Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1461 Fragaria x ananassa HOM05D004198 ORTHO05D006470 8.7e-125 450.3 223 100.0
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.2e-118 429.9 213 99.5
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.2e-118 429.9 213 99.5
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 1.6e-118 429.5 213 99.1
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.1e-118 429.1 213 98.6
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 1.1e-114 416.8 213 95.8
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 6.7e-109 397.5 216 88.4
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 5.7e-108 394.4 213 88.3
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 9.7e-108 393.7 215 86.5
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 2.2e-107 392.5 217 86.2
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 1.8e-106 389.4 213 87.8
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 2.4e-106 389.0 216 86.1
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 5.3e-106 387.9 213 87.8
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 6.9e-106 387.5 216 85.2
Cc00_g13770 Coffea canephora HOM05D004198 ORTHO05D006470 6.9e-106 387.5 213 86.4
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 1.2e-105 386.7 213 86.4
Dinv25493 Davidia involucrata HOM05D004198 ORTHO05D006470 1.5e-105 386.3 216 86.6
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 2.0e-105 386.0 213 87.3
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 3.4e-105 385.2 215 85.1
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 4.5e-105 384.8 216 86.1
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 4.5e-105 384.8 213 86.9
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 7.7e-105 384.0 215 84.7
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 1.0e-104 383.6 215 84.2
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 1.0e-104 383.6 215 84.2
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 1.0e-104 383.6 215 84.2
BolC7t46396H Brassica oleracea HOM05D004198 ORTHO05D006470 1.3e-104 383.3 215 84.2
BraA03t15222Z Brassica rapa HOM05D004198 ORTHO05D006470 1.3e-104 383.3 215 84.7
Haze_26080 Corylus avellana HOM05D004198 ORTHO05D006470 1.3e-104 383.3 216 84.7
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 1.3e-104 383.3 213 86.9
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 1.3e-104 383.3 213 85.9
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 1.7e-104 382.9 215 84.7
CARHR241180 Cardamine hirsuta HOM05D004198 ORTHO05D006470 1.7e-104 382.9 215 84.7
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 1.7e-104 382.9 213 85.9
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 1.7e-104 382.9 216 85.6
A03p61840 Brassica napus HOM05D004198 ORTHO05D006470 2.2e-104 382.5 215 84.7
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 2.9e-104 382.1 213 85.9
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 2.9e-104 382.1 213 85.4
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 3.8e-104 381.7 215 84.7
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 3.8e-104 381.7 216 86.1
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 5.0e-104 381.3 215 83.3
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 5.0e-104 381.3 213 86.9
C07p59520 Brassica napus HOM05D004198 ORTHO05D006470 6.5e-104 380.9 215 83.7
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 6.5e-104 380.9 213 85.9
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 8.5e-104 380.6 213 85.4
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 8.5e-104 380.6 213 88.3
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 1.1e-103 380.2 216 84.3
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 1.4e-103 379.8 215 84.2
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 1.9e-103 379.4 213 86.4
Actinidia33515 Actinidia chinensis HOM05D004198 ORTHO05D006470 2.5e-103 379.0 216 85.6
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 3.2e-103 378.6 213 85.4
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 4.2e-103 378.3 213 85.4
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 4.2e-103 378.3 213 85.0
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 4.2e-103 378.3 213 86.4
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 7.2e-103 377.5 213 84.0
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 7.2e-103 377.5 213 87.3
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 9.4e-103 377.1 216 83.3
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 9.4e-103 377.1 213 87.3
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 9.4e-103 377.1 213 84.0
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 1.2e-102 376.7 218 84.9
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 1.2e-102 376.7 213 83.1
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 1.2e-102 376.7 213 85.9
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 1.6e-102 376.3 213 86.4
PGSC0003DMG401015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 2.7e-102 375.6 213 85.4
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 3.6e-102 375.2 213 83.6
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 3.6e-102 375.2 213 81.7
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 3.6e-102 375.2 213 87.3
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 3.6e-102 375.2 213 84.5
