Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 0.0e+00 1351.3 668 100.0
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 0.0e+00 1343.6 668 99.4
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 0.0e+00 1306.2 669 97.0
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 0.0e+00 1304.3 668 96.9
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 0.0e+00 1296.2 668 96.0
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 0.0e+00 1201.4 684 89.2
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 0.0e+00 1146.0 679 85.4
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 0.0e+00 1104.7 682 80.9
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 1.0e-301 1039.6 688 74.9
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 1.4e-298 1029.2 686 75.4
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 3.7e-296 1021.1 687 75.0
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 1.1e-295 1019.6 678 75.7
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 4.1e-295 1017.7 691 74.2
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 5.4e-295 1017.3 696 74.0
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 1.2e-294 1016.1 684 74.6
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 2.8e-291 1005.0 690 74.3
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 2.0e-289 998.8 689 73.1
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 7.5e-289 996.9 642 75.4
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.7e-288 995.7 689 73.3
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 2.8e-288 995.0 686 73.5
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 6.3e-288 993.8 677 73.0
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 4.1e-287 991.1 675 72.9
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 9.2e-287 989.9 661 73.8
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 9.2e-287 989.9 685 72.8
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 2.7e-286 988.4 690 71.6
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 4.5e-286 987.6 686 70.8
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 5.0e-285 984.2 692 71.4
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 4.3e-284 981.1 623 76.4
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 7.3e-284 980.3 703 71.7
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 1.2e-283 979.5 684 71.8
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 6.1e-283 977.2 688 72.2
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 1.2e-281 973.0 676 72.6
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.5e-281 972.6 683 71.9
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 2.0e-281 972.2 674 71.7
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 1.3e-280 969.5 678 71.5
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 2.9e-280 968.4 681 72.4
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 3.7e-280 968.0 680 73.4
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 8.3e-280 966.8 684 72.2
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 7.0e-279 963.8 673 71.9
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 7.0e-279 963.8 684 71.6
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 1.2e-278 963.0 673 71.8
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 1.3e-277 959.5 671 70.9
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 3.0e-277 958.4 683 71.7
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 3.9e-277 958.0 686 69.8
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 1.1e-276 956.4 680 70.7
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 7.3e-276 953.7 686 69.7
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 9.5e-276 953.4 676 70.6
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 4.7e-275 951.0 683 70.6
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 6.8e-274 947.2 668 71.1
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 4.9e-272 941.0 663 70.3
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.4e-271 939.5 675 69.5
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.4e-271 938.7 676 69.4
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 4.1e-271 937.9 686 69.0
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 2.7e-270 935.3 689 69.8
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 3.5e-270 934.9 692 68.1
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 3.5e-270 934.9 687 70.0
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 4.6e-270 934.5 672 69.8
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 2.3e-269 932.2 685 68.5
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 3.0e-269 931.8 687 69.6
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 6.6e-269 930.6 692 67.8
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 8.6e-269 930.2 687 67.5
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 1.9e-268 929.1 682 69.8
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 1.2e-267 926.4 676 68.6
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 2.8e-267 925.2 673 69.5
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 4.7e-267 924.5 679 68.2
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 2.3e-266 922.2 666 68.5
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 8.9e-266 920.2 677 68.8
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 4.4e-265 917.9 669 68.5
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 5.8e-265 917.5 669 69.2
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 1.7e-264 916.0 671 68.1
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 2.9e-264 915.2 707 67.0
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 3.7e-264 914.8 671 68.0
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 1.1e-263 913.3 671 67.8
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 4.1e-263 911.4 670 67.8
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 2.1e-262 909.1 670 67.6
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 5.6e-260 901.0 686 67.5
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 9.9e-257 890.2 637 68.9
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 5.4e-255 884.4 672 65.6
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 4.6e-254 881.3 674 64.8
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 1.0e-253 880.2 667 66.6
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 8.4e-248 860.5 637 68.8
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 5.6e-244 847.8 558 75.1
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 6.2e-243 844.3 804 58.2
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 6.2e-243 844.3 616 67.9
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 5.3e-242 841.3 693 63.3
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 1.3e-240 836.6 563 73.4
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 2.1e-238 829.3 670 64.2
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 5.1e-237 824.7 560 73.9
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 4.0e-234 815.1 558 71.7
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 8.4e-232 807.4 610 64.9
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 7.4e-228 794.3 814 52.9
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 3.2e-223 778.9 681 61.1
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 6.1e-214 748.0 560 68.4
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 8.2e-211 737.6 473 77.4
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 1.8e-202 709.9 619 58.6
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.2e-188 664.1 787 47.8
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 9.5e-167 591.3 429 69.7
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 1.4e-154 550.8 377 71.4
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.8e-148 528.9 319 85.0
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.8e-148 528.9 319 85.0
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.7e-144 517.3 422 60.7
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 9.9e-124 448.4 516 48.3
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 5.3e-117 426.0 349 61.9
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 5.1e-112 409.5 549 44.8
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 3.5e-105 386.7 271 72.7
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 1.3e-94 351.7 265 70.6
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 8.2e-94 349.0 271 65.3
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 1.9e-82 311.2 556 36.3
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.1e-79 302.0 229 63.8
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.0e-72 276.9 144 97.2
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 5.0e-59 233.4 550 30.7
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 4.0e-56 223.8 248 50.4
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 6.6e-51 206.5 271 44.3
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 4.6e-44 183.7 181 54.7
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 1.1e-29 136.0 142 52.8
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 7.8e-28 129.8 124 54.0
RcHm_v2.0_Chr1g0380361 Rosa chinensis HOM05D006589 ORTHO05D008350 1.5e-23 115.5 76 84.2
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 1.3e-11 75.9 110 40.9
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 1.2e-07 62.8 97 36.1


User provided reference genes

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