Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.5e-113 412.5 384 100.0
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 9.5e-79 298.1 333 97.9
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 9.2e-74 281.6 331 96.7
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 4.3e-71 272.7 318 98.1
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 4.5e-60 236.1 331 87.6
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 3.9e-56 223.0 328 84.5
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 3.9e-56 223.0 329 87.2
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.3e-54 218.0 318 88.4
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 1.1e-53 214.9 331 84.0
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 1.2e-52 211.5 331 83.4
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 7.6e-52 208.8 329 69.0
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 1.3e-51 208.0 329 84.5
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 6.4e-51 205.7 329 81.8
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 1.9e-50 204.1 329 84.5
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 9.3e-50 201.8 329 81.2
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 1.6e-49 201.1 330 71.5
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 2.7e-49 200.3 323 83.6
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 3.9e-48 196.4 329 83.0
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 3.9e-48 196.4 329 83.3
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 3.9e-48 196.4 329 83.3
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 8.7e-48 195.3 328 79.6
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 1.5e-47 194.5 325 82.8
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 2.5e-47 193.7 332 79.2
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 3.7e-46 189.9 326 82.2
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 1.1e-45 188.3 329 74.2
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 1.4e-45 188.0 329 83.6
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 1.4e-45 188.0 329 79.6
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.4e-45 188.0 319 78.1
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 4.0e-45 186.4 329 81.2
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 6.9e-45 185.7 329 73.3
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 6.9e-45 185.7 331 78.2
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.0e-44 184.1 329 76.3
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 4.5e-44 183.0 329 79.0
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 4.5e-44 183.0 326 80.1
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 7.6e-44 182.2 329 79.0
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 1.7e-43 181.0 330 82.7
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 1.7e-43 181.0 328 80.8
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 1.7e-43 181.0 329 81.2
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 2.9e-43 180.3 329 80.9
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 6.5e-43 179.1 331 81.3
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 8.4e-43 178.7 332 78.0
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 1.1e-42 178.3 329 79.9
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 1.1e-42 178.3 329 79.9
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 1.9e-42 177.6 333 79.0
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 3.2e-42 176.8 329 76.9
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 7.1e-42 175.6 321 81.3
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 7.1e-42 175.6 320 77.8
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 9.3e-42 175.3 88 97.7
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 3.5e-41 173.3 322 79.2
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 3.5e-41 173.3 322 79.2
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 4.6e-41 172.9 329 74.2
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 6.0e-41 172.6 322 77.6
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 7.9e-41 172.2 328 79.9
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 1.0e-40 171.8 320 80.0
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 1.3e-40 171.4 325 78.2
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 1.8e-40 171.0 329 72.0
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 3.0e-40 170.2 316 81.3
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 5.1e-40 169.5 324 49.4
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 1.1e-39 168.3 313 84.0
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 1.1e-39 168.3 329 81.2
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 3.3e-39 166.8 331 75.5
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 4.3e-39 166.4 330 78.5
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 4.3e-39 166.4 299 85.3
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 2.1e-38 164.1 322 79.8
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 2.1e-38 164.1 329 76.0
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 2.1e-38 164.1 326 75.8
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 6.3e-38 162.5 363 65.8
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 3.1e-37 160.2 329 79.9
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 4.1e-37 159.8 329 78.1
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 5.3e-37 159.5 329 74.5
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 5.3e-37 159.5 329 79.6
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 6.9e-37 159.1 329 78.1
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 6.9e-37 159.1 328 75.6
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 1.0e-35 155.2 332 75.3
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 1.7e-35 154.5 328 76.5
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 2.9e-35 153.7 322 68.3
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 2.9e-35 153.7 326 76.7
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 5.0e-35 152.9 329 72.3
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 6.5e-35 152.5 328 73.2
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 1.1e-34 151.8 328 74.7
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.4e-34 151.4 328 72.9
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 4.6e-33 146.4 329 72.0
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.9e-31 141.0 333 65.8
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 9.7e-31 138.7 333 63.4
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 2.4e-29 134.0 310 74.5
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 3.1e-29 133.7 327 63.0
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 3.1e-29 133.7 321 65.1
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 4.1e-29 133.3 342 62.0
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 9.1e-29 132.1 90 74.4
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 1.5e-28 131.3 303 78.2
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 1.0e-27 128.6 324 69.1
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 1.7e-27 127.9 329 67.2
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 1.7e-27 127.9 329 67.2
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.7e-27 127.9 324 63.9
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 2.9e-27 127.1 330 67.9
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 3.8e-27 126.7 333 67.3
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 3.2e-26 123.6 322 62.1
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 5.5e-26 122.9 88 65.9
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 5.5e-26 122.9 286 80.1
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 5.1e-24 116.3 305 74.4
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.5e-23 114.8 296 39.5
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 3.3e-23 113.6 323 51.7
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.5e-20 104.8 320 69.7
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 8.5e-19 99.0 61 78.7
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.9e-18 97.8 97 54.6
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.5e-18 97.4 320 68.8
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 5.5e-18 96.3 331 55.6
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.7e-17 94.0 59 72.9
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 4.4e-15 86.7 57 71.9
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.7e-14 84.7 61 63.9
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 1.2e-12 78.6 90 43.3
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 1.7e-11 74.7 59 62.7
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 4.7e-09 66.6 74 45.9
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 9.7e-07 58.9 90 43.3
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.3e-06 58.5 43 62.8


User provided reference genes

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