Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2862 Fragaria x ananassa HOM05D005783 ORTHO05D007042 5.6e-43 177.2 87 100.0
FAN27G1156 Fragaria x ananassa HOM05D005783 ORTHO05D007042 8.6e-36 153.3 102 80.4
FvH4_2g21220 Fragaria vesca HOM05D005783 ORTHO05D007042 9.5e-27 123.2 87 74.7
FAN20G2131 Fragaria x ananassa HOM05D005783 ORTHO05D007042 9.5e-27 123.2 87 74.7
RcHm_v2.0_Chr6g0287721 Rosa chinensis HOM05D005783 ORTHO05D007042 9.5e-27 123.2 87 74.7
Potri.005G226300 Populus trichocarpa HOM05D005783 ORTHO05D007042 5.2e-25 117.5 87 70.1
PGR031G0633 Punica granatum HOM05D005783 ORTHO05D007042 5.2e-25 117.5 87 72.4
Potri.002G036500 Populus trichocarpa HOM05D005783 ORTHO05D007042 6.8e-25 117.1 87 71.3
CiPaw.04G187800 Carya illinoinensis HOM05D005783 ORTHO05D007042 8.9e-25 116.7 87 71.3
Nn3g19695 Nelumbo nucifera HOM05D005783 ORTHO05D007042 8.9e-25 116.7 87 71.3
Phvul.007G033301 Phaseolus vulgaris HOM05D005783 ORTHO05D007042 8.9e-25 116.7 87 70.1
Phvul.008G022975 Phaseolus vulgaris HOM05D005783 ORTHO05D007042 8.9e-25 116.7 87 70.1
CANSAT01G1988 Cannabis sativa HOM05D005783 ORTHO05D007042 1.2e-24 116.3 87 70.1
MD10G1181400 Malus domestica HOM05D005783 ORTHO05D007042 1.2e-24 116.3 87 70.1
COL.COLO4_31022 Corchorus olitorius HOM05D005783 ORTHO05D007042 1.5e-24 115.9 87 70.1
Lalb_Chr12g0200071 Lupinus albus HOM05D005783 ORTHO05D007042 1.5e-24 115.9 87 71.3
Manes.13G035600 Manihot esculenta HOM05D005783 ORTHO05D007042 1.5e-24 115.9 87 71.3
Phvul.001G162100 Phaseolus vulgaris HOM05D005783 ORTHO05D007042 1.5e-24 115.9 87 70.1
CsaV3_3G022140 Cucumis sativus L. HOM05D005783 ORTHO05D007042 2.0e-24 115.5 87 71.3
Duzib160G0066 Durio zibethinus HOM05D005783 ORTHO05D007042 2.0e-24 115.5 87 70.1
Gohir.A10G043300 Gossypium hirsutum HOM05D005783 ORTHO05D007042 2.0e-24 115.5 87 71.3
Gohir.D10G044500 Gossypium hirsutum HOM05D005783 ORTHO05D007042 2.0e-24 115.5 87 71.3
Gorai.011G047500 Gossypium raimondii HOM05D005783 ORTHO05D007042 2.0e-24 115.5 87 71.3
TWI12G1387 Tripterygium wilfordii HOM05D005783 ORTHO05D007042 2.0e-24 115.5 87 71.3
Eucgr.A00909 Eucalyptus grandis HOM05D005783 ORTHO05D007042 3.4e-24 114.8 87 70.1
Lalb_Chr13g0299521 Lupinus albus HOM05D005783 ORTHO05D007042 3.4e-24 114.8 87 70.1
MELO3C012871.2 Cucumis melo HOM05D005783 ORTHO05D007042 4.4e-24 114.4 87 70.1
Duzib235G0343 Durio zibethinus HOM05D005783 ORTHO05D007042 4.4e-24 114.4 87 69.0
Manes.13G035400 Manihot esculenta HOM05D005783 ORTHO05D007042 4.4e-24 114.4 87 70.1
Nitab4.5_0000326g0120 Nicotiana tabacum HOM05D005783 ORTHO05D007042 4.4e-24 114.4 87 70.1
Nitab4.5_0005593g0040 Nicotiana tabacum HOM05D005783 ORTHO05D007042 4.4e-24 114.4 87 70.1
TWI18G0071 Tripterygium wilfordii HOM05D005783 ORTHO05D007042 4.4e-24 114.4 87 70.1
Actinidia09533 Actinidia chinensis HOM05D000063 ORTHO05D002147 5.8e-24 114.0 87 69.0
EL10As5g23481 Beta vulgaris HOM05D005783 ORTHO05D007042 5.8e-24 114.0 87 69.0
