Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g30421 Fragaria vesca HOM05D004447 ORTHO05D005973 2.1e-79 298.9 146 100.0
FAN01G0266 Fragaria x ananassa HOM05D004447 ORTHO05D005973 1.2e-50 203.4 103 95.1
RcHm_v2.0_Chr3g0490671 Rosa chinensis HOM05D004447 ORTHO05D005973 3.5e-50 201.8 103 94.2
FvH4_7g17041 Fragaria vesca HOM05D004447 ORTHO05D005973 6.0e-50 201.1 103 94.2
FAN06G1152 Fragaria x ananassa HOM05D004447 ORTHO05D005973 6.0e-50 201.1 103 94.2
MD03G1176600 Malus domestica HOM05D004447 ORTHO05D005973 6.2e-47 191.0 103 89.3
Cfa009762 Carpinus fangiana HOM05D004447 ORTHO05D005973 3.1e-46 188.7 103 88.3
Haze_23126 Corylus avellana HOM05D004447 ORTHO05D005973 5.3e-46 188.0 103 87.4
Prupe.4G246200 Prunus persica HOM05D004447 ORTHO05D005973 1.2e-45 186.8 103 87.4
CiPaw.13G161800 Carya illinoinensis HOM05D004447 ORTHO05D005973 7.6e-45 184.1 103 87.4
Actinidia06336 Actinidia chinensis HOM05D004447 ORTHO05D005973 1.7e-44 183.0 103 86.4
Lalb_Chr24g0397081 Lupinus albus HOM05D004447 ORTHO05D005973 2.2e-44 182.6 103 84.5
Thecc.09G232100 Theobroma cacao HOM05D004447 ORTHO05D005973 2.2e-44 182.6 103 84.5
Dinv22185 Davidia involucrata HOM05D004447 ORTHO05D005973 2.9e-44 182.2 103 85.4
Rhsim01G0191400 Rhododendron simsii HOM05D004447 ORTHO05D005973 2.9e-44 182.2 103 84.5
Duzib170G0888 Durio zibethinus HOM05D004447 ORTHO05D005973 3.8e-44 181.8 103 85.4
CANSAT54G1530 Cannabis sativa HOM05D004447 ORTHO05D005973 1.1e-43 180.3 103 84.5
Gohir.A08G013660 Gossypium hirsutum HOM05D004447 ORTHO05D005973 1.1e-43 180.3 103 83.5
CSS0013975 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 1.9e-43 179.5 103 85.4
COL.COLO4_24889 Corchorus olitorius HOM05D004447 ORTHO05D005973 1.9e-43 179.5 103 83.5
vmacro12587 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 1.9e-43 179.5 104 83.7
Lj2C632T3 Lonicera japonica HOM05D004447 ORTHO05D005973 3.2e-43 178.7 103 83.5
Psat7g024280 Pisum sativum HOM05D004447 ORTHO05D005973 3.2e-43 178.7 104 81.7
Sed0019583 Sechium edule HOM05D004447 ORTHO05D005973 3.2e-43 178.7 103 83.5
TAR636G0773 Trochodendron aralioides HOM05D004447 ORTHO05D005973 3.2e-43 178.7 103 83.5
Ca_17467_v3 Cicer arietinum L. HOM05D004447 ORTHO05D005973 4.2e-43 178.3 104 80.8
Aqoxy5G02409 Aquilegia oxysepala HOM05D004447 ORTHO05D005973 5.5e-43 177.9 103 81.6
Gohir.D08G024200 Gossypium hirsutum HOM05D004447 ORTHO05D005973 5.5e-43 177.9 103 82.5
Gorai.004G019600 Gossypium raimondii HOM05D004447 ORTHO05D005973 5.5e-43 177.9 103 82.5
Lj3g0019316 Lotus japonicus HOM05D004447 ORTHO05D005973 5.5e-43 177.9 103 81.6
