Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2322 Fragaria x ananassa HOM05D002112 ORTHO05D005830 3.4e-47 191.4 103 100.0
RcHm_v2.0_Chr2g0118821 Rosa chinensis HOM05D002112 ORTHO05D005830 6.6e-43 177.2 103 91.3
Dinv21066 Davidia involucrata HOM05D002112 ORTHO05D005830 6.2e-41 170.6 103 86.4
TWI38G0996 Tripterygium wilfordii HOM05D002112 ORTHO05D005830 6.2e-41 170.6 101 90.1
Oeu010464.1 Olea europaea HOM05D002112 ORTHO05D005830 8.0e-41 170.2 103 87.4
Dinv17874 Davidia involucrata HOM05D002112 ORTHO05D005830 1.8e-40 169.1 103 85.4
ECA246G0582 Erigeron canadensis HOM05D002112 ORTHO05D005830 3.1e-40 168.3 101 86.1
Haze_01451 Corylus avellana HOM05D002112 ORTHO05D005830 4.0e-40 167.9 103 85.4
Ca_04336_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 5.2e-40 167.5 103 85.4
Lj6g0007258 Lotus japonicus HOM05D002112 ORTHO05D005830 5.2e-40 167.5 103 83.5
Oeu037772.1 Olea europaea HOM05D002112 ORTHO05D005830 5.2e-40 167.5 103 84.5
QL10p051275 Quercus lobata HOM05D002112 ORTHO05D005830 8.9e-40 166.8 102 84.3
HanXRQChr12g0380031 Helianthus annuus HOM05D002112 ORTHO05D005830 1.5e-39 166.0 101 85.1
Lj2A342T117 Lonicera japonica HOM05D002112 ORTHO05D005830 1.5e-39 166.0 103 82.5
Glyma.13G074600 Glycine max HOM05D002112 ORTHO05D005830 2.0e-39 165.6 101 85.1
Prupe.1G198700 Prunus persica HOM05D002112 ORTHO05D005830 4.4e-39 164.5 101 84.2
TAR369G0031 Trochodendron aralioides HOM05D002112 ORTHO05D005830 4.4e-39 164.5 103 82.5
Duzib151G0469 Durio zibethinus HOM05D002112 ORTHO05D005830 5.8e-39 164.1 103 83.5
Glyma.20G048400 Glycine max HOM05D002112 ORTHO05D005830 5.8e-39 164.1 101 84.2
Lj1A1151T83 Lonicera japonica HOM05D002112 ORTHO05D005830 5.8e-39 164.1 97 89.7
Sc19g0002800 Simmondsia chinensis HOM05D002112 ORTHO05D005830 7.5e-39 163.7 103 82.5
FvH4_1g23450 Fragaria vesca HOM05D002112 ORTHO05D005830 9.8e-39 163.3 115 80.0
FAN19G2557 Fragaria x ananassa HOM05D002112 ORTHO05D005830 9.8e-39 163.3 115 80.0
FAN23G2661 Fragaria x ananassa HOM05D002112 ORTHO05D005830 9.8e-39 163.3 115 80.0
FAN26G0200 Fragaria x ananassa HOM05D002112 ORTHO05D005830 9.8e-39 163.3 115 80.0
arahy.Tifrunner.gnm1.ann1.PNXW1P Arachis hypogaea HOM05D002112 ORTHO05D005830 1.7e-38 162.5 101 84.2
CiPaw.01G095700 Carya illinoinensis HOM05D002112 ORTHO05D005830 1.7e-38 162.5 103 82.5
VMungo0540G0891 Vigna mungo HOM05D002112 ORTHO05D005830 1.7e-38 162.5 103 81.6
Atru.chr4.1269 Acer truncatum HOM05D002112 ORTHO05D005830 2.9e-38 161.8 103 82.5
arahy.Tifrunner.gnm1.ann1.9N9T88 Arachis hypogaea HOM05D002112 ORTHO05D005830 3.7e-38 161.4 101 84.2
Migut.M02025 Erythranthe guttata HOM05D002112 ORTHO05D005830 3.7e-38 161.4 103 82.5
HanXRQChr02g0033051 Helianthus annuus HOM05D002112 ORTHO05D005830 4.9e-38 161.0 101 80.2
GSVIVG01010853001 Vitis vinifera HOM05D002112 ORTHO05D005830 4.9e-38 161.0 103 81.6
Lalb_Chr17g0347631 Lupinus albus HOM05D002112 ORTHO05D005830 6.4e-38 160.6 103 79.6