CDE03G0454 Ceratophyllum demersum HOM05D005783 ORTHO05D007042 5.8e-24 114.0 87 69.0
MD05G1194800 Malus domestica HOM05D005783 ORTHO05D007042 5.8e-24 114.0 87 69.0
Prupe.8G221500 Prunus persica HOM05D005783 ORTHO05D007042 5.8e-24 114.0 87 69.0
Hund09610 Selenicereus undatus HOM05D005783 ORTHO05D007042 7.5e-24 113.6 87 69.0
TWI75G0260 Tripterygium wilfordii HOM05D005783 ORTHO05D007042 7.5e-24 113.6 87 70.1
TAR633G0770 Trochodendron aralioides HOM05D005783 ORTHO05D007042 7.5e-24 113.6 87 70.1
arahy.Tifrunner.gnm1.ann1.3WZ992 Arachis hypogaea HOM05D005783 ORTHO05D007042 9.9e-24 113.2 87 69.0
arahy.Tifrunner.gnm1.ann1.EB1FDX Arachis hypogaea HOM05D005783 ORTHO05D007042 9.9e-24 113.2 87 69.0
arahy.Tifrunner.gnm1.ann1.P2X2DJ Arachis hypogaea HOM05D005783 ORTHO05D007042 9.9e-24 113.2 87 69.0
arahy.Tifrunner.gnm1.ann1.R5MBR2 Arachis hypogaea HOM05D005783 ORTHO05D007042 9.9e-24 113.2 87 69.0
Lalb_Chr07g0181091 Lupinus albus HOM05D005783 ORTHO05D007042 9.9e-24 113.2 87 69.0
Nitab4.5_0007062g0060 Nicotiana tabacum HOM05D005783 ORTHO05D007042 9.9e-24 113.2 87 69.0
Lsat_1_v5_gn_9_10421 Lactuca sativa HOM05D005783 ORTHO05D007042 1.3e-23 112.8 87 69.0
BolC7t40500H Brassica oleracea HOM05D005783 ORTHO05D007042 1.7e-23 112.5 87 70.1
Gohir.D06G144100 Gossypium hirsutum HOM05D005783 ORTHO05D007042 2.2e-23 112.1 87 67.8
CAN.G1366.15 Capsicum annuum HOM05D005783 ORTHO05D007042 2.9e-23 111.7 87 67.8
CAN.G812.22 Capsicum annuum HOM05D005783 ORTHO05D007042 2.9e-23 111.7 87 67.8
Lj1g0019785 Lotus japonicus HOM05D005783 ORTHO05D007042 2.9e-23 111.7 87 67.8
Lj4g0020381 Lotus japonicus HOM05D005783 ORTHO05D007042 2.9e-23 111.7 87 69.0
Thecc.06G145600 Theobroma cacao HOM05D005783 ORTHO05D007042 2.9e-23 111.7 87 67.8
Glyma.03G164500 Glycine max HOM05D005783 ORTHO05D007042 3.7e-23 111.3 87 67.8
Glyma.19G165900 Glycine max HOM05D005783 ORTHO05D007042 3.7e-23 111.3 87 67.8
Aqoxy3G02728 Aquilegia oxysepala HOM05D005783 ORTHO05D007042 4.9e-23 110.9 87 69.0
Migut.N02211 Erythranthe guttata HOM05D005783 ORTHO05D007042 4.9e-23 110.9 87 66.7
Gorai.010G167900 Gossypium raimondii HOM05D005783 ORTHO05D007042 4.9e-23 110.9 87 66.7
Hund02922 Selenicereus undatus HOM05D005783 ORTHO05D007042 4.9e-23 110.9 87 69.0
HanXRQChr09g0254261 Helianthus annuus HOM05D005783 ORTHO05D007042 8.3e-23 110.2 87 67.8
Nitab4.5_0006107g0020 Nicotiana tabacum HOM05D005783 ORTHO05D007042 8.3e-23 110.2 85 68.2
Rhsim01G0263700 Rhododendron simsii HOM05D005783 ORTHO05D007042 8.3e-23 110.2 87 67.8
GSVIVG01033693001 Vitis vinifera HOM05D005783 ORTHO05D007042 8.3e-23 110.2 87 67.8
CSS0031432 Camellia sinensis var. sinensis HOM05D005783 ORTHO05D007042 1.1e-22 109.8 87 66.7
ECA247G3893 Erigeron canadensis HOM05D005783 ORTHO05D007042 1.1e-22 109.8 84 69.0
Solyc09g066500.4 Solanum lycopersicum HOM05D005783 ORTHO05D007042 1.1e-22 109.8 87 67.8
PGSC0003DMG400010293 Solanum tuberosum HOM05D005783 ORTHO05D007042 1.1e-22 109.8 87 67.8