TWI32G0348 Tripterygium wilfordii HOM05D004447 ORTHO05D005973 7.1e-43 177.6 103 79.6
Ciclev10014192m.g Citrus clementina HOM05D004447 ORTHO05D005973 1.2e-42 176.8 103 82.5
Medtr8g099640 Medicago truncatula HOM05D004447 ORTHO05D005973 1.2e-42 176.8 103 81.6
TPR.G3376 Trifolium pratense HOM05D004447 ORTHO05D005973 1.2e-42 176.8 103 81.6
QL01p004967 Quercus lobata HOM05D004447 ORTHO05D005973 2.1e-42 176.0 103 82.5
Cc02_g33870 Coffea canephora HOM05D004447 ORTHO05D005973 2.7e-42 175.6 103 80.6
arahy.Tifrunner.gnm1.ann1.M4FG4U Arachis hypogaea HOM05D004447 ORTHO05D005973 6.0e-42 174.5 103 80.6
CsaV3_3G030760 Cucumis sativus L. HOM05D004447 ORTHO05D005973 7.9e-42 174.1 103 79.6
Nn8g41218 Nelumbo nucifera HOM05D004447 ORTHO05D005973 1.8e-41 172.9 103 79.6
arahy.Tifrunner.gnm1.ann1.1VP9U3 Arachis hypogaea HOM05D004447 ORTHO05D005973 3.0e-41 172.2 103 79.6
Cpa.g.sc84.65 Carica papaya HOM05D004447 ORTHO05D005973 5.1e-41 171.4 103 79.6
Phvul.L009243 Phaseolus vulgaris HOM05D004447 ORTHO05D005973 5.1e-41 171.4 103 78.6
VMungo1080G0814 Vigna mungo HOM05D004447 ORTHO05D005973 5.1e-41 171.4 103 78.6
Manes.14G002000 Manihot esculenta HOM05D004447 ORTHO05D005973 6.7e-41 171.0 103 80.6
Nitab4.5_0000023g0270 Nicotiana tabacum HOM05D004447 ORTHO05D005973 6.7e-41 171.0 106 78.3
PSO170G1822 Papaver somniferum HOM05D004447 ORTHO05D005973 1.5e-40 169.9 103 75.7
MELO3C007066.2 Cucumis melo HOM05D004447 ORTHO05D005973 1.9e-40 169.5 103 78.6
SGA_v2.0_scaffold247G44874 Striga asiatica HOM05D004447 ORTHO05D005973 2.5e-40 169.1 103 74.8
Sp6g04850 Schrenkiella parvula HOM05D004447 ORTHO05D005973 3.3e-40 168.7 103 78.6
THA.LOC104799099 Tarenaya hassleriana HOM05D004447 ORTHO05D005973 3.3e-40 168.7 103 79.6
Glyma.15G034300 Glycine max HOM05D004447 ORTHO05D005973 5.7e-40 167.9 103 76.7
GSVIVG01025279001 Vitis vinifera HOM05D004447 ORTHO05D005973 5.7e-40 167.9 103 79.6
DCAR_031545 Daucus carota HOM05D004447 ORTHO05D005973 9.7e-40 167.2 103 76.7
Glyma.13G340100 Glycine max HOM05D004447 ORTHO05D005973 9.7e-40 167.2 103 73.8
BcaB01g01767 Brassica carinata HOM05D004447 ORTHO05D005973 1.6e-39 166.4 103 77.7
PSO302G0234 Papaver somniferum HOM05D004447 ORTHO05D005973 1.6e-39 166.4 103 74.8
ECA238G3100 Erigeron canadensis HOM05D004447 ORTHO05D005973 2.2e-39 166.0 103 75.7
Lsat_1_v5_gn_2_97601 Lactuca sativa HOM05D004447 ORTHO05D005973 2.2e-39 166.0 103 76.7
Eucgr.J00777 Eucalyptus grandis HOM05D004447 ORTHO05D005973 2.8e-39 165.6 103 77.7
BcaC04g21255 Brassica carinata HOM05D004447 ORTHO05D005973 3.7e-39 165.2 103 76.7