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 4.7e-102 374.8 213 81.7
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 4.7e-102 374.8 216 83.8
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 4.7e-102 374.8 241 78.0
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 6.1e-102 374.4 216 81.9
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 6.1e-102 374.4 216 82.9
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 7.9e-102 374.0 216 83.8
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 1.4e-101 373.2 213 85.4
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 1.4e-101 373.2 219 81.7
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 3.0e-101 372.1 213 84.5
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 3.0e-101 372.1 213 85.9
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 3.0e-101 372.1 214 83.6
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 3.9e-101 371.7 213 82.6
CAN.G86.12 Capsicum annuum HOM05D004198 ORTHO05D006470 3.9e-101 371.7 213 85.4
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 3.9e-101 371.7 216 83.3
AL7G18410 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 5.1e-101 371.3 215 82.3
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 5.1e-101 371.3 213 84.0
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 5.1e-101 371.3 213 86.4
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 1.1e-100 370.2 213 84.0
EL10Ac8g18951 Beta vulgaris HOM05D004198 ORTHO05D006470 2.6e-100 369.0 213 82.2
Carub.0007s0731 Capsella rubella HOM05D004198 ORTHO05D006470 2.6e-100 369.0 215 80.5
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 2.6e-100 369.0 213 84.5
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 7.4e-100 367.5 213 85.0
Ah.09g228850 Amaranthus hybridus HOM05D004198 ORTHO05D006470 1.3e-99 366.7 213 81.2
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 3.7e-99 365.2 277 67.1
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 6.3e-99 364.4 213 84.5
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 1.1e-98 363.6 213 82.2
Psat4g019880 Pisum sativum HOM05D004198 ORTHO05D006470 2.4e-98 362.5 213 84.0
CDE05G0881 Ceratophyllum demersum HOM05D004198 ORTHO05D006470 1.2e-97 360.1 213 80.8
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 2.6e-97 359.0 214 80.8
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 2.6e-97 359.0 213 81.7
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 3.5e-97 358.6 213 79.8
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 4.5e-97 358.2 213 79.8
Duzib168G0961 Durio zibethinus HOM05D004198 ORTHO05D006470 2.2e-96 355.9 217 80.2
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 5.0e-96 354.8 213 79.3
TWI63G0157 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 3.2e-95 352.1 215 78.6
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 9.4e-95 350.5 217 78.3
A03p61830 Brassica napus HOM05D004198 ORTHO05D006470 1.2e-94 350.1 215 78.6
BolC7t46395H Brassica oleracea HOM05D004198 ORTHO05D006470 1.6e-94 349.7 215 79.1
Sopen07g006480 Solanum pennellii HOM05D004198 ORTHO05D006470 8.2e-91 337.4 213 79.3
Atru.chr7.1795 Acer truncatum HOM05D004198 ORTHO05D006470 1.4e-90 336.7 217 76.0
SEGI_06318 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 1.8e-90 336.3 213 76.5
DCAR_000446 Daucus carota HOM05D004198 ORTHO05D006470 2.5e-87 325.9 213 75.6
Potri.006G134450 Populus trichocarpa HOM05D004198 ORTHO05D006470 3.2e-87 325.5 217 74.7
SGA_v2.0_scaffold31G12701 Striga asiatica HOM05D004198 ORTHO05D006470 1.6e-86 323.2 213 74.6
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 2.0e-84 316.2 211 72.0
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 6.3e-83 311.2 212 69.8
BcaNung02155 Brassica carinata HOM05D004198 ORTHO05D006470 2.4e-82 309.3 168 85.1
PSO135G0878 Papaver somniferum HOM05D004198 ORTHO05D000955 1.2e-81 307.0 213 70.4
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 3.2e-79 298.9 213 72.8
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 4.2e-79 298.5 213 71.8
BraA03t15221Z Brassica rapa HOM05D004198 ORTHO05D006470 3.6e-78 295.4 225 67.6
C07p59510 Brassica napus HOM05D004198 ORTHO05D006470 1.5e-76 290.0 215 68.8
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 1.6e-73 280.0 211 64.5
PSO724G0241 Papaver somniferum HOM05D004198 ORTHO05D006470 5.9e-73 278.1 156 83.3
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 4.9e-59 231.9 133 85.7
PGSC0003DMG400002301 Solanum tuberosum HOM05D004198 ORTHO05D006470 4.3e-55 218.8 128 85.2
Ciclev10008705m.g Citrus clementina HOM05D004198 ORTHO05D006470 1.5e-52 210.3 132 78.8
Thecc.09G068400 Theobroma cacao HOM05D004198 ORTHO05D006470 6.4e-51 204.9 131 75.6
ATR0721G130 Amborella trichopoda HOM05D004198 ORTHO05D006470 4.7e-46 188.7 123 71.5
Haze_26708 Corylus avellana HOM05D004198 ORTHO05D006470 4.0e-45 185.7 207 45.4
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 5.2e-45 185.3 110 84.5
COL.COLO4_21183 Corchorus olitorius HOM05D004198 ORTHO05D006470 4.8e-30 135.6 110 68.2
MD02G1105200 Malus domestica HOM05D004198 ORTHO05D006470 1.1e-21 107.8 55 87.3
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 1.1e-13 81.3 72 61.1
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 4.2e-10 69.3 72 54.2


User provided reference genes

Program Settings