TAR623G1172 Trochodendron aralioides HOM05D002112 ORTHO05D005830 6.4e-38 160.6 103 83.5
AUR62038882 Chenopodium quinoa HOM05D002112 ORTHO05D005830 8.3e-38 160.2 97 84.5
SGA_v2.0_scaffold16G07839 Striga asiatica HOM05D002112 ORTHO05D005830 1.1e-37 159.8 101 82.2
Thhalv10020922m.g Eutrema salsugineum HOM05D002112 ORTHO05D005830 1.9e-37 159.1 101 81.2
AL3G34040 Arabidopsis lyrata HOM05D002112 ORTHO05D005830 2.4e-37 158.7 103 79.6
Ca_06168_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 3.2e-37 158.3 102 79.4
Ca_06185_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 3.2e-37 158.3 102 79.4
Duzib212G0454 Durio zibethinus HOM05D002112 ORTHO05D005830 4.1e-37 157.9 100 83.0
Medtr3g040090 Medicago truncatula HOM05D002112 ORTHO05D005830 4.1e-37 157.9 100 82.0
Carub.0003s2027 Capsella rubella HOM05D002112 ORTHO05D005830 5.4e-37 157.5 103 78.6
Sp3g18350 Schrenkiella parvula HOM05D002112 ORTHO05D005830 5.4e-37 157.5 101 80.2
Manes.04G047300 Manihot esculenta HOM05D002112 ORTHO05D005830 7.0e-37 157.1 101 81.2
CARHR095970 Cardamine hirsuta HOM05D002112 ORTHO05D005830 9.2e-37 156.8 103 78.6
Nitab4.5_0000632g0010 Nicotiana tabacum HOM05D002112 ORTHO05D005830 2.1e-36 155.6 103 75.7
Solyc02g082030.3 Solanum lycopersicum HOM05D002112 ORTHO05D005830 2.7e-36 155.2 103 74.8
Sopen02g026670 Solanum pennellii HOM05D002112 ORTHO05D005830 2.7e-36 155.2 103 74.8
A05p28600 Brassica napus HOM05D002112 ORTHO05D005377 3.5e-36 154.8 97 80.4
BraA05t21737Z Brassica rapa HOM05D002112 ORTHO05D005377 3.5e-36 154.8 97 80.4
Peaxi162Scf00036g02120 Petunia axillaris HOM05D002112 ORTHO05D005830 3.5e-36 154.8 103 76.7
Psat2g021160 Pisum sativum HOM05D002112 ORTHO05D005830 3.5e-36 154.8 103 77.7
BcaC05g28317 Brassica carinata HOM05D002112 ORTHO05D005377 4.6e-36 154.5 97 79.4
C05p44010 Brassica napus HOM05D002112 ORTHO05D005377 4.6e-36 154.5 97 79.4
BolC5t33124H Brassica oleracea HOM05D002112 ORTHO05D005830 4.6e-36 154.5 97 79.4
PGSC0003DMG400007324 Solanum tuberosum HOM05D002112 ORTHO05D005830 6.0e-36 154.1 103 73.8
Sabra17G0000800 Salix brachista HOM05D002112 ORTHO05D005830 1.0e-35 153.3 103 77.7
CAN.G809.29 Capsicum annuum HOM05D002112 ORTHO05D005830 1.3e-35 152.9 103 72.8
TPR.G11324 Trifolium pratense HOM05D002112 ORTHO05D005830 1.7e-35 152.5 103 77.7
THA.LOC104817851 Tarenaya hassleriana HOM05D002112 ORTHO05D005830 2.3e-35 152.1 103 79.6
vmacro12410 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 3.0e-35 151.8 103 78.6
Medtr5g088340 Medicago truncatula HOM05D002112 ORTHO05D005830 3.9e-35 151.4 103 76.7
Sabra17G0015800 Salix brachista HOM05D002112 ORTHO05D005830 3.9e-35 151.4 103 76.7
Ciclev10020598m.g Citrus clementina HOM05D002112 ORTHO05D005830 6.6e-35 150.6 103 74.8
DCAR_007772 Daucus carota HOM05D002112 ORTHO05D005830 8.6e-35 150.2 100 78.0
CANSAT78G1637 Cannabis sativa HOM05D002112 ORTHO05D005830 1.5e-34 149.4 103 74.8
Gohir.A10G139900 Gossypium hirsutum HOM05D002112 ORTHO05D005830 1.9e-34 149.1 115 71.3
