Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 6.2e-172 607.4 326 100.0
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 7.0e-139 497.7 357 80.1
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 4.7e-95 352.1 324 66.0
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 3.9e-89 332.4 329 63.5
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 1.6e-74 283.9 237 67.9
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 5.1e-73 278.9 251 61.0
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 8.7e-73 278.1 329 53.2
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 1.5e-72 277.3 250 64.8
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 5.6e-72 275.4 250 63.6
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.3e-71 274.2 245 59.6
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 4.8e-71 272.3 245 59.6
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 6.2e-71 271.9 252 57.9
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 1.1e-70 271.2 278 54.7
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 3.1e-70 269.6 253 58.5
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 5.3e-70 268.9 241 60.6
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.2e-69 267.7 251 55.4
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 9.9e-69 264.6 251 52.6
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 2.9e-68 263.1 249 62.2
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 6.4e-68 261.9 244 63.1
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 3.2e-67 259.6 245 62.9
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 7.1e-67 258.5 245 64.1
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.7e-66 256.5 245 62.0
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 6.0e-66 255.4 244 62.7
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 7.9e-66 255.0 251 59.0
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 1.3e-65 254.2 244 62.7
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 2.3e-65 253.4 244 63.1
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 2.3e-65 253.4 260 50.0
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 5.1e-65 252.3 240 62.9
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 5.1e-65 252.3 250 61.2
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 6.7e-65 251.9 240 62.5
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 6.7e-65 251.9 240 62.5
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 6.7e-65 251.9 240 62.5
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 1.1e-64 251.1 249 55.4
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 3.3e-64 249.6 240 62.1
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 3.3e-64 249.6 244 59.4
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 9.6e-64 248.1 294 51.7
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.3e-63 247.7 249 55.0
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 1.3e-63 247.7 247 55.5
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 2.1e-63 246.9 244 61.1
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 2.8e-63 246.5 249 52.6
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 8.1e-63 245.0 240 57.1
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 1.8e-62 243.8 244 61.9
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 5.3e-62 242.3 281 51.2
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 6.9e-62 241.9 253 59.7
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 6.9e-62 241.9 250 59.2
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 9.0e-62 241.5 247 56.7
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 9.0e-62 241.5 255 49.8
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 2.0e-61 240.4 247 61.5
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 9.9e-61 238.0 258 48.8
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 1.1e-59 234.6 252 59.1
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.9e-59 233.8 255 59.2
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 4.2e-59 232.6 212 66.5
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 1.6e-58 230.7 239 55.6
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 1.6e-58 230.7 240 55.0
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 2.1e-58 230.3 244 56.1
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 2.7e-58 229.9 251 55.4
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 7.9e-58 228.4 240 59.2
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 7.9e-58 228.4 191 60.7
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.3e-57 227.6 246 59.8
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 2.3e-57 226.9 248 52.8
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 2.3e-57 226.9 296 49.0
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 3.0e-57 226.5 246 54.1
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 6.7e-57 225.3 247 57.5
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 1.1e-56 224.6 246 53.7
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 1.9e-56 223.8 242 52.5
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 4.3e-56 222.6 244 53.7
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.7e-55 219.5 185 58.4
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 4.8e-55 219.2 244 56.6
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.1e-54 218.0 231 57.6
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 3.1e-54 216.5 247 45.7
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 2.2e-52 210.3 244 57.0
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 2.2e-52 210.3 244 56.1
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 3.8e-52 209.5 232 57.3
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 3.8e-52 209.5 252 54.4
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 4.9e-52 209.1 260 53.5
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 6.5e-52 208.8 239 51.5
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 6.5e-52 208.8 239 51.5
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 8.4e-52 208.4 232 53.4
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 8.4e-52 208.4 155 61.9
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 1.1e-51 208.0 242 50.4
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 2.5e-51 206.8 239 50.2
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 2.5e-51 206.8 240 53.8
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 9.3e-51 204.9 240 51.2
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 2.7e-50 203.4 206 63.1
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 4.6e-50 202.6 276 49.3
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 6.0e-50 202.2 251 51.4
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 7.9e-50 201.8 232 50.9
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 5.1e-49 199.1 244 54.5
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.9e-48 197.2 149 79.2
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 8.2e-47 191.8 153 68.0
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 2.4e-46 190.3 233 52.8
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 5.3e-46 189.1 245 53.5
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 2.6e-45 186.8 244 52.0
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 1.4e-43 181.0 232 56.5
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 1.4e-43 181.0 232 56.5
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 1.9e-43 180.6 243 48.1
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.8e-41 174.1 241 51.5
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 3.3e-40 169.9 185 50.8
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 5.7e-40 169.1 184 48.4
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 3.7e-39 166.4 155 68.4
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 8.5e-36 155.2 208 42.3
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 9.4e-35 151.8 162 48.8
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.8e-33 147.5 247 36.0
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 3.0e-33 146.7 239 44.8
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 9.7e-32 141.7 241 43.6
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 3.1e-30 136.7 142 51.4
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 2.2e-28 130.6 232 43.1
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 2.5e-27 127.1 149 46.3
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 3.0e-25 120.2 105 56.2
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 2.8e-23 113.6 272 29.8
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 3.7e-23 113.2 116 50.9
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 6.3e-23 112.5 105 73.3
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.1e-19 101.7 247 29.6
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.3e-15 88.2 43 90.7
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 2.2e-15 87.4 103 65.0
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 4.8e-15 86.3 150 36.0
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 1.2e-08 65.1 85 40.0
Medtr7g047660 Medicago truncatula HOM05D052963 ORTHO05D007970 1.5e-08 64.7 56 64.3
FvH4_3g02750 Fragaria vesca HOM05D006314 ORTHO05D007970 4.4e-08 63.2 43 69.8
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 3.1e-06 57.0 74 39.2


User provided reference genes

Program Settings