CSS0015227 Camellia sinensis var. sinensis HOM05D005783 ORTHO05D007042 1.4e-22 109.4 87 67.8
Peaxi162Scf00624g00036 Petunia axillaris HOM05D005783 ORTHO05D007042 2.4e-22 108.6 87 66.7
AL3G53490 Arabidopsis lyrata HOM05D005783 ORTHO05D007042 3.2e-22 108.2 87 65.5
PGSC0003DMG400025503 Solanum tuberosum HOM05D005783 ORTHO05D007042 3.2e-22 108.2 87 65.5
HPP92_023430 Vanilla planifolia HOM05D005783 ORTHO05D007042 3.2e-22 108.2 87 65.5
Sed0004262 Sechium edule HOM05D005783 ORTHO05D007042 4.1e-22 107.8 87 66.7
Lsat_1_v5_gn_5_182900 Lactuca sativa HOM05D005783 ORTHO05D007042 5.4e-22 107.5 87 65.5
Os02g0618250 Oryza sativa ssp. japonica HOM05D005783 ORTHO05D007042 5.4e-22 107.5 87 65.5
BolC9t54438H Brassica oleracea HOM05D005783 ORTHO05D007042 7.1e-22 107.1 93 62.4
THA.LOC104814520 Tarenaya hassleriana HOM05D005783 ORTHO05D007042 7.1e-22 107.1 87 66.7
Carub.0003s3493 Capsella rubella HOM05D005783 ORTHO05D007042 9.2e-22 106.7 87 64.4
CARHR111040 Cardamine hirsuta HOM05D005783 ORTHO05D007042 9.2e-22 106.7 87 64.4
Sed0003492 Sechium edule HOM05D005783 ORTHO05D007042 9.2e-22 106.7 87 65.5
AT2G20490 Arabidopsis thaliana HOM05D005783 ORTHO05D007042 1.2e-21 106.3 87 64.4
Ciclev10023246m.g Citrus clementina HOM05D005783 ORTHO05D007042 1.2e-21 106.3 87 64.4
THA.LOC104804047 Tarenaya hassleriana HOM05D005783 ORTHO05D007042 1.2e-21 106.3 87 66.7
Sp3g33690 Schrenkiella parvula HOM05D005783 ORTHO05D007042 1.6e-21 105.9 87 64.4
SalBow6G1359 Salvia bowleyana HOM05D005783 ORTHO05D007042 2.1e-21 105.5 116 53.4
ClCG07G001140 Citrullus lanatus HOM05D005783 ORTHO05D007042 2.7e-21 105.1 84 66.7
Cc08_g00200 Coffea canephora HOM05D005783 ORTHO05D007042 3.5e-21 104.8 87 64.4
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 4.6e-21 104.4 85 64.7
A07p00260 Brassica napus HOM05D005783 ORTHO05D007042 4.6e-21 104.4 87 63.2
BraA07t27818Z Brassica rapa HOM05D005783 ORTHO05D007042 4.6e-21 104.4 87 63.2
Cfa013045 Carpinus fangiana HOM05D005783 ORTHO05D007042 7.8e-21 103.6 87 64.4
Thhalv10002146m.g Eutrema salsugineum HOM05D005783 ORTHO05D007042 7.8e-21 103.6 87 62.1
Medtr7g097110 Medicago truncatula HOM05D005783 ORTHO05D007042 7.8e-21 103.6 87 64.4
Atru.chr5.1729 Acer truncatum HOM05D005783 ORTHO05D007042 1.0e-20 103.2 81 66.7
PSO210G0272 Papaver somniferum HOM05D005783 ORTHO05D007042 1.0e-20 103.2 87 63.2
PSO210G6011 Papaver somniferum HOM05D005783 ORTHO05D007042 1.0e-20 103.2 87 63.2
PSO386G0180 Papaver somniferum HOM05D005783 ORTHO05D007042 1.0e-20 103.2 87 63.2
PSO386G0258 Papaver somniferum HOM05D005783 ORTHO05D007042 1.0e-20 103.2 87 63.2
BcaC07g41214 Brassica carinata HOM05D005783 ORTHO05D007042 1.3e-20 102.8 87 62.1
A09p58870 Brassica napus HOM05D005783 ORTHO05D007042 1.3e-20 102.8 87 62.1
C08p42200 Brassica napus HOM05D005783 ORTHO05D007042 1.3e-20 102.8 87 62.1
BolC8t51779H Brassica oleracea HOM05D005783 ORTHO05D007042 1.3e-20 102.8 87 62.1
BraA09t41273Z Brassica rapa HOM05D005783 ORTHO05D007042 1.3e-20 102.8 87 62.1
