Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0899 Fragaria x ananassa HOM05D002263 ORTHO05D016312 6.5e-38 160.2 80 100.0
FAN26G1597 Fragaria x ananassa HOM05D002263 ORTHO05D016312 6.5e-38 160.2 80 100.0
FAN21G0405 Fragaria x ananassa HOM05D002263 ORTHO05D016312 3.1e-16 88.2 54 79.6
FAN05G0547 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.7e-14 82.4 54 75.9
FAN05G1023 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.7e-14 82.4 54 75.9
FvH4_7g01280 Fragaria vesca HOM05D002263 ORTHO05D003537 2.9e-14 81.6 72 66.7
FAN01G1372 Fragaria x ananassa HOM05D002263 ORTHO05D016312 2.9e-14 81.6 54 75.9
FAN13G3028 Fragaria x ananassa HOM05D002263 ORTHO05D016312 6.5e-14 80.5 54 74.1
FAN01G0038 Fragaria x ananassa HOM05D002263 ORTHO05D003537 8.5e-14 80.1 55 76.4
FAN03G0380 Fragaria x ananassa HOM05D002263 ORTHO05D003537 8.5e-14 80.1 55 76.4
FAN06G0127 Fragaria x ananassa HOM05D002263 ORTHO05D003537 8.5e-14 80.1 55 76.4
FAN10G1377 Fragaria x ananassa HOM05D002263 ORTHO05D003537 8.5e-14 80.1 55 76.4
FAN09G0839 Fragaria x ananassa HOM05D002263 ORTHO05D016312 2.5e-13 78.6 54 72.2
RcHm_v2.0_Chr1g0317031 Rosa chinensis HOM05D002263 ORTHO05D003537 1.0e-11 73.2 76 60.5
arahy.Tifrunner.gnm1.ann1.CKFG51 Arachis hypogaea HOM05D002263 ORTHO05D003537 1.5e-10 69.3 74 55.4
arahy.Tifrunner.gnm1.ann1.ES5MTE Arachis hypogaea HOM05D002263 ORTHO05D003537 1.5e-10 69.3 74 55.4
CANSAT80G1724 Cannabis sativa HOM05D002263 ORTHO05D003537 2.6e-10 68.6 72 58.3
GSVIVG01032138001 Vitis vinifera HOM05D002263 ORTHO05D003537 2.8e-09 65.1 70 57.1
Mapoly0050s0134 Marchantia polymorpha HOM05D002263 ORTHO05D003537 8.2e-09 63.5 45 71.1
Rhsim01G0127100 Rhododendron simsii HOM05D002263 ORTHO05D003537 8.2e-09 63.5 67 53.7
Rhsim01G0128300 Rhododendron simsii HOM05D002263 ORTHO05D003537 8.2e-09 63.5 67 53.7
BcaC09g51672 Brassica carinata HOM05D002263 ORTHO05D003537 1.4e-08 62.8 68 57.4
C01p10550 Brassica napus HOM05D002263 ORTHO05D003537 1.4e-08 62.8 68 57.4
BolC1t01018H Brassica oleracea HOM05D002263 ORTHO05D003537 1.4e-08 62.8 68 57.4
Glyma.10G090000 Glycine max HOM05D002263 ORTHO05D003537 1.4e-08 62.8 68 55.9
BcaNung00438 Brassica carinata HOM05D002263 ORTHO05D003537 1.8e-08 62.4 48 62.5
Carub.0003s2419 Capsella rubella HOM05D002263 ORTHO05D003537 1.8e-08 62.4 67 58.2
Phvul.005G024200 Phaseolus vulgaris HOM05D002263 ORTHO05D003537 1.8e-08 62.4 50 68.0
VMungo1080G1747 Vigna mungo HOM05D002263 ORTHO05D003537 1.8e-08 62.4 50 68.0
AL3G38880 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 2.4e-08 62.0 71 54.9
BraA01t00849Z Brassica rapa HOM05D002263 ORTHO05D003537 3.1e-08 61.6 68 55.9
A01p09010 Brassica napus HOM05D002263 ORTHO05D003537 4.1e-08 61.2 69 55.1
PGSC0003DMG400006793 Solanum tuberosum HOM05D002263 ORTHO05D003537 4.1e-08 61.2 54 57.4
Prupe.2G017500 Prunus persica HOM05D002263 ORTHO05D003537 5.3e-08 60.8 56 57.1
Prupe.2G018500 Prunus persica HOM05D002263 ORTHO05D003537 5.3e-08 60.8 56 57.1
Solyc01g087500.3 Solanum lycopersicum HOM05D002263 ORTHO05D003537 5.3e-08 60.8 54 57.4
