Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0167 Fragaria x ananassa HOM05D015290 ORTHO05D045832 3.8e-136 488.4 292 100.0
FvH4_6g01000 Fragaria vesca HOM05D015290 ORTHO05D045832 5.5e-135 484.6 292 99.0
FAN02G1167 Fragaria x ananassa HOM05D015290 ORTHO05D202792 4.2e-127 458.4 292 86.6
FAN09G3931 Fragaria x ananassa HOM05D015290 ORTHO05D202567 2.3e-61 240.0 149 82.6
FvH4_6g00990 Fragaria vesca HOM05D015290 ORTHO05D029362 3.4e-44 183.0 222 47.7
FAN14G1528 Fragaria x ananassa HOM05D015290 ORTHO05D029362 3.4e-44 183.0 222 47.7
FAN09G4191 Fragaria x ananassa HOM05D015290 ORTHO05D210857 1.3e-43 181.0 125 72.8
FAN09G0277 Fragaria x ananassa HOM05D015290 ORTHO05D029362 9.3e-42 174.9 205 48.8
FAN05G1080 Fragaria x ananassa HOM05D015290 ORTHO05D029362 1.1e-39 167.9 222 45.0
FAN14G4654 Fragaria x ananassa HOM05D000980 ORTHO05D000649 2.6e-12 77.0 240 29.6
FAN09G3547 Fragaria x ananassa HOM05D000980 ORTHO05D000649 1.3e-11 74.7 240 29.6
RcHm_v2.0_Chr3g0448411 Rosa chinensis HOM05D000980 ORTHO05D000649 3.8e-11 73.2 241 27.8
Nitab4.5_0001287g0050 Nicotiana tabacum HOM05D000980 ORTHO05D000649 6.5e-11 72.4 223 25.6
Nitab4.5_0003810g0010 Nicotiana tabacum HOM05D000980 ORTHO05D000649 6.5e-11 72.4 223 26.0
Nitab4.5_0003810g0020 Nicotiana tabacum HOM05D000980 ORTHO05D000649 1.4e-10 71.2 223 26.5
TAR633G1869 Trochodendron aralioides HOM05D000980 ORTHO05D000649 1.9e-10 70.9 224 27.2
CiPaw.10G016300 Carya illinoinensis HOM05D000980 ORTHO05D000649 4.2e-10 69.7 224 23.7
Peaxi162Scf00939g00215 Petunia axillaris HOM05D000980 ORTHO05D000649 1.2e-09 68.2 229 26.2
CAN.G1245.11 Capsicum annuum HOM05D000980 ORTHO05D000649 2.7e-09 67.0 228 25.0
QL07p037054 Quercus lobata HOM05D000980 ORTHO05D000649 2.7e-09 67.0 218 27.5
QL07p037057 Quercus lobata HOM05D000980 ORTHO05D000649 2.7e-09 67.0 222 24.8
Rhsim07G0207200 Rhododendron simsii HOM05D000980 ORTHO05D000649 2.7e-09 67.0 218 28.4
CAN.G1245.12 Capsicum annuum HOM05D000980 ORTHO05D000649 4.6e-09 66.2 223 24.7
Thhalv10014557m.g Eutrema salsugineum HOM05D000980 ORTHO05D000649 4.6e-09 66.2 222 27.9
BcaB01g05988 Brassica carinata HOM05D000980 ORTHO05D000649 6.1e-09 65.9 222 28.8
Duzib106G0118 Durio zibethinus HOM05D000980 ORTHO05D000649 6.1e-09 65.9 216 25.9
Prupe.6G357300 Prunus persica HOM05D000980 ORTHO05D000649 6.1e-09 65.9 205 29.3
Psat3g029800 Pisum sativum HOM05D000980 ORTHO05D000649 7.9e-09 65.5 224 25.4
C03p03080 Brassica napus HOM05D000980 ORTHO05D000649 1.0e-08 65.1 222 28.4
Rhsim07G0206100 Rhododendron simsii HOM05D000980 ORTHO05D000649 2.3e-08 63.9 122 31.1
AL6G16360 Arabidopsis lyrata HOM05D000980 ORTHO05D000649 3.0e-08 63.5 222 27.0
CiPaw.10G016400 Carya illinoinensis HOM05D000980 ORTHO05D000649 3.0e-08 63.5 222 27.0
TAR636G2632 Trochodendron aralioides HOM05D000980 ORTHO05D000649 3.9e-08 63.2 224 25.0
AT5G06320 Arabidopsis thaliana HOM05D000980 ORTHO05D000649 5.1e-08 62.8 222 27.0
BolC3t12856H Brassica oleracea HOM05D000980 ORTHO05D000649 5.1e-08 62.8 222 26.6
Nn2g14272 Nelumbo nucifera HOM05D000980 ORTHO05D000649 5.1e-08 62.8 222 27.9
Nitab4.5_0003810g0030 Nicotiana tabacum HOM05D000980 ORTHO05D000649 5.1e-08 62.8 122 31.1
Rhsim07G0206200 Rhododendron simsii HOM05D000980 ORTHO05D000649 6.7e-08 62.4 224 26.3
