Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4259 Fragaria x ananassa HOM05D005810 ORTHO05D007279 7.3e-217 756.9 375 100.0
FAN05G0700 Fragaria x ananassa HOM05D005810 ORTHO05D007279 2.3e-210 735.3 375 96.8
FAN02G1150 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.1e-209 733.0 375 96.5
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 4.3e-209 731.1 382 95.3
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 4.3e-185 651.4 386 86.8
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 9.7e-177 623.6 321 96.6
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 1.1e-161 573.5 383 76.2
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 7.0e-159 564.3 388 74.5
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 1.3e-152 543.5 389 72.0
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 7.2e-148 527.7 386 68.4
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 6.1e-147 524.6 389 69.9
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 8.3e-144 514.2 386 67.9
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 2.0e-142 509.6 347 72.9
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 5.9e-142 508.1 393 67.2
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 1.0e-141 507.3 355 72.1
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 1.3e-141 506.9 351 72.9
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 2.3e-141 506.1 361 69.5
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 6.6e-141 504.6 345 71.9
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 2.5e-140 502.7 346 71.1
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 2.5e-140 502.7 350 71.1
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 7.2e-140 501.1 393 66.2
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 2.1e-139 499.6 350 71.4
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 2.8e-139 499.2 347 68.6
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 3.6e-139 498.8 392 67.1
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 3.6e-139 498.8 392 67.1
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 8.0e-139 497.7 352 69.0
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 2.0e-137 493.0 356 69.9
Haze_04339 Corylus avellana HOM05D005810 ORTHO05D007279 5.7e-137 491.5 349 69.6
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 9.8e-137 490.7 350 69.4
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 4.9e-136 488.4 380 64.5
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 6.3e-136 488.0 380 66.8
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 8.3e-136 487.6 395 63.5
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 5.4e-135 485.0 400 64.0
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 7.0e-135 484.6 352 68.8
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 1.6e-134 483.4 351 68.9
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 2.0e-134 483.0 354 68.4
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 7.8e-134 481.1 354 67.2
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 2.9e-133 479.2 348 69.0
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 5.0e-133 478.4 380 63.7
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 6.6e-133 478.0 352 68.5
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 6.6e-133 478.0 399 60.4
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 1.5e-132 476.9 404 62.4
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 2.5e-132 476.1 379 63.3
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 3.3e-132 475.7 378 65.3
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 7.3e-132 474.6 376 64.4
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 9.5e-132 474.2 352 66.5
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 9.5e-132 474.2 347 68.3
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 4.7e-131 471.9 361 66.5
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 4.7e-131 471.9 361 66.5
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 4.7e-131 471.9 345 67.8
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 8.0e-131 471.1 372 65.3
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 8.0e-131 471.1 361 65.1
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 1.8e-130 469.9 406 61.3
Solyc01g097600.2 Solanum lycopersicum HOM05D005810 ORTHO05D007279 4.0e-130 468.8 350 67.1
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 8.9e-130 467.6 381 62.2
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 8.9e-130 467.6 350 67.1
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 5.8e-129 464.9 401 61.8
Sopen01g041230 Solanum pennellii HOM05D005810 ORTHO05D007279 5.8e-129 464.9 347 67.1
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 1.3e-128 463.8 353 63.7
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 2.2e-128 463.0 380 61.3
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 6.4e-128 461.5 381 61.7
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 1.2e-126 457.2 353 64.0
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 1.2e-126 457.2 353 64.9
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 3.5e-126 455.7 354 63.8
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 4.6e-126 455.3 416 57.9
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 4.6e-126 455.3 380 61.3
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 4.6e-126 455.3 380 61.3
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 1.0e-125 454.1 380 61.3
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 1.3e-125 453.8 379 61.2
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 1.3e-125 453.8 380 61.6
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 3.9e-125 452.2 344 65.7
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 3.3e-124 449.1 337 65.0
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 2.1e-123 446.4 349 65.9
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 3.1e-122 442.6 360 62.5
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 6.4e-120 434.9 370 62.7
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 4.1e-119 432.2 349 62.8
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 2.1e-118 429.9 312 68.9
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 1.0e-117 427.6 354 62.7
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 1.2e-115 420.6 353 60.9
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 2.8e-115 419.5 388 58.8
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 2.3e-114 416.4 315 66.0
Os05g0509300 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 2.3e-114 416.4 358 59.2
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 4.9e-112 408.7 324 62.0
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 1.1e-111 407.5 352 61.1
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 4.1e-111 405.6 322 64.6
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 1.3e-109 400.6 330 62.4
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 4.7e-107 392.1 292 64.4
Zm00001eb352870 Zea mays HOM05D005810 ORTHO05D007279 1.7e-104 383.6 353 55.8
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 1.9e-103 380.2 314 61.5
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 1.5e-100 370.5 362 54.4
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 1.6e-99 367.1 337 57.3
Dinv13659 Davidia involucrata HOM05D005810 ORTHO05D007279 3.6e-99 365.9 308 60.1
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 2.1e-94 350.1 387 50.1
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 1.3e-93 347.4 314 58.6
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 1.3e-91 340.9 373 49.6
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis HOM05D005810 ORTHO05D007279 3.8e-88 329.3 339 52.2
Os01g0773000 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 7.1e-87 325.1 343 52.5
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 2.2e-80 303.5 207 71.5
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 4.2e-79 299.3 358 44.7
Nitab4.5_0005729g0060 Nicotiana tabacum HOM05D005810 ORTHO05D007279 6.3e-67 258.8 216 61.1
SGA_v2.0_scaffold92G28303 Striga asiatica HOM05D005810 ORTHO05D007279 1.7e-64 250.8 190 63.7
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 8.5e-64 248.4 198 61.6
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 1.9e-63 247.3 454 37.7
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 7.2e-63 245.4 431 37.6
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 7.4e-60 235.3 345 39.7
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 3.0e-53 213.4 149 69.8
Nitab4.5_0005729g0080 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.8e-50 204.1 138 73.9
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 1.3e-48 198.0 363 36.6
TPR.G21485 Trifolium pratense HOM05D005810 ORTHO05D007279 5.0e-48 196.1 164 60.4
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 5.7e-36 156.0 144 55.6
Cre01.g007651 Chlamydomonas reinhardtii HOM05D005810 ORTHO05D007279 2.5e-31 140.6 202 41.6
Zm00001eb281050 Zea mays HOM05D005810 ORTHO05D007279 3.0e-29 133.7 88 70.5
Zm00001eb054900 Zea mays HOM05D005810 ORTHO05D007279 8.3e-27 125.6 100 65.0
SHI07783 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-23 114.8 90 61.1
SHI07786 Sapria himalayana HOM05D005810 ORTHO05D007279 3.1e-13 80.5 67 61.2
Mapoly0027s0098 Marchantia polymorpha HOM05D005810 ORTHO05D007279 3.7e-11 73.6 66 53.0
CsaV3_UNG004080 Cucumis sativus L. HOM05D005810 ORTHO05D007279 8.3e-11 72.4 39 79.5
MBI11_g02497_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 2.7e-09 67.4 73 53.4
HPP92_018612 Vanilla planifolia HOM05D005810 ORTHO05D007279 3.5e-09 67.0 43 67.4
Mapoly0081s0042 Marchantia polymorpha HOM05D005810 ORTHO05D007279 4.6e-09 66.6 43 67.4
Lsat_1_v5_gn_5_94521 Lactuca sativa HOM05D000428 ORTHO05D022850 1.5e-07 61.6 158 30.4


User provided reference genes

Program Settings