Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g06490 Fragaria vesca HOM05D002447 ORTHO05D001298 5.2e-49 197.6 113 100.0
FvH4_4g10240 Fragaria vesca HOM05D002447 ORTHO05D001298 6.5e-36 154.1 113 82.3
FAN17G1303 Fragaria x ananassa HOM05D002447 ORTHO05D001298 3.1e-30 135.2 117 76.9
FvH4_3g22350 Fragaria vesca HOM05D002447 ORTHO05D001298 1.9e-27 125.9 109 77.1
FAN07G1995 Fragaria x ananassa HOM05D002447 ORTHO05D001298 2.5e-27 125.6 117 71.8
FvH4_4g34030 Fragaria vesca HOM05D002447 ORTHO05D001298 4.3e-27 124.8 113 69.9
FAN09G2477 Fragaria x ananassa HOM05D002447 ORTHO05D001298 7.5e-24 114.0 113 66.4
FvH4_4g16250 Fragaria vesca HOM05D002447 ORTHO05D001298 9.8e-24 113.6 110 74.5
FAN08G1022 Fragaria x ananassa HOM05D002447 ORTHO05D001298 3.2e-22 108.6 111 64.9
FvH4_4g34011 Fragaria vesca HOM05D002447 ORTHO05D001298 1.6e-18 96.3 77 68.8
RcHm_v2.0_Chr4g0443521 Rosa chinensis HOM05D002447 ORTHO05D001298 1.8e-17 92.8 113 61.1
Prupe.1G330600 Prunus persica HOM05D002447 ORTHO05D001298 1.1e-11 73.6 113 50.4
CiPaw.05G193400 Carya illinoinensis HOM05D002447 ORTHO05D001298 3.3e-11 72.0 113 49.6
Solyc04g007890.3 Solanum lycopersicum HOM05D002447 ORTHO05D001298 4.3e-11 71.6 125 44.8
Sopen04g003030 Solanum pennellii HOM05D002447 ORTHO05D001298 4.3e-11 71.6 125 44.8
GSVIVG01034730001 Vitis vinifera HOM05D002447 ORTHO05D001298 5.6e-11 71.2 114 44.7
GSVIVG01011701001 Vitis vinifera HOM05D002447 ORTHO05D001298 9.5e-11 70.5 113 47.8
Psat0s1687g0040 Pisum sativum HOM05D002447 ORTHO05D001298 3.6e-10 68.6 81 53.1
Manes.17G080900 Manihot esculenta HOM05D002447 ORTHO05D001298 8.1e-10 67.4 76 56.6
Sed0021982 Sechium edule HOM05D002447 ORTHO05D001298 8.1e-10 67.4 104 46.2
COL.COLO4_10157 Corchorus olitorius HOM05D002447 ORTHO05D001298 1.4e-09 66.6 106 45.3
Haze_10937 Corylus avellana HOM05D002447 ORTHO05D001298 1.4e-09 66.6 113 50.4
Manes.01G118200 Manihot esculenta HOM05D002447 ORTHO05D001298 2.3e-09 65.9 76 53.9
GSVIVG01016119001 Vitis vinifera HOM05D002447 ORTHO05D001298 2.3e-09 65.9 111 46.8
Lj6g0008513 Lotus japonicus HOM05D002447 ORTHO05D001298 4.0e-09 65.1 84 47.6
arahy.Tifrunner.gnm1.ann1.2Z77FC Arachis hypogaea HOM05D002447 ORTHO05D001298 5.2e-09 64.7 110 44.5
TWI74G0932 Tripterygium wilfordii HOM05D002447 ORTHO05D001298 1.2e-08 63.5 75 53.3
Cfa014986 Carpinus fangiana HOM05D002447 ORTHO05D001298 1.5e-08 63.2 113 48.7
Nitab4.5_0010650g0010 Nicotiana tabacum HOM05D002447 ORTHO05D001298 1.5e-08 63.2 116 42.2
HanXRQChr15g0476791 Helianthus annuus HOM05D002447 ORTHO05D001298 2.6e-08 62.4 88 46.6
Sp1g13340 Schrenkiella parvula HOM05D002447 ORTHO05D001298 2.6e-08 62.4 120 42.5
TWI77G0347 Tripterygium wilfordii HOM05D002447 ORTHO05D001298 2.6e-08 62.4 113 41.6
Hma1.2p1_0158F.1_g070210 Hydrangea macrophylla HOM05D002447 ORTHO05D001298 3.4e-08 62.0 111 44.1
CANSAT01G0504 Cannabis sativa HOM05D002447 ORTHO05D001298 4.4e-08 61.6 114 43.0
Ciclev10016374m.g Citrus clementina HOM05D002447 ORTHO05D001298 4.4e-08 61.6 116 51.7
Gorai.001G201200 Gossypium raimondii HOM05D002447 ORTHO05D001298 5.8e-08 61.2 108 43.5
Atru.chr11.635 Acer truncatum HOM05D002447 ORTHO05D001298 9.9e-08 60.5 116 45.7