Rhsim07G0207300 Rhododendron simsii HOM05D000980 ORTHO05D000649 6.7e-08 62.4 224 26.3
AL4G31510 Arabidopsis lyrata HOM05D000980 ORTHO05D000649 8.7e-08 62.0 225 24.4
THA.LOC104804070 Tarenaya hassleriana HOM05D000980 ORTHO05D000649 8.7e-08 62.0 224 24.6
CANSAT64G0277 Cannabis sativa HOM05D000980 ORTHO05D000649 1.1e-07 61.6 223 23.8
Medtr7g105870 Medicago truncatula HOM05D000980 ORTHO05D000649 1.5e-07 61.2 224 24.6
FAN01G0115 Fragaria x ananassa HOM05D000980 ORTHO05D017920 1.9e-07 60.8 126 35.7
Sp6g36530 Schrenkiella parvula HOM05D000980 ORTHO05D000649 1.9e-07 60.8 222 26.1
Peaxi162Scf00211g00128 Petunia axillaris HOM05D000980 ORTHO05D000649 3.3e-07 60.1 129 28.7
Aqoxy1G00689 Aquilegia oxysepala HOM05D000980 ORTHO05D000649 4.3e-07 59.7 130 27.7
Ca_28071_v3 Cicer arietinum L. HOM05D000980 ORTHO05D000649 4.3e-07 59.7 224 24.6
Nitab4.5_0001287g0070 Nicotiana tabacum HOM05D000980 ORTHO05D000649 4.3e-07 59.7 129 29.5
Sed0022825 Sechium edule HOM05D000980 ORTHO05D000649 4.3e-07 59.7 113 33.6
TPR.G30759 Trifolium pratense HOM05D000980 ORTHO05D000649 4.3e-07 59.7 126 32.5
Lalb_Chr20g0111421 Lupinus albus HOM05D000980 ORTHO05D000649 5.7e-07 59.3 224 23.2
Nitab4.5_0003105g0020 Nicotiana tabacum HOM05D000980 ORTHO05D000649 5.7e-07 59.3 225 23.1
RhsimUnG0249100 Rhododendron simsii HOM05D000980 ORTHO05D000649 5.7e-07 59.3 58 46.6
BcaB01g05729 Brassica carinata HOM05D000980 ORTHO05D000649 7.4e-07 58.9 222 27.5
BcaNung06317 Brassica carinata HOM05D000980 ORTHO05D000649 7.4e-07 58.9 222 26.6
BolC1t05301H Brassica oleracea HOM05D000980 ORTHO05D000649 7.4e-07 58.9 224 26.8
Cfa017239 Carpinus fangiana HOM05D000980 ORTHO05D000649 7.4e-07 58.9 238 25.2
CiPaw.09G019900 Carya illinoinensis HOM05D000980 ORTHO05D000649 7.4e-07 58.9 106 32.1
TPR.G23319 Trifolium pratense HOM05D000980 ORTHO05D000649 7.4e-07 58.9 224 23.7
TAR633G0806 Trochodendron aralioides HOM05D000980 ORTHO05D000649 7.4e-07 58.9 131 29.8
Carub.0003s1097 Capsella rubella HOM05D000980 ORTHO05D000649 9.7e-07 58.5 101 33.7
CARHR086200 Cardamine hirsuta HOM05D000980 ORTHO05D000649 9.7e-07 58.5 101 32.7
Migut.J00714 Erythranthe guttata HOM05D000980 ORTHO05D000649 9.7e-07 58.5 214 24.8
Sopen10g032500 Solanum pennellii HOM05D000980 ORTHO05D000649 9.7e-07 58.5 129 30.2
CiPaw.10G009200 Carya illinoinensis HOM05D000980 ORTHO05D000649 1.3e-06 58.2 98 33.7
FvH4_7g32184 Fragaria vesca HOM05D000980 ORTHO05D017920 1.3e-06 58.2 111 37.8
FvH4_7g32210 Fragaria vesca HOM05D000980 ORTHO05D017920 1.3e-06 58.2 219 28.3
FAN06G3719 Fragaria x ananassa HOM05D000553 ORTHO05D017920 1.3e-06 58.2 111 37.8
Gorai.006G150200 Gossypium raimondii HOM05D000980 ORTHO05D000649 1.3e-06 58.2 106 34.0
Thecc.05G102200 Theobroma cacao HOM05D000980 ORTHO05D000649 1.3e-06 58.2 217 24.4
BcaB06g25596 Brassica carinata HOM05D000980 ORTHO05D000649 1.6e-06 57.8 102 38.2
A03p02680 Brassica napus HOM05D000980 ORTHO05D000649 1.6e-06 57.8 101 35.6
BraA03t09630Z Brassica rapa HOM05D000980 ORTHO05D000649 1.6e-06 57.8 101 35.6
Thhalv10021416m.g Eutrema salsugineum HOM05D000980 ORTHO05D000649 1.6e-06 57.8 114 34.2
FAN14G5912 Fragaria x ananassa HOM05D000980 ORTHO05D000649 1.6e-06 57.8 117 31.6
Nn6g34729 Nelumbo nucifera HOM05D000980 ORTHO05D000649 1.6e-06 57.8 110 33.6