Gohir.D10G126900 Gossypium hirsutum HOM05D002112 ORTHO05D005830 1.9e-34 149.1 115 71.3
Gorai.011G139800 Gossypium raimondii HOM05D002112 ORTHO05D005830 1.9e-34 149.1 115 71.3
SalBow5G0693 Salvia bowleyana HOM05D002112 ORTHO05D005830 1.9e-34 149.1 115 71.3
Phvul.006G021000 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 2.5e-34 148.7 103 76.7
COL.COLO4_08219 Corchorus olitorius HOM05D002112 ORTHO05D005830 3.3e-34 148.3 115 71.3
PSO151G0006 Papaver somniferum HOM05D002112 ORTHO05D005830 3.3e-34 148.3 103 73.8
PSO339G3553 Papaver somniferum HOM05D002112 ORTHO05D005830 3.3e-34 148.3 103 73.8
Phvul.008G205800 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 3.3e-34 148.3 100 77.0
Potri.017G026100 Populus trichocarpa HOM05D002112 ORTHO05D005830 3.3e-34 148.3 103 76.7
Thecc.04G174100 Theobroma cacao HOM05D002112 ORTHO05D005830 4.3e-34 147.9 103 76.7
Aqoxy7G04120 Aquilegia oxysepala HOM05D002112 ORTHO05D005830 7.3e-34 147.1 103 74.8
Actinidia04201 Actinidia chinensis HOM05D002112 ORTHO05D005830 9.5e-34 146.7 103 75.7
AUR62031652 Chenopodium quinoa HOM05D002112 ORTHO05D005830 9.5e-34 146.7 115 69.6
MD04G1045800 Malus domestica HOM05D002112 ORTHO05D005830 1.2e-33 146.4 101 76.2
Actinidia22156 Actinidia chinensis HOM05D002112 ORTHO05D005830 2.1e-33 145.6 103 73.8
Eucgr.I00215 Eucalyptus grandis HOM05D002112 ORTHO05D005830 2.1e-33 145.6 115 68.7
MBI14_g20102_MAGBIO Magnolia biondii HOM05D002112 ORTHO05D005830 2.8e-33 145.2 103 72.8
Aa31LG8G7130 Aethionema arabicum HOM05D002112 ORTHO05D005830 8.1e-33 143.7 103 72.8
VMungo0647G1998 Vigna mungo HOM05D002112 ORTHO05D005830 8.1e-33 143.7 103 73.8
Lalb_Chr04g0249531 Lupinus albus HOM05D002112 ORTHO05D005830 1.1e-32 143.3 103 71.8
BolC1t04335H Brassica oleracea HOM05D002112 ORTHO05D005377 1.8e-32 142.5 103 71.8
BcaB04g20660 Brassica carinata HOM05D002112 ORTHO05D005830 2.3e-32 142.1 97 75.3
Potri.007G131700 Populus trichocarpa HOM05D002112 ORTHO05D005830 2.3e-32 142.1 115 68.7
vmacro13897 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 4.0e-32 141.4 115 68.7
Glyma.14G040300 Glycine max HOM05D002112 ORTHO05D005830 6.8e-32 140.6 100 70.0
Cc09_g04780 Coffea canephora HOM05D002112 ORTHO05D005830 1.2e-31 139.8 109 69.7
Sabra07G0106900 Salix brachista HOM05D002112 ORTHO05D005830 1.5e-31 139.4 115 66.1
Sabra07G0118800 Salix brachista HOM05D002112 ORTHO05D005830 1.5e-31 139.4 115 66.1
unitig_748.g7486 Utricularia gibba HOM05D002112 ORTHO05D005830 2.6e-31 138.7 103 67.0
Nn2g10363 Nelumbo nucifera HOM05D002112 ORTHO05D005830 3.4e-31 138.3 115 65.2
Rhsim07G0082300 Rhododendron simsii HOM05D002112 ORTHO05D005830 4.4e-31 137.9 115 66.1
Peaxi162Scf00276g01115 Petunia axillaris HOM05D002112 ORTHO05D005830 5.8e-31 137.5 101 74.3
BcaC09g48987 Brassica carinata HOM05D002112 ORTHO05D005377 7.5e-31 137.1 99 70.7
QL11p031638 Quercus lobata HOM05D002112 ORTHO05D005830 7.5e-31 137.1 102 67.6
ATR0559G336 Amborella trichopoda HOM05D002112 ORTHO05D005830 9.9e-31 136.7 103 68.9