A09p26680 Brassica napus HOM05D004447 ORTHO05D005973 3.7e-39 165.2 103 76.7
C09p33790 Brassica napus HOM05D004447 ORTHO05D005973 3.7e-39 165.2 103 76.7
BolC9t56215H Brassica oleracea HOM05D004447 ORTHO05D005973 3.7e-39 165.2 103 76.7
Atru.chr3.2739 Acer truncatum HOM05D004447 ORTHO05D005973 4.8e-39 164.9 103 79.6
Oeu043298.1 Olea europaea HOM05D004447 ORTHO05D005973 4.8e-39 164.9 103 75.7
Migut.D00596 Erythranthe guttata HOM05D004447 ORTHO05D005973 6.3e-39 164.5 103 73.8
AT4G12620 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 8.2e-39 164.1 103 75.7
BraA09t38238Z Brassica rapa HOM05D004447 ORTHO05D005973 8.2e-39 164.1 103 75.7
Prupe.5G048200 Prunus persica HOM05D004447 ORTHO05D005973 8.2e-39 164.1 104 76.9
PGR119G1865 Punica granatum HOM05D004447 ORTHO05D005973 8.2e-39 164.1 103 78.6
HanXRQChr07g0197501 Helianthus annuus HOM05D004447 ORTHO05D005973 1.1e-38 163.7 103 76.7
Solyc03g006420.4 Solanum lycopersicum HOM05D004447 ORTHO05D005973 1.4e-38 163.3 103 77.7
Sc16g0011520 Simmondsia chinensis HOM05D004447 ORTHO05D005973 1.8e-38 162.9 103 77.7
AL6G47620 Arabidopsis lyrata HOM05D004447 ORTHO05D005973 2.4e-38 162.5 103 74.8
MSTRG.21381 Avicennia marina HOM05D004447 ORTHO05D005973 2.4e-38 162.5 103 72.8
CAN.G289.50 Capsicum annuum HOM05D004447 ORTHO05D005973 2.4e-38 162.5 103 76.7
Thhalv10029404m.g Eutrema salsugineum HOM05D004447 ORTHO05D005973 2.4e-38 162.5 103 75.7
Sabra09G0039600 Salix brachista HOM05D004447 ORTHO05D005973 2.4e-38 162.5 103 76.7
CARHR253540 Cardamine hirsuta HOM05D004447 ORTHO05D005973 3.1e-38 162.2 103 73.8
Hund07518 Selenicereus undatus HOM05D004447 ORTHO05D005973 3.1e-38 162.2 103 76.7
Sopen03g002430 Solanum pennellii HOM05D004447 ORTHO05D005973 3.1e-38 162.2 103 76.7
Carub.0006s3195 Capsella rubella HOM05D004447 ORTHO05D005973 5.3e-38 161.4 103 74.8
Potri.009G054300 Populus trichocarpa HOM05D004447 ORTHO05D005973 6.9e-38 161.0 103 75.7
Aa31LG9G10020 Aethionema arabicum HOM05D004447 ORTHO05D005973 1.2e-37 160.2 103 73.8
AT4G14700 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 2.0e-37 159.5 103 71.8
Nitab4.5_0005731g0030 Nicotiana tabacum HOM05D004447 ORTHO05D005973 2.6e-37 159.1 122 67.2
AUR62000111 Chenopodium quinoa HOM05D004447 ORTHO05D005973 3.4e-37 158.7 103 74.8
EL10Ac4g10265 Beta vulgaris HOM05D004447 ORTHO05D005973 1.3e-36 156.8 103 72.8
EL10Ac4g10281 Beta vulgaris HOM05D004447 ORTHO05D005973 1.3e-36 156.8 103 72.8
AUR62019289 Chenopodium quinoa HOM05D004447 ORTHO05D005973 1.3e-36 156.8 103 73.8