Peaxi162Scf00723g00045 Petunia axillaris HOM05D002447 ORTHO05D001298 9.9e-08 60.5 115 40.0
QL03p034015 Quercus lobata HOM05D002447 ORTHO05D001298 9.9e-08 60.5 112 45.5
Gohir.A07G173200 Gossypium hirsutum HOM05D002447 ORTHO05D001298 1.7e-07 59.7 106 42.5
Lalb_Chr10g0104371 Lupinus albus HOM05D002447 ORTHO05D001298 1.7e-07 59.7 78 52.6
PGSC0003DMG400029519 Solanum tuberosum HOM05D002447 ORTHO05D001298 1.7e-07 59.7 122 41.0
Gohir.D07G180000 Gossypium hirsutum HOM05D002447 ORTHO05D001298 2.2e-07 59.3 108 42.6
Potri.010G109600 Populus trichocarpa HOM05D002447 ORTHO05D001298 2.2e-07 59.3 111 40.5
TWI53G0855 Tripterygium wilfordii HOM05D002447 ORTHO05D001298 2.9e-07 58.9 84 48.8
CiPaw.06G049000 Carya illinoinensis HOM05D002447 ORTHO05D001298 3.7e-07 58.5 113 47.8
Gohir.A12G151300 Gossypium hirsutum HOM05D002447 ORTHO05D001298 3.7e-07 58.5 106 47.2
Potri.004G087500 Populus trichocarpa HOM05D002447 ORTHO05D001298 3.7e-07 58.5 75 49.3
arahy.Tifrunner.gnm1.ann1.7X1Y1S Arachis hypogaea HOM05D002447 ORTHO05D001298 4.9e-07 58.2 110 41.8
unitig_899.g15632 Utricularia gibba HOM05D002447 ORTHO05D001298 4.9e-07 58.2 115 44.3
ClCG01G006370 Citrullus lanatus HOM05D002447 ORTHO05D001298 6.4e-07 57.8 113 46.9
Dinv28051 Davidia involucrata HOM05D002447 ORTHO05D001298 1.4e-06 56.6 114 46.5
FvH4_1g28760 Fragaria vesca HOM05D002447 ORTHO05D001298 1.9e-06 56.2 109 41.3
FAN19G0233 Fragaria x ananassa HOM05D002447 ORTHO05D001298 1.9e-06 56.2 109 41.3
Duzib211G0031 Durio zibethinus HOM05D002447 ORTHO05D001298 2.4e-06 55.8 106 39.6
Nitab4.5_0000916g0110 Nicotiana tabacum HOM05D002447 ORTHO05D001298 2.4e-06 55.8 116 49.1
Potri.017G129400 Populus trichocarpa HOM05D002447 ORTHO05D001298 2.4e-06 55.8 75 45.3
Cpa.g.sc844.1 Carica papaya HOM05D002447 ORTHO05D001298 3.2e-06 55.5 113 45.1
Ciclev10012880m.g Citrus clementina HOM05D002447 ORTHO05D001298 3.2e-06 55.5 105 49.5
Gohir.D12G155000 Gossypium hirsutum HOM05D002447 ORTHO05D001298 3.2e-06 55.5 106 42.5
Gorai.008G167300 Gossypium raimondii HOM05D002447 ORTHO05D001298 3.2e-06 55.5 106 48.1
Gorai.008G167400 Gossypium raimondii HOM05D002447 ORTHO05D001298 3.2e-06 55.5 106 42.5
Duzib138G0960 Durio zibethinus HOM05D002447 ORTHO05D001298 4.1e-06 55.1 75 46.7
Sabra04G0058400 Salix brachista HOM05D002447 ORTHO05D001298 4.1e-06 55.1 77 45.5
MELO3C000609.2 Cucumis melo HOM05D002447 ORTHO05D001298 5.4e-06 54.7 113 46.0
CsaV3_5G028310 Cucumis sativus L. HOM05D002447 ORTHO05D001298 5.4e-06 54.7 113 46.0
Gohir.D12G154900 Gossypium hirsutum HOM05D002447 ORTHO05D001298 5.4e-06 54.7 106 48.1
Thecc.04G115000 Theobroma cacao HOM05D002447 ORTHO05D001298 5.4e-06 54.7 106 40.6
Dinv18620 Davidia involucrata HOM05D002447 ORTHO05D001298 7.1e-06 54.3 79 45.6
Dinv26236 Davidia involucrata HOM05D002447 ORTHO05D001298 7.1e-06 54.3 79 45.6
Gohir.A12G151200 Gossypium hirsutum HOM05D002447 ORTHO05D001298 7.1e-06 54.3 116 45.7
LjContig00141g0028216 Lotus japonicus HOM05D002447 ORTHO05D001298 7.1e-06 54.3 84 46.4
MD13G1021100 Malus domestica HOM05D002447 ORTHO05D001298 7.1e-06 54.3 115 48.7
THA.LOC104805075 Tarenaya hassleriana HOM05D002447 ORTHO05D001298 7.1e-06 54.3 118 36.4


User provided reference genes

Program Settings