Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2360 Fragaria x ananassa HOM05D004447 ORTHO05D005973 2.9e-81 305.1 144 100.0
FAN01G0266 Fragaria x ananassa HOM05D004447 ORTHO05D005973 4.7e-23 111.7 55 90.9
RcHm_v2.0_Chr3g0490671 Rosa chinensis HOM05D004447 ORTHO05D005973 4.7e-23 111.7 55 90.9
FvH4_7g17041 Fragaria vesca HOM05D004447 ORTHO05D005973 2.4e-22 109.4 55 89.1
FAN06G1152 Fragaria x ananassa HOM05D004447 ORTHO05D005973 2.4e-22 109.4 55 89.1
FvH4_1g30421 Fragaria vesca HOM05D004447 ORTHO05D005973 3.1e-22 109.0 51 94.1
Cfa009762 Carpinus fangiana HOM05D004447 ORTHO05D005973 2.9e-20 102.4 55 85.5
CiPaw.13G161800 Carya illinoinensis HOM05D004447 ORTHO05D005973 2.9e-20 102.4 55 85.5
Haze_23126 Corylus avellana HOM05D004447 ORTHO05D005973 4.9e-20 101.7 55 83.6
Prupe.4G246200 Prunus persica HOM05D004447 ORTHO05D005973 4.9e-20 101.7 55 81.8
MD03G1176600 Malus domestica HOM05D004447 ORTHO05D005973 6.4e-20 101.3 55 83.6
CSS0013975 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 4.2e-19 98.6 55 81.8
Dinv22185 Davidia involucrata HOM05D004447 ORTHO05D005973 4.2e-19 98.6 55 81.8
CsaV3_3G030760 Cucumis sativus L. HOM05D004447 ORTHO05D005973 5.4e-19 98.2 55 80.0
Sed0019583 Sechium edule HOM05D004447 ORTHO05D005973 7.1e-19 97.8 55 80.0
Lalb_Chr24g0397081 Lupinus albus HOM05D004447 ORTHO05D005973 9.3e-19 97.4 55 80.0
Rhsim01G0191400 Rhododendron simsii HOM05D004447 ORTHO05D005973 1.6e-18 96.7 55 78.2
QL01p004967 Quercus lobata HOM05D004447 ORTHO05D005973 2.1e-18 96.3 55 76.4
Actinidia06336 Actinidia chinensis HOM05D004447 ORTHO05D005973 3.5e-18 95.5 55 80.0
Aqoxy5G02409 Aquilegia oxysepala HOM05D004447 ORTHO05D005973 3.5e-18 95.5 55 76.4
Lj3g0019316 Lotus japonicus HOM05D004447 ORTHO05D005973 3.5e-18 95.5 55 76.4
Medtr8g099640 Medicago truncatula HOM05D004447 ORTHO05D005973 3.5e-18 95.5 55 78.2
DCAR_031545 Daucus carota HOM05D004447 ORTHO05D005973 4.6e-18 95.1 55 78.2
PSO170G1822 Papaver somniferum HOM05D004447 ORTHO05D005973 4.6e-18 95.1 53 73.6
PSO302G0234 Papaver somniferum HOM05D004447 ORTHO05D005973 4.6e-18 95.1 53 73.6
GSVIVG01025279001 Vitis vinifera HOM05D004447 ORTHO05D005973 4.6e-18 95.1 55 78.2
Nitab4.5_0005731g0030 Nicotiana tabacum HOM05D004447 ORTHO05D005973 6.0e-18 94.7 55 76.4
Thecc.09G232100 Theobroma cacao HOM05D004447 ORTHO05D005973 7.8e-18 94.4 55 76.4
arahy.Tifrunner.gnm1.ann1.1VP9U3 Arachis hypogaea HOM05D004447 ORTHO05D005973 1.0e-17 94.0 55 76.4
Ca_17467_v3 Cicer arietinum L. HOM05D004447 ORTHO05D005973 1.3e-17 93.6 55 74.5
Cc02_g33870 Coffea canephora HOM05D004447 ORTHO05D005973 1.3e-17 93.6 55 74.5
Duzib170G0888 Durio zibethinus HOM05D004447 ORTHO05D005973 1.3e-17 93.6 55 78.2
TAR636G0773 Trochodendron aralioides HOM05D004447 ORTHO05D005973 1.3e-17 93.6 55 74.5
arahy.Tifrunner.gnm1.ann1.M4FG4U Arachis hypogaea HOM05D004447 ORTHO05D005973 1.7e-17 93.2 55 76.4
Gohir.A08G013660 Gossypium hirsutum HOM05D004447 ORTHO05D005973 1.7e-17 93.2 55 76.4