ATR0605G286 Amborella trichopoda HOM05D004447 ORTHO05D005973 6.5e-36 154.5 106 70.8
unitig_0.g298 Utricularia gibba HOM05D004447 ORTHO05D005973 8.5e-36 154.1 103 67.0
Zm00001eb374440 Zea mays HOM05D004447 ORTHO05D005973 4.3e-32 141.7 103 61.2
SMO145G0037 Selaginella moellendorffii HOM05D004447 ORTHO05D005973 1.8e-30 136.3 104 62.5
vmacro17434 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 3.8e-28 128.6 76 84.2
Mapoly0041s0101 Marchantia polymorpha HOM05D004447 ORTHO05D005973 1.1e-27 127.1 103 58.3
Pp3c9_1080 Physcomitrium patens HOM05D004447 ORTHO05D005973 9.4e-27 124.0 103 57.3
PGSC0003DMG402012812 Solanum tuberosum HOM05D004447 ORTHO05D005973 1.1e-24 117.1 70 77.1
GSVIVG01025457001 Vitis vinifera HOM05D004447 ORTHO05D005973 6.3e-23 111.3 75 76.0
CBR_g41485 Chara braunii HOM05D004447 ORTHO05D005973 1.4e-22 110.2 113 46.0
FAN28G2360 Fragaria x ananassa HOM05D004447 ORTHO05D005973 5.3e-22 108.2 51 94.1
SHI27481 Sapria himalayana HOM05D004447 ORTHO05D005973 3.4e-21 105.5 78 65.4
AagrBONN_evm.TU.Sc2ySwM_368.1065 Anthoceros agrestis HOM05D004447 ORTHO05D005973 7.7e-21 104.4 105 47.6
GSVIVG01001925001 Vitis vinifera HOM05D004447 ORTHO05D005973 2.2e-20 102.8 68 76.5
Ah.01g003390 Amaranthus hybridus HOM05D004447 ORTHO05D005973 2.9e-20 102.4 103 54.4
MBI01_g18890_MAGBIO Magnolia biondii HOM05D004447 ORTHO05D005973 1.1e-19 100.5 103 54.4
FAN10G0764 Fragaria x ananassa HOM05D004447 ORTHO05D005973 1.2e-18 97.1 51 96.1
FAN03G1122 Fragaria x ananassa HOM05D004447 ORTHO05D005973 1.6e-18 96.7 55 87.3
ClCG08G000110 Citrullus lanatus HOM05D004447 ORTHO05D005973 3.6e-18 95.5 57 80.7
Nn2g15472 Nelumbo nucifera HOM05D004447 ORTHO05D005973 6.1e-18 94.7 76 60.5
Actinidia23963 Actinidia chinensis HOM05D004447 ORTHO05D058151 1.0e-12 77.4 43 76.7
Peaxi162Scf00862g00001 Petunia axillaris HOM05D004447 ORTHO05D005973 1.7e-12 76.6 51 72.5
AagrBONN_evm.TU.Sc2ySwM_362.493 Anthoceros agrestis HOM05D004447 ORTHO05D005973 1.9e-11 73.2 104 34.6
MCO08G197 Micromonas commoda HOM05D004447 ORTHO05D005973 2.1e-10 69.7 102 31.4
Actinidia23967 Actinidia chinensis HOM05D004447 ORTHO05D005973 2.7e-10 69.3 51 64.7
MD11G1197200 Malus domestica HOM05D004447 ORTHO05D005973 2.8e-07 59.3 27 92.6
ClCG08G000120 Citrullus lanatus HOM05D004447 ORTHO05D005973 6.3e-07 58.2 27 88.9
GSVIVG01001926001 Vitis vinifera HOM05D004447 ORTHO05D005973 3.1e-06 55.8 27 85.2
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 5.3e-06 55.1 32 71.9


User provided reference genes

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