Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 5.9e-74 282.0 318 100.0
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 8.5e-73 278.1 318 99.4
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.6e-71 272.7 318 98.1
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 8.8e-70 268.1 318 98.4
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 6.5e-57 225.3 318 89.9
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 1.9e-56 223.8 318 89.3
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 7.2e-56 221.9 316 89.9
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 6.1e-55 218.8 314 87.3
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 1.3e-52 211.1 318 86.5
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 2.8e-52 209.9 318 86.2
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 3.7e-52 209.5 316 71.2
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 5.9e-50 202.2 316 86.1
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 7.7e-50 201.8 317 74.1
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 1.7e-49 200.7 315 85.7
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 5.0e-49 199.1 316 86.4
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 1.1e-48 198.0 316 82.9
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.9e-48 197.2 316 84.2
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.6e-47 194.1 316 85.1
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.0e-46 191.4 316 85.1
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 1.0e-46 191.4 316 85.1
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 2.3e-46 190.3 316 84.2
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 3.0e-46 189.9 316 76.6
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 5.2e-46 189.1 316 76.9
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.2e-45 188.0 313 79.2
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 1.2e-45 188.0 315 80.6
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.6e-45 186.8 316 78.8
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 4.4e-45 186.0 313 84.3
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 9.7e-45 184.9 316 82.3
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 2.2e-44 183.7 316 82.0
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 1.8e-43 180.6 318 81.4
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 7.0e-43 178.7 316 83.9
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 9.1e-43 178.3 316 79.4
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 2.7e-42 176.8 316 80.4
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 2.7e-42 176.8 316 77.2
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 3.5e-42 176.4 317 83.6
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 3.5e-42 176.4 316 81.3
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 4.5e-42 176.0 316 81.6
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 7.7e-42 175.3 316 79.7
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 1.0e-41 174.9 315 81.9
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 1.0e-41 174.9 315 82.9
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 2.2e-41 173.7 299 87.0
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 6.5e-41 172.2 316 78.5
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 1.1e-40 171.4 316 80.7
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 1.1e-40 171.4 316 82.6
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 1.5e-40 171.0 316 81.0
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 1.5e-40 171.0 316 81.0
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 1.5e-40 171.0 316 81.3
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 1.9e-40 170.6 313 83.7
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.9e-40 170.6 316 80.1
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.9e-40 170.6 316 80.1
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 1.9e-40 170.6 316 78.8
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 2.5e-40 170.2 316 80.4
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 2.5e-40 170.2 316 80.7
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 2.5e-40 170.2 316 81.0
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 3.2e-40 169.9 316 73.7
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.2e-40 169.5 316 77.2
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 5.5e-40 169.1 316 80.1
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 2.1e-39 167.2 319 49.2
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 2.7e-39 166.8 314 81.2
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 3.0e-38 163.3 314 82.8
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 5.2e-38 162.5 318 77.0
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 6.8e-38 162.2 314 81.5
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 1.2e-37 161.4 316 79.7
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 1.2e-37 161.4 357 66.9
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 2.0e-37 160.6 316 76.9
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 2.0e-37 160.6 318 77.0
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 2.2e-36 157.1 316 77.8
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 4.8e-36 156.0 316 79.4
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 8.3e-36 155.2 314 70.1
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 8.3e-36 155.2 316 79.4
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 7.0e-35 152.1 316 74.7
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 9.1e-35 151.8 315 78.7
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 1.2e-34 151.4 318 77.7
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 2.7e-34 150.2 315 76.2
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 4.5e-34 149.4 316 80.7
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 7.7e-34 148.7 316 80.4
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 5.0e-33 146.0 314 78.3
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 1.6e-31 141.0 315 74.6
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 6.1e-31 139.0 316 73.1
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.0e-30 138.3 315 74.0
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 1.0e-30 138.3 310 75.2
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 2.3e-30 137.1 315 73.7
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.0e-30 136.7 67 97.0
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 6.8e-30 135.6 316 67.4
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 2.6e-29 133.7 316 66.1
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 2.6e-29 133.7 319 65.2
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 5.7e-29 132.5 318 64.5
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 2.2e-28 130.6 319 63.9
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 3.7e-28 129.8 319 70.5
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 6.3e-28 129.0 319 65.2
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 4.1e-27 126.3 290 80.0
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 1.2e-26 124.8 317 63.4
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 2.7e-26 123.6 75 78.7
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 4.5e-26 122.9 285 80.4
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 1.3e-25 121.3 317 68.1
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 1.3e-25 121.3 317 68.1
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 1.3e-25 121.3 305 75.4
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 3.9e-25 119.8 317 68.1
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 3.9e-25 119.8 317 68.1
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 5.0e-25 119.4 75 72.0
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 7.3e-24 115.5 314 52.9
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.3e-22 110.5 283 39.9
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.4e-21 106.3 279 77.4
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 1.1e-19 101.7 61 80.3
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 7.0e-19 99.0 316 57.9
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.7e-18 97.1 279 75.6
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 6.6e-17 92.4 59 71.2
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 5.6e-16 89.4 57 73.7
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 9.5e-16 88.6 310 41.6
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.1e-14 85.1 61 63.9
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 8.3e-12 75.5 59 62.7
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 2.7e-10 70.5 315 60.3
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 1.7e-09 67.8 75 45.3
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.1e-06 58.5 43 62.8
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 4.0e-06 56.6 39 69.2


User provided reference genes

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