Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 7.5e-71 270.4 136 100.0
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 3.5e-60 235.0 136 89.7
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.0e-59 233.4 136 89.0
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 1.0e-59 233.4 136 87.5
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 2.4e-45 185.7 132 70.5
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 2.1e-44 182.6 134 71.6
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 9.3e-37 157.1 136 63.2
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 3.0e-35 152.1 134 61.2
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 5.6e-34 147.9 135 60.7
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 5.6e-34 147.9 135 59.3
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.7e-33 145.2 133 57.9
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 4.8e-33 144.8 136 56.6
FvH4_4g34180 Fragaria vesca HOM05D006564 ORTHO05D007772 1.1e-32 143.7 136 62.5
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 3.1e-32 142.1 136 59.6
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 1.5e-31 139.8 135 57.8
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 2.0e-31 139.4 134 56.7
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 2.2e-30 136.0 120 61.7
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 3.8e-30 135.2 136 55.9
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 8.4e-30 134.0 124 57.3
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 8.4e-30 134.0 127 59.1
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 2.5e-29 132.5 122 57.4
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 3.2e-29 132.1 135 53.3
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 5.5e-29 131.3 133 54.9
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 1.2e-28 130.2 135 53.3
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 1.6e-28 129.8 125 56.8
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 2.7e-28 129.0 135 52.6
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 4.6e-28 128.3 142 49.3
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.8e-27 126.3 66 95.5
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 1.8e-27 126.3 111 59.5
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 3.0e-27 125.6 135 55.6
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 3.0e-27 125.6 120 55.8
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 3.0e-27 125.6 116 59.5
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 3.9e-27 125.2 123 53.7
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 3.9e-27 125.2 135 51.1
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 5.1e-27 124.8 125 56.8
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 5.1e-27 124.8 136 52.2
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 8.7e-27 124.0 128 54.7
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.5e-26 123.2 159 47.2
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.9e-26 122.9 137 49.6
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 3.3e-26 122.1 126 54.8
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 5.7e-26 121.3 137 49.6
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 5.7e-26 121.3 134 51.5
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 9.7e-26 120.6 126 53.2
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 1.3e-25 120.2 137 53.3
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 8.2e-25 117.5 126 51.6
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 1.1e-24 117.1 138 47.8
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 1.4e-24 116.7 119 52.1
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 2.4e-24 115.9 136 52.2
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 2.4e-24 115.9 123 51.2
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 4.1e-24 115.2 136 49.3
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 4.1e-24 115.2 116 56.9
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 9.0e-24 114.0 138 50.7
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 2.0e-23 112.8 136 48.5
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 2.6e-23 112.5 111 56.8
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 3.4e-23 112.1 116 55.2
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 3.4e-23 112.1 120 51.7
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 4.5e-23 111.7 122 50.0
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 1.3e-22 110.2 133 45.9
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 1.7e-22 109.8 136 49.3
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 5.0e-22 108.2 118 50.0
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 6.5e-22 107.8 120 50.0
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 9.4e-21 104.0 133 46.6
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 2.7e-20 102.4 122 50.8
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 2.7e-20 102.4 126 47.6
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 3.6e-20 102.1 132 49.2
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 4.6e-20 101.7 133 48.1
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 7.9e-20 100.9 126 50.0
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.4e-19 100.1 135 47.4
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 3.9e-19 98.6 132 43.2
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 3.9e-19 98.6 134 48.5
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 2.5e-18 95.9 132 41.7
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 7.4e-18 94.4 89 56.2
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 6.3e-17 91.3 126 42.9
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 1.1e-16 90.5 134 39.6
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 1.4e-16 90.1 133 39.1
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 1.4e-16 90.1 133 39.1
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 1.4e-16 90.1 128 40.6
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 4.1e-16 88.6 133 38.3
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 5.3e-16 88.2 95 53.7
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 6.9e-16 87.8 125 40.8
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 9.1e-16 87.4 103 47.6
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 9.1e-16 87.4 123 40.7
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 1.2e-15 87.0 133 38.3
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 1.0e-14 84.0 126 38.9
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.7e-14 83.2 133 36.8
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 2.2e-14 82.8 123 46.3
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 3.2e-13 79.0 126 42.1
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 4.2e-13 78.6 124 36.3
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 5.1e-11 71.6 83 45.8
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 2.6e-10 69.3 90 45.6
CBR_g8804 Chara braunii HOM05D006564 ORTHO05D007772 3.1e-08 62.4 97 33.0
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 3.8e-06 55.5 63 46.0


User provided reference genes

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