadensis HOM05D003684 ORTHO05D004428 5.4e-167 591.7 481 64.9
Sabra19G0012100 Salix brachista HOM05D003684 ORTHO05D004428 5.4e-167 591.7 370 79.7
Zm00001eb178520 Zea mays HOM05D003684 ORTHO05D004428 1.6e-166 590.1 468 65.2
ClCG02G000160 Citrullus lanatus HOM05D003684 ORTHO05D004428 2.0e-166 589.7 468 68.2
HPP92_003712 Vanilla planifolia HOM05D003684 ORTHO05D004428 5.6e-164 581.6 470 62.8
Peaxi162Scf00353g00740 Petunia axillaris HOM05D003684 ORTHO05D004428 1.4e-162 577.0 433 69.1
SalBow8G3946 Salvia bowleyana HOM05D003684 ORTHO05D004428 1.8e-162 576.6 406 70.9
Cc07_g19760 Coffea canephora HOM05D003684 ORTHO05D004428 1.2e-158 563.9 343 77.6
BcaB08g37259 Brassica carinata HOM05D003684 ORTHO05D004428 2.3e-157 559.7 448 65.4
C09p68560 Brassica napus HOM05D003684 ORTHO05D004428 3.1e-154 549.3 388 71.6
BraA10t44878Z Brassica rapa HOM05D003684 ORTHO05D004428 3.1e-154 549.3 364 75.8
AL6G19100 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 3.5e-150 535.8 568 54.6
Actinidia36575 Actinidia chinensis HOM05D003684 ORTHO05D004428 3.0e-149 532.7 412 68.4
A10p28300 Brassica napus HOM05D003684 ORTHO05D004428 5.2e-146 521.9 378 70.6
Sc06g0005260 Simmondsia chinensis HOM05D003684 ORTHO05D004428 1.2e-145 520.8 460 60.0
ATR1136G078 Amborella trichopoda HOM05D003684 ORTHO05D004428 1.9e-143 513.5 353 70.5
DCAR_019948 Daucus carota HOM05D003684 ORTHO05D004428 8.4e-136 488.0 427 58.3
Lj2C616G3 Lonicera japonica HOM05D003684 ORTHO05D004428 1.9e-135 486.9 322 77.3
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 9.2e-135 484.6 368 68.5
Oeu034404.1 Olea europaea HOM05D003684 ORTHO05D004428 3.9e-133 479.2 299 78.9
SHI11408 Sapria himalayana HOM05D003684 ORTHO05D004428 1.2e-126 457.6 456 55.7
MBI03_g18673_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 4.3e-124 449.1 278 80.2
HPP92_007640 Vanilla planifolia HOM05D003684 ORTHO05D004428 1.6e-123 447.2 359 60.2
Pp3c3_32800 Physcomitrium patens HOM05D003684 ORTHO05D004428 8.4e-120 434.9 427 53.9
Potri.T044400 Populus trichocarpa HOM05D003684 ORTHO05D004428 4.6e-118 429.1 280 78.6
SMO356G0426 Selaginella moellendorffii HOM05D003684 ORTHO05D004428 6.7e-117 425.2 462 51.1
Pp3c8_5360 Physcomitrium patens HOM05D003684 ORTHO05D004428 2.5e-116 423.3 441 53.7
Pp3c3_30960 Physcomitrium patens HOM05D003684 ORTHO05D004428 2.2e-112 410.2 432 51.9
Mapoly0050s0019 Marchantia polymorpha HOM05D003684 ORTHO05D004428 4.2e-111 406.0 503 48.1
AagrBONN_evm.TU.Sc2ySwM_228.5259 Anthoceros agrestis HOM05D003684 ORTHO05D004428 6.0e-110 402.1 448 48.7
Potri.018G145546 Populus trichocarpa HOM05D003684 ORTHO05D004428 4.8e-107 392.5 241 82.6
Nn1g08436 Nelumbo nucifera HOM05D003684 ORTHO05D004428 1.4e-106 391.0 311 67.5
SGA_v2.0_scaffold51G18855 Striga asiatica HOM05D003684 ORTHO05D004428 5.3e-98 362.5 391 51.4
MSTRG.2470 Avicennia marina HOM05D003684 ORTHO05D004428 5.0e-96 355.9 251 74.1
HPP92_003711 Vanilla planifolia HOM05D003684 ORTHO05D004428 1.3e-88 331.3 303 57.1
CSS0049380 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 5.5e-87 325.9 269 64.3
Ciclev10026566m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.6e-86 324.3 190 85.8