MBI07_g16905_MAGBIO Magnolia biondii HOM05D005783 ORTHO05D007042 1.7e-20 102.4 83 66.3
BcaC06g36737 Brassica carinata HOM05D005783 ORTHO05D007042 2.3e-20 102.1 87 62.1
C07p00540 Brassica napus HOM05D005783 ORTHO05D007042 2.3e-20 102.1 87 62.1
Gohir.A06G139500 Gossypium hirsutum HOM05D005783 ORTHO05D007042 3.0e-20 101.7 87 63.2
Atru.chr12.1356 Acer truncatum HOM05D005783 ORTHO05D007042 3.9e-20 101.3 81 64.2
BcaB03g16843 Brassica carinata HOM05D005783 ORTHO05D007042 6.6e-20 100.5 87 60.9
BcaB08g34911 Brassica carinata HOM05D005783 ORTHO05D007042 8.6e-20 100.1 87 60.9
BcaC04g22786 Brassica carinata HOM05D005783 ORTHO05D007042 8.6e-20 100.1 87 60.9
A09p12910 Brassica napus HOM05D005783 ORTHO05D007042 8.6e-20 100.1 87 60.9
C09p15300 Brassica napus HOM05D005783 ORTHO05D007042 8.6e-20 100.1 87 60.9
BraA09t36936Z Brassica rapa HOM05D005783 ORTHO05D007042 8.6e-20 100.1 87 60.9
Medtr8g069770 Medicago truncatula HOM05D005783 ORTHO05D007042 1.1e-19 99.8 87 62.1
SalBow6G4406 Salvia bowleyana HOM05D005783 ORTHO05D007042 5.6e-19 97.4 109 53.2
unitig_60.g25746 Utricularia gibba HOM05D005783 ORTHO05D007042 5.6e-19 97.4 105 56.2
Haze_21406 Corylus avellana HOM05D005783 ORTHO05D007042 4.0e-17 91.3 98 55.1
SEGI_26494 Sequoiadendron giganteum HOM05D005783 ORTHO05D007042 5.2e-17 90.9 87 57.5
Pp3c19_4700 Physcomitrium patens HOM05D005783 ORTHO05D007042 4.4e-16 87.8 87 54.0
SMO133G0019 Selaginella moellendorffii HOM05D005783 ORTHO05D007042 2.9e-15 85.1 87 50.6
Mapoly0081s0079 Marchantia polymorpha HOM05D005783 ORTHO05D007042 1.1e-14 83.2 87 51.7
Duzib192G0414 Durio zibethinus HOM05D005783 ORTHO05D007042 1.4e-14 82.8 95 52.6
FAN24G2571 Fragaria x ananassa HOM05D005783 ORTHO05D007042 1.9e-14 82.4 40 100.0
Sabra05G0174700 Salix brachista HOM05D005783 ORTHO05D007042 5.4e-14 80.9 70 62.9
Phvul.011G076600 Phaseolus vulgaris HOM05D005783 ORTHO05D007042 1.2e-13 79.7 69 63.8
MCO03G241 Micromonas commoda HOM05D005783 ORTHO05D007042 1.0e-12 76.6 81 49.4
MELO3C033129.2 Cucumis melo HOM05D005783 ORTHO05D007042 2.3e-12 75.5 81 54.3
PRCOL_00002782 Prasinoderma coloniale HOM05D005783 ORTHO05D007042 2.5e-11 72.0 81 46.9
Cre05.g237700 Chlamydomonas reinhardtii HOM05D005783 ORTHO05D007042 4.3e-11 71.2 83 45.8
HanXRQChr10g0280801 Helianthus annuus HOM05D005783 ORTHO05D007042 5.6e-11 70.9 69 59.4
unitig_0.g159 Utricularia gibba HOM05D005783 ORTHO05D007042 7.3e-11 70.5 61 62.3
BcaC03g16291 Brassica carinata HOM05D005783 ORTHO05D007042 5.8e-08 60.8 69 50.7
CAN.G304.1 Capsicum annuum HOM05D005783 ORTHO05D007042 5.8e-08 60.8 86 41.9
SGA_v2.0_scaffold1G00624 Striga asiatica HOM05D003718 ORTHO05D004402 2.2e-07 58.9 33 81.8
CSS0019928 Camellia sinensis var. sinensis HOM05D005783 ORTHO05D007042 6.4e-07 57.4 87 41.4
CSS0014186 Camellia sinensis var. sinensis HOM05D005783 ORTHO05D007042 2.4e-06 55.5 32 84.4


User provided reference genes

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