TWI32G0348 Tripterygium wilfordii HOM05D004447 ORTHO05D005973 1.7e-17 93.2 55 72.7
COL.COLO4_24889 Corchorus olitorius HOM05D004447 ORTHO05D005973 2.3e-17 92.8 54 77.8
TPR.G3376 Trifolium pratense HOM05D004447 ORTHO05D005973 2.3e-17 92.8 54 75.9
MELO3C007066.2 Cucumis melo HOM05D004447 ORTHO05D005973 3.0e-17 92.4 55 76.4
Lj2C632T3 Lonicera japonica HOM05D004447 ORTHO05D005973 3.0e-17 92.4 54 75.9
CANSAT54G1530 Cannabis sativa HOM05D004447 ORTHO05D005973 3.9e-17 92.0 55 74.5
THA.LOC104799099 Tarenaya hassleriana HOM05D004447 ORTHO05D005973 3.9e-17 92.0 55 74.5
Glyma.13G340100 Glycine max HOM05D004447 ORTHO05D005973 5.1e-17 91.7 55 70.9
Oeu043298.1 Olea europaea HOM05D004447 ORTHO05D005973 5.1e-17 91.7 56 71.4
Phvul.L009243 Phaseolus vulgaris HOM05D004447 ORTHO05D005973 6.6e-17 91.3 55 72.7
Psat7g024280 Pisum sativum HOM05D004447 ORTHO05D005973 6.6e-17 91.3 54 74.1
VMungo1080G0814 Vigna mungo HOM05D004447 ORTHO05D005973 6.6e-17 91.3 55 72.7
Ciclev10014192m.g Citrus clementina HOM05D004447 ORTHO05D005973 8.7e-17 90.9 55 72.7
Glyma.15G034300 Glycine max HOM05D004447 ORTHO05D005973 8.7e-17 90.9 55 72.7
Gohir.D08G024200 Gossypium hirsutum HOM05D004447 ORTHO05D005973 8.7e-17 90.9 55 74.5
Gorai.004G019600 Gossypium raimondii HOM05D004447 ORTHO05D005973 8.7e-17 90.9 55 74.5
vmacro12587 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 8.7e-17 90.9 51 80.4
Ah.01g003390 Amaranthus hybridus HOM05D004447 ORTHO05D005973 1.1e-16 90.5 54 74.1
Nn8g41218 Nelumbo nucifera HOM05D004447 ORTHO05D005973 1.1e-16 90.5 54 74.1
Manes.14G002000 Manihot esculenta HOM05D004447 ORTHO05D005973 1.5e-16 90.1 55 74.5
Nitab4.5_0000023g0270 Nicotiana tabacum HOM05D004447 ORTHO05D005973 1.5e-16 90.1 53 75.5
Sp6g04850 Schrenkiella parvula HOM05D004447 ORTHO05D005973 1.5e-16 90.1 55 72.7
Hund07518 Selenicereus undatus HOM05D004447 ORTHO05D005973 1.5e-16 90.1 54 74.1
PGSC0003DMG402012812 Solanum tuberosum HOM05D004447 ORTHO05D005973 1.5e-16 90.1 55 72.7
CAN.G289.50 Capsicum annuum HOM05D004447 ORTHO05D005973 1.9e-16 89.7 55 72.7
Solyc03g006420.4 Solanum lycopersicum HOM05D004447 ORTHO05D005973 1.9e-16 89.7 54 75.9
Sopen03g002430 Solanum pennellii HOM05D004447 ORTHO05D005973 1.9e-16 89.7 54 75.9
SGA_v2.0_scaffold247G44874 Striga asiatica HOM05D004447 ORTHO05D005973 1.9e-16 89.7 55 67.3
Atru.chr3.2739 Acer truncatum HOM05D004447 ORTHO05D005973 2.5e-16 89.4 56 71.4
Aa31LG9G10020 Aethionema arabicum HOM05D004447 ORTHO05D005973 2.5e-16 89.4 55 69.1
CARHR253540 Cardamine hirsuta HOM05D004447 ORTHO05D005973 2.5e-16 89.4 55 70.9
Cpa.g.sc84.65 Carica papaya HOM05D004447 ORTHO05D005973 2.5e-16 89.4 55 72.7
Eucgr.J00777 Eucalyptus grandis HOM05D004447 ORTHO05D005973 2.5e-16 89.4 54 74.1
Migut.D00596 Erythranthe guttata HOM05D004447 ORTHO05D005973 4.3e-16 88.6 55 67.3
EL10Ac4g10265 Beta vulgaris HOM05D004447 ORTHO05D005973 5.6e-16 88.2 54 72.2
EL10Ac4g10281 Beta vulgaris HOM05D004447 ORTHO05D005973 5.6e-16 88.2 54 72.2
Prupe.5G048200 Prunus persica HOM05D004447 ORTHO05D005973 5.6e-16 88.2 53 71.7