C01p43770 Brassica napus HOM05D002112 ORTHO05D005830 9.9e-31 136.7 99 69.7
Haze_10243 Corylus avellana HOM05D002112 ORTHO05D005830 1.9e-29 132.5 115 62.6
Hund03181 Selenicereus undatus HOM05D002112 ORTHO05D005830 1.9e-29 132.5 127 59.8
MD13G1258100 Malus domestica HOM05D002112 ORTHO05D005830 1.7e-27 125.9 77 83.1
CiPaw.06G167000 Carya illinoinensis HOM05D002112 ORTHO05D005830 2.3e-27 125.6 92 72.8
HPP92_018143 Vanilla planifolia HOM05D002112 ORTHO05D005830 9.5e-26 120.2 103 54.4
Zm00001eb362140 Zea mays HOM05D002112 ORTHO05D005830 4.7e-25 117.9 115 57.4
Os01g0974000 Oryza sativa ssp. japonica HOM05D002112 ORTHO05D005830 8.1e-25 117.1 115 55.7
SEGI_07155 Sequoiadendron giganteum HOM05D002112 ORTHO05D005830 1.8e-24 115.9 102 58.8
Nitab4.5_0003902g0080 Nicotiana tabacum HOM05D002112 ORTHO05D005830 3.1e-24 115.2 103 59.2
SMO356G0377 Selaginella moellendorffii HOM05D002112 ORTHO05D005830 1.5e-23 112.8 102 56.9
MELO3C015704.2 Cucumis melo HOM05D002112 ORTHO05D005830 2.0e-23 112.5 101 60.4
Ah.14g085620 Amaranthus hybridus HOM05D002112 ORTHO05D005830 1.4e-21 106.3 94 61.7
Mapoly0038s0049 Marchantia polymorpha HOM05D002112 ORTHO05D005830 7.1e-21 104.0 102 50.0
A01p34370 Brassica napus HOM05D000233 ORTHO05D000020 1.6e-20 102.8 59 83.1
Peaxi162Scf00036g02121 Petunia axillaris HOM05D002112 ORTHO05D005830 7.8e-20 100.5 61 82.0
EL10Ac2g03438 Beta vulgaris HOM05D002112 ORTHO05D005830 1.3e-19 99.8 103 57.3
CDE08G1601 Ceratophyllum demersum HOM05D002112 ORTHO05D005830 3.9e-19 98.2 115 52.2
Pp3c12_4060 Physcomitrium patens HOM05D002112 ORTHO05D005830 3.9e-19 98.2 100 49.0
AagrBONN_evm.TU.Sc2ySwM_362.2463 Anthoceros agrestis HOM05D002112 ORTHO05D005830 1.5e-18 96.3 100 50.0
BraA01t03533Z Brassica rapa HOM05D002112 ORTHO05D005830 1.9e-18 95.9 103 58.3
DCAR_003742 Daucus carota HOM05D002112 ORTHO05D005830 3.3e-18 95.1 72 72.2
Pp3c3_12480 Physcomitrium patens HOM05D002112 ORTHO05D005830 2.4e-16 89.0 99 46.5
CBR_g24153 Chara braunii HOM05D002112 ORTHO05D005830 5.3e-16 87.8 100 44.0
MCO07G431 Micromonas commoda HOM05D002112 ORTHO05D005830 1.0e-11 73.6 96 39.6
Cre16.g694400 Chlamydomonas reinhardtii HOM05D002112 ORTHO05D005830 6.6e-11 70.9 90 35.6
Hma1.2p1_1220F.1_g268110 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 8.7e-11 70.5 42 85.7
Hma1.2p1_1220F.1_g268115 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 8.7e-11 70.5 42 85.7
Hma1.2p1_2907F.1_g330145 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 8.7e-11 70.5 42 85.7
PRCOL_00002736 Prasinoderma coloniale HOM05D002112 ORTHO05D005830 4.3e-10 68.2 102 32.4
Hma1.2p1_2907F.1_g330140 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 6.2e-09 64.3 40 82.5
Lsat_1_v5_gn_3_102740 Lactuca sativa HOM05D002112 ORTHO05D005830 3.4e-07 58.5 91 44.0
ClCG09G018870 Citrullus lanatus HOM05D002112 ORTHO05D005830 9.9e-07 57.0 181 30.9


User provided reference genes

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