Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 3.7e-186 654.8 356 100.0
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.9e-138 495.7 357 80.1
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 1.7e-82 310.5 354 59.3
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 9.2e-76 288.1 357 56.9
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 2.6e-70 270.0 305 54.1
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.2e-67 261.2 276 56.5
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.3e-66 257.7 276 56.2
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 1.7e-66 257.3 282 56.0
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 1.1e-65 254.6 268 57.8
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.9e-65 253.8 283 54.1
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 1.6e-64 250.8 281 56.9
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 4.7e-64 249.2 282 56.7
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 1.0e-63 248.1 280 58.2
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 8.9e-63 245.0 275 57.8
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 1.2e-62 244.6 284 53.2
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 1.5e-62 244.2 285 51.9
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 2.6e-62 243.4 357 47.9
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 1.7e-61 240.7 285 56.1
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 6.4e-61 238.8 280 53.2
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 2.4e-60 236.9 288 55.2
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 2.4e-60 236.9 281 49.5
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.0e-59 233.8 288 54.5
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 2.0e-59 233.8 282 51.1
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 2.7e-59 233.4 280 49.3
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 6.0e-59 232.3 288 54.5
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 7.8e-59 231.9 283 55.1
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 1.3e-58 231.1 283 54.8
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 1.3e-58 231.1 283 54.8
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 1.3e-58 231.1 283 54.8
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 3.9e-58 229.6 271 53.5
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 3.9e-58 229.6 274 56.2
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 5.0e-58 229.2 278 55.0
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 6.6e-58 228.8 283 54.4
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 8.6e-58 228.4 275 56.0
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 8.6e-58 228.4 281 44.1
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 3.3e-57 226.5 282 55.7
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 5.6e-57 225.7 275 55.3
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 2.1e-56 223.8 275 54.9
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 1.1e-55 221.5 281 53.7
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 1.4e-55 221.1 326 40.8
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.3e-55 220.3 320 45.9
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 4.0e-55 219.5 291 43.0
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 5.2e-55 219.2 279 47.3
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 2.6e-54 216.9 284 53.5
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 5.8e-54 215.7 282 52.5
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 5.8e-54 215.7 279 55.9
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 5.8e-54 215.7 284 54.6
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 7.5e-54 215.3 333 46.8
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 2.2e-53 213.8 279 49.5
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.1e-52 211.5 278 50.7
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 5.4e-52 209.1 271 53.9
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 7.1e-52 208.8 280 48.2
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.0e-50 204.9 275 46.9
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.0e-50 204.9 285 51.2
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 3.0e-50 203.4 218 50.9
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.3e-49 199.9 277 53.1
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 5.6e-49 199.1 282 50.4
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 1.2e-48 198.0 277 52.0
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 2.1e-48 197.2 275 50.2
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 8.1e-48 195.3 271 48.7
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 2.3e-47 193.7 215 50.2
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 2.3e-47 193.7 276 49.6
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 4.0e-47 193.0 239 55.2
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 6.8e-47 192.2 263 53.6
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 8.9e-47 191.8 283 48.4
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.2e-46 191.4 169 56.2
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 2.0e-46 190.7 263 49.4
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 7.6e-46 188.7 165 69.7
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 9.9e-46 188.3 275 49.8
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 9.9e-46 188.3 271 49.4
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.3e-45 188.0 271 48.3
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 1.7e-45 187.6 310 45.2
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 4.9e-45 186.0 275 51.3
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 1.4e-44 184.5 282 41.1
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 2.4e-44 183.7 266 50.4
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 4.1e-44 183.0 270 46.7
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 4.1e-44 183.0 270 46.7
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 1.2e-43 181.4 278 44.6
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 2.1e-43 180.6 275 40.4
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 2.7e-43 180.3 282 43.6
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 1.9e-41 174.1 278 47.5
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 3.3e-41 173.3 270 44.4
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 7.3e-41 172.2 278 37.1
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 3.6e-40 169.9 275 47.6
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 8.1e-40 168.7 283 46.6
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 5.2e-39 166.0 263 44.9
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 1.2e-38 164.9 285 46.0
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 4.4e-38 162.9 237 53.6
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 2.2e-37 160.6 193 45.6
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.1e-36 158.3 272 44.9
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.1e-36 158.3 156 70.5
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 3.2e-36 156.8 291 38.5
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 1.0e-34 151.8 174 48.3
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 1.7e-34 151.0 160 62.5
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 2.3e-34 150.6 263 49.4
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 2.3e-34 150.6 263 49.4
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 3.0e-34 150.2 179 50.3
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 8.7e-34 148.7 264 46.2
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.5e-33 147.9 288 44.1
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 3.3e-33 146.7 290 43.4
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 1.3e-32 144.8 164 62.8
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 3.1e-31 140.2 107 64.5
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 2.4e-28 130.6 171 42.7
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 9.3e-28 128.6 278 30.9
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 3.5e-27 126.7 144 48.6
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 1.0e-26 125.2 215 39.1
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 4.8e-24 116.3 171 52.6
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 9.0e-23 112.1 279 29.0
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.7e-21 107.8 189 34.4
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 1.1e-20 105.1 280 35.0
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.9e-17 94.4 47 89.4
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 2.5e-17 94.0 113 63.7
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 2.8e-16 90.5 154 35.7
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 8.1e-16 89.0 87 52.9
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 2.9e-13 80.5 87 77.0
FvH4_3g02750 Fragaria vesca HOM05D006314 ORTHO05D007970 5.1e-10 69.7 47 70.2
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 5.7e-09 66.2 86 65.1
Medtr7g047660 Medicago truncatula HOM05D052963 ORTHO05D007970 1.6e-08 64.7 56 64.3
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 3.1e-07 60.5 88 37.5
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 4.5e-06 56.6 37 64.9


User provided reference genes

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