Sopen01g034420 Solanum pennellii HOM05D002263 ORTHO05D003537 5.3e-08 60.8 54 57.4
THA.LOC104820131 Tarenaya hassleriana HOM05D002263 ORTHO05D003537 5.3e-08 60.8 50 66.0
Aa31LG5G18570 Aethionema arabicum HOM05D002263 ORTHO05D003537 7.0e-08 60.5 66 56.1
CSS0021570 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 7.0e-08 60.5 52 63.5
CSS0033402 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 7.0e-08 60.5 52 63.5
CAN.G219.44 Capsicum annuum HOM05D002263 ORTHO05D003537 7.0e-08 60.5 54 55.6
Thhalv10024219m.g Eutrema salsugineum HOM05D002263 ORTHO05D003537 7.0e-08 60.5 69 55.1
Lj3g0016100 Lotus japonicus HOM05D002263 ORTHO05D003537 7.0e-08 60.5 54 59.3
Nitab4.5_0002918g0080 Nicotiana tabacum HOM05D002263 ORTHO05D003537 7.0e-08 60.5 54 57.4
TAR369G0754 Trochodendron aralioides HOM05D002263 ORTHO05D003537 9.1e-08 60.1 59 57.6
MD07G1017700 Malus domestica HOM05D002263 ORTHO05D003537 1.2e-07 59.7 56 57.1
Zm00001eb188030 Zea mays HOM05D002263 ORTHO05D003537 1.2e-07 59.7 48 60.4
Dinv43424 Davidia involucrata HOM05D002263 ORTHO05D003537 1.6e-07 59.3 59 54.2
CARHR061100 Cardamine hirsuta HOM05D002263 ORTHO05D003537 2.0e-07 58.9 55 56.4
Lj9C634T13 Lonicera japonica HOM05D002263 ORTHO05D003537 2.0e-07 58.9 68 51.5
Nitab4.5_0000707g0240 Nicotiana tabacum HOM05D002263 ORTHO05D003537 2.0e-07 58.9 54 55.6
TWI73G0071 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 2.0e-07 58.9 68 54.4
AT3G23890 Arabidopsis thaliana HOM05D002263 ORTHO05D003537 2.7e-07 58.5 57 57.9
MELO3C023986.2 Cucumis melo HOM05D002263 ORTHO05D003537 2.7e-07 58.5 57 61.4
Hma1.2p1_2160F.1_g315570 Hydrangea macrophylla HOM05D002263 ORTHO05D003537 2.7e-07 58.5 68 51.5
Lalb_Chr19g0140281 Lupinus albus HOM05D002263 ORTHO05D003537 2.7e-07 58.5 54 57.4
QL04p008574 Quercus lobata HOM05D002263 ORTHO05D003537 2.7e-07 58.5 68 52.9
TWI09G0750 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 2.7e-07 58.5 68 52.9
TAR623G1165 Trochodendron aralioides HOM05D002263 ORTHO05D003537 2.7e-07 58.5 59 55.9
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 3.5e-07 58.2 74 50.0
Gohir.A10G219600 Gossypium hirsutum HOM05D002263 ORTHO05D003537 3.5e-07 58.2 50 62.0
Gohir.D10G229100 Gossypium hirsutum HOM05D002263 ORTHO05D003537 3.5e-07 58.2 50 62.0
Gorai.011G261600 Gossypium raimondii HOM05D002263 ORTHO05D003537 3.5e-07 58.2 50 62.0
Medtr3g031040 Medicago truncatula HOM05D002263 ORTHO05D003537 3.5e-07 58.2 69 53.6
QL04p008074 Quercus lobata HOM05D002263 ORTHO05D003537 3.5e-07 58.2 68 52.9
vmacro14860 Vaccinium macrocarpon HOM05D002263 ORTHO05D003537 3.5e-07 58.2 60 53.3
BcaNung01342 Brassica carinata HOM05D002263 ORTHO05D003537 4.5e-07 57.8 57 56.1
Cc02_g28170 Coffea canephora HOM05D002263 ORTHO05D003537 4.5e-07 57.8 50 62.0
CsaV3_3G032050 Cucumis sativus L. HOM05D002263 ORTHO05D003537 4.5e-07 57.8 57 61.4
Glyma.15G276000 Glycine max HOM05D002263 ORTHO05D003537 4.5e-07 57.8 50 64.0
MD02G1308000 Malus domestica HOM05D002263 ORTHO05D003537 4.5e-07 57.8 57 54.4
Nn7g36258 Nelumbo nucifera HOM05D002263 ORTHO05D003537 4.5e-07 57.8 55 54.5