BcaB01g01767 Brassica carinata HOM05D004447 ORTHO05D005973 7.3e-16 87.8 54 72.2
BcaC04g21255 Brassica carinata HOM05D004447 ORTHO05D005973 7.3e-16 87.8 54 72.2
A09p26680 Brassica napus HOM05D004447 ORTHO05D005973 7.3e-16 87.8 54 72.2
C09p33790 Brassica napus HOM05D004447 ORTHO05D005973 7.3e-16 87.8 54 72.2
BolC9t56215H Brassica oleracea HOM05D004447 ORTHO05D005973 7.3e-16 87.8 54 72.2
AUR62000111 Chenopodium quinoa HOM05D004447 ORTHO05D005973 7.3e-16 87.8 54 72.2
MSTRG.21381 Avicennia marina HOM05D004447 ORTHO05D005973 9.6e-16 87.4 54 66.7
AUR62019289 Chenopodium quinoa HOM05D004447 ORTHO05D005973 9.6e-16 87.4 54 72.2
MBI01_g18890_MAGBIO Magnolia biondii HOM05D004447 ORTHO05D005973 9.6e-16 87.4 55 72.7
PGR119G1865 Punica granatum HOM05D004447 ORTHO05D005973 9.6e-16 87.4 54 72.2
AL6G47620 Arabidopsis lyrata HOM05D004447 ORTHO05D005973 1.3e-15 87.0 54 70.4
AT4G12620 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 1.3e-15 87.0 54 70.4
ECA238G3100 Erigeron canadensis HOM05D004447 ORTHO05D005973 1.3e-15 87.0 54 70.4
Thhalv10029404m.g Eutrema salsugineum HOM05D004447 ORTHO05D005973 1.3e-15 87.0 54 72.2
Sc16g0011520 Simmondsia chinensis HOM05D004447 ORTHO05D005973 1.3e-15 87.0 55 72.7
AT4G14700 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 1.6e-15 86.7 54 68.5
BraA09t38238Z Brassica rapa HOM05D004447 ORTHO05D005973 1.6e-15 86.7 54 70.4
Sabra09G0039600 Salix brachista HOM05D004447 ORTHO05D005973 1.6e-15 86.7 55 72.7
Carub.0006s3195 Capsella rubella HOM05D004447 ORTHO05D005973 2.1e-15 86.3 53 71.7
Lsat_1_v5_gn_2_97601 Lactuca sativa HOM05D004447 ORTHO05D005973 2.1e-15 86.3 54 72.2
Potri.009G054300 Populus trichocarpa HOM05D004447 ORTHO05D005973 3.6e-15 85.5 55 70.9
HanXRQChr07g0197501 Helianthus annuus HOM05D004447 ORTHO05D005973 4.8e-15 85.1 50 76.0
unitig_0.g298 Utricularia gibba HOM05D004447 ORTHO05D005973 4.0e-14 82.0 54 63.0
SMO145G0037 Selaginella moellendorffii HOM05D004447 ORTHO05D005973 7.6e-13 77.8 50 64.0
Zm00001eb374440 Zea mays HOM05D004447 ORTHO05D005973 1.3e-12 77.0 54 57.4
ATR0605G286 Amborella trichopoda HOM05D004447 ORTHO05D005973 2.9e-12 75.9 57 56.1
Actinidia23963 Actinidia chinensis HOM05D004447 ORTHO05D058151 6.4e-12 74.7 41 78.0
Mapoly0041s0101 Marchantia polymorpha HOM05D004447 ORTHO05D005973 1.9e-11 73.2 54 59.3
Actinidia23967 Actinidia chinensis HOM05D004447 ORTHO05D005973 1.1e-08 63.9 35 80.0
CBR_g41485 Chara braunii HOM05D004447 ORTHO05D005973 1.5e-08 63.5 50 52.0
Pp3c9_1080 Physcomitrium patens HOM05D004447 ORTHO05D005973 1.9e-08 63.2 50 52.0
MD11G1197200 Malus domestica HOM05D004447 ORTHO05D005973 3.3e-08 62.4 31 87.1
ClCG08G000120 Citrullus lanatus HOM05D004447 ORTHO05D005973 7.4e-08 61.2 31 83.9
GSVIVG01001926001 Vitis vinifera HOM05D004447 ORTHO05D005973 3.7e-07 58.9 31 80.6
AagrBONN_evm.TU.Sc2ySwM_368.1065 Anthoceros agrestis HOM05D004447 ORTHO05D005973 1.4e-06 57.0 44 52.3


User provided reference genes

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