MSTRG.2469 Avicennia marina HOM05D003684 ORTHO05D004428 4.5e-81 306.2 197 75.1
CBR_g645 Chara braunii HOM05D003684 ORTHO05D004428 3.9e-77 293.1 411 41.4
CDE02G3840 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 4.2e-71 273.1 183 74.3
Cc07_g19750 Coffea canephora HOM05D003684 ORTHO05D004428 4.5e-65 253.1 187 69.5
CDE02G3206 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 2.9e-64 250.4 261 53.3
MCO05G109 Micromonas commoda HOM05D003684 ORTHO05D004428 2.5e-63 247.3 440 36.1
Cre03.g182600 Chlamydomonas reinhardtii HOM05D003684 ORTHO05D004428 2.0e-60 237.7 324 39.5
HanXRQChr01g0009441 Helianthus annuus HOM05D003684 ORTHO05D004428 2.6e-60 237.3 194 65.5
MBI01_g42406_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 2.8e-59 233.8 152 76.3
Cc07_g19740 Coffea canephora HOM05D003684 ORTHO05D004428 2.3e-53 214.2 148 66.2
Mapoly0024s0027 Marchantia polymorpha HOM05D003684 ORTHO05D004428 4.5e-49 199.9 364 38.5
Aqoxy391s001 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 1.3e-48 198.4 101 95.0
Lj2C616T2 Lonicera japonica HOM05D003684 ORTHO05D004428 2.5e-47 194.1 213 58.7
PRCOL_00004531 Prasinoderma coloniale HOM05D003684 ORTHO05D028742 4.7e-46 189.9 323 36.2
Cc00_g24540 Coffea canephora HOM05D003684 ORTHO05D004428 5.6e-39 166.4 85 89.4
CSS0015943 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 7.8e-33 146.0 97 77.3
MELO3C023205.2 Cucumis melo HOM05D003684 ORTHO05D004428 2.1e-30 137.9 107 68.2
Cpa.g.sc138.51 Carica papaya HOM05D003684 ORTHO05D004428 1.4e-26 125.2 96 65.6
HanXRQChr17g0567611 Helianthus annuus HOM05D003684 ORTHO05D004428 3.0e-24 117.5 63 87.3
Lsat_1_v5_gn_6_89680 Lactuca sativa HOM05D003684 ORTHO05D004428 3.9e-24 117.1 137 51.8
Sabra01G0044800 Salix brachista HOM05D003684 ORTHO05D004428 1.9e-23 114.8 65 84.6
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 7.3e-23 112.8 127 54.3
CSS0003103 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 1.2e-22 112.1 66 80.3
PGSC0003DMG400023330 Solanum tuberosum HOM05D003684 ORTHO05D004428 6.8e-21 106.3 97 61.9
SEGI_34739 Sequoiadendron giganteum HOM05D003684 ORTHO05D004428 7.6e-20 102.8 65 75.4
CSS0033146 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 9.9e-20 102.4 60 78.3
Oeu034403.1 Olea europaea HOM05D003684 ORTHO05D004428 1.4e-18 98.6 97 54.6
Sabra19G0011700 Salix brachista HOM05D003684 ORTHO05D004428 2.3e-16 91.3 99 57.6
Haze_19362 Corylus avellana HOM05D003684 ORTHO05D004428 3.0e-16 90.9 120 50.8
ATR1136G068 Amborella trichopoda HOM05D003684 ORTHO05D004428 5.3e-13 80.1 96 52.1
EL10Ac2g03383 Beta vulgaris HOM05D000039 ORTHO05D001729 2.2e-11 74.7 59 64.4
arahy.Tifrunner.gnm1.ann1.32AA53 Arachis hypogaea HOM05D003684 ORTHO05D001254 1.1e-10 72.4 52 69.2
Potri.018G145552 Populus trichocarpa HOM05D003684 ORTHO05D004428 2.4e-10 71.2 39 92.3
Ciclev10003442m.g Citrus clementina HOM05D003684 ORTHO05D004428 7.1e-10 69.7 47 74.5
EL10Ac9g22716 Beta vulgaris HOM05D003684 ORTHO05D004428 3.5e-09 67.4 32 87.5
Ciclev10003579m.g Citrus clementina HOM05D003684 ORTHO05D004428 2.3e-08 64.7 56 62.5
Cfa001622 Carpinus fangiana HOM05D003684 ORTHO05D125656 6.2e-06 56.6 154 26.6


User provided reference genes

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