Psat7g085320 Pisum sativum HOM05D002263 ORTHO05D003537 4.5e-07 57.8 52 59.6
Sp7g26900 Schrenkiella parvula HOM05D002263 ORTHO05D003537 4.5e-07 57.8 55 56.4
CiPaw.05G149100 Carya illinoinensis HOM05D002263 ORTHO05D003537 5.9e-07 57.4 58 53.4
CiPaw.14G001600 Carya illinoinensis HOM05D002263 ORTHO05D003537 5.9e-07 57.4 58 53.4
Ca_14467_v3 Cicer arietinum L. HOM05D002263 ORTHO05D003537 5.9e-07 57.4 69 53.6
Thecc.10G041300 Theobroma cacao HOM05D002263 ORTHO05D003537 5.9e-07 57.4 50 62.0
Zm00001eb251620 Zea mays HOM05D002263 ORTHO05D003537 5.9e-07 57.4 48 58.3
Eucgr.H02748 Eucalyptus grandis HOM05D002263 ORTHO05D003537 7.7e-07 57.0 55 56.4
SalBow5G1665 Salvia bowleyana HOM05D002263 ORTHO05D003537 7.7e-07 57.0 58 53.4
Actinidia31076 Actinidia chinensis HOM05D002263 ORTHO05D003537 1.0e-06 56.6 71 50.7
Psat0s825g0040 Pisum sativum HOM05D002263 ORTHO05D003537 1.0e-06 56.6 52 57.7
TPR.G22438 Trifolium pratense HOM05D002263 ORTHO05D003537 1.0e-06 56.6 52 57.7
TPR.G27843 Trifolium pratense HOM05D002263 ORTHO05D003537 1.0e-06 56.6 52 57.7
Aqoxy2G00154 Aquilegia oxysepala HOM05D002263 ORTHO05D003537 1.3e-06 56.2 43 67.4
Ciclev10030505m.g Citrus clementina HOM05D002263 ORTHO05D003537 1.3e-06 56.2 68 52.9
Sed0008745 Sechium edule HOM05D002263 ORTHO05D003537 1.3e-06 56.2 57 59.6
Eucgr.H02633 Eucalyptus grandis HOM05D002263 ORTHO05D003537 1.7e-06 55.8 58 53.4
Oeu049493.1 Olea europaea HOM05D002263 ORTHO05D003537 1.7e-06 55.8 60 50.0
Peaxi162Scf00744g00349 Petunia axillaris HOM05D002263 ORTHO05D003537 1.7e-06 55.8 53 52.8
Duzib106G1002 Durio zibethinus HOM05D002263 ORTHO05D003537 2.2e-06 55.5 50 60.0
Hund15422 Selenicereus undatus HOM05D002263 ORTHO05D003537 2.2e-06 55.5 74 45.9
unitig_8.g3777 Utricularia gibba HOM05D002263 ORTHO05D003537 2.2e-06 55.5 56 53.6
AagrBONN_evm.TU.Sc2ySwM_344.3755 Anthoceros agrestis HOM05D002263 ORTHO05D003537 2.9e-06 55.1 58 55.2
ClCG10G012270 Citrullus lanatus HOM05D002263 ORTHO05D003537 2.9e-06 55.1 55 56.4
Sed0024297 Sechium edule HOM05D002263 ORTHO05D003537 2.9e-06 55.1 55 56.4
arahy.Tifrunner.gnm1.ann1.VJ5EI6 Arachis hypogaea HOM05D002263 ORTHO05D003537 3.8e-06 54.7 54 53.7
ATR0332G038 Amborella trichopoda HOM05D002263 ORTHO05D003537 5.0e-06 54.3 59 49.2
arahy.Tifrunner.gnm1.ann1.NCP65V Arachis hypogaea HOM05D002263 ORTHO05D003537 5.0e-06 54.3 54 53.7
Rhsim09G0080900 Rhododendron simsii HOM05D002263 ORTHO05D003537 5.0e-06 54.3 48 58.3
HPP92_014707 Vanilla planifolia HOM05D002263 ORTHO05D003537 5.0e-06 54.3 57 50.9
Ah.10g038760 Amaranthus hybridus HOM05D002263 ORTHO05D003537 6.5e-06 53.9 75 45.3
AUR62009398 Chenopodium quinoa HOM05D002263 ORTHO05D003537 8.5e-06 53.5 58 55.2
AUR62023080 Chenopodium quinoa HOM05D002263 ORTHO05D003537 8.5e-06 53.5 58 55.2
FAN09G4539 Fragaria x ananassa HOM05D002263 ORTHO05D016312 8.5e-06 53.5 54 55.6
Lsat_1_v5_gn_1_105720 Lactuca sativa HOM05D002263 ORTHO05D003537 8.5e-06 53.5 58 55.2
Nn2g15271 Nelumbo nucifera HOM05D002263 ORTHO05D003537 8.5e-06 53.5 54 55.6


User provided reference genes

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