PGR142G4095 Punica granatum HOM05D000980 ORTHO05D000649 1.6e-06 57.8 218 25.2
Solyc10g081980.2 Solanum lycopersicum HOM05D000980 ORTHO05D000649 1.6e-06 57.8 129 28.7
Aa31sc52G130 Aethionema arabicum HOM05D000980 ORTHO05D000649 2.2e-06 57.4 122 30.3
A05p37700 Brassica napus HOM05D000980 ORTHO05D000649 2.2e-06 57.4 102 36.3
BraA05t22565Z Brassica rapa HOM05D000980 ORTHO05D000649 2.2e-06 57.4 102 36.3
Carub.0006s0521 Capsella rubella HOM05D000980 ORTHO05D000649 2.2e-06 57.4 222 24.8
CARHR207060 Cardamine hirsuta HOM05D000980 ORTHO05D000649 2.2e-06 57.4 222 25.7
CiPaw.10G016500 Carya illinoinensis HOM05D000980 ORTHO05D000649 2.2e-06 57.4 104 32.7
Gohir.D09G131600 Gossypium hirsutum HOM05D000980 ORTHO05D000649 2.2e-06 57.4 104 34.6
QL07p036985 Quercus lobata HOM05D000980 ORTHO05D000649 2.2e-06 57.4 106 34.0
PGSC0003DMG400028235 Solanum tuberosum HOM05D000980 ORTHO05D000649 2.2e-06 57.4 129 28.7
C09p70460 Brassica napus HOM05D000980 ORTHO05D000649 2.8e-06 57.0 122 32.0
Haze_19700 Corylus avellana HOM05D000980 ORTHO05D000649 2.8e-06 57.0 222 25.2
Duzib093G0606 Durio zibethinus HOM05D000980 ORTHO05D000649 2.8e-06 57.0 222 24.8
Glyma.03G201100 Glycine max HOM05D000980 ORTHO05D000649 2.8e-06 57.0 224 29.0
Gohir.A09G135000 Gossypium hirsutum HOM05D000980 ORTHO05D000649 2.8e-06 57.0 104 34.6
MD12G1038600 Malus domestica HOM05D000980 ORTHO05D000649 2.8e-06 57.0 228 23.2
FAN05G4611 Fragaria x ananassa HOM05D000980 ORTHO05D000649 3.7e-06 56.6 117 32.5
PGSC0003DMG400028153 Solanum tuberosum HOM05D000980 ORTHO05D000649 3.7e-06 56.6 129 27.9
CSS0004876 Camellia sinensis var. sinensis HOM05D000980 ORTHO05D000649 4.8e-06 56.2 101 31.7
CSS0021498 Camellia sinensis var. sinensis HOM05D000980 ORTHO05D000649 4.8e-06 56.2 101 31.7
CSS0049475 Camellia sinensis var. sinensis HOM05D000980 ORTHO05D000649 4.8e-06 56.2 101 31.7
CANSAT64G0988 Cannabis sativa HOM05D000980 ORTHO05D000649 4.8e-06 56.2 67 43.3
CiPaw.09G020000 Carya illinoinensis HOM05D000980 ORTHO05D000649 4.8e-06 56.2 104 30.8
Sopen10g032480 Solanum pennellii HOM05D000980 ORTHO05D000649 4.8e-06 56.2 129 27.9
Sopen10g032490 Solanum pennellii HOM05D000980 ORTHO05D000649 4.8e-06 56.2 129 27.9
PGSC0003DMG400028152 Solanum tuberosum HOM05D000980 ORTHO05D000649 4.8e-06 56.2 129 27.9
THA.LOC104823631 Tarenaya hassleriana HOM05D000980 ORTHO05D000649 4.8e-06 56.2 106 31.1
Actinidia07938 Actinidia chinensis HOM05D000980 ORTHO05D000649 6.3e-06 55.8 112 31.2
Ciclev10012678m.g Citrus clementina HOM05D000980 ORTHO05D000649 6.3e-06 55.8 55 50.9
FvH4_6g18540 Fragaria vesca HOM05D000980 ORTHO05D000649 6.3e-06 55.8 223 26.5
FvH4_6g18570 Fragaria vesca HOM05D000980 ORTHO05D000649 6.3e-06 55.8 117 30.8
FAN02G0899 Fragaria x ananassa HOM05D000980 ORTHO05D000649 6.3e-06 55.8 224 24.1
FAN02G2957 Fragaria x ananassa HOM05D000980 ORTHO05D000649 6.3e-06 55.8 117 32.5
FAN09G1510 Fragaria x ananassa HOM05D000980 ORTHO05D000649 6.3e-06 55.8 224 24.1
Glyma.19G198700 Glycine max HOM05D000980 ORTHO05D000649 6.3e-06 55.8 215 28.8
RcHm_v2.0_Chr3g0475631 Rosa chinensis HOM05D000980 ORTHO05D000649 6.3e-06 55.8 221 24.4
Sp3g09880 Schrenkiella parvula HOM05D000980 ORTHO05D000649 6.3e-06 55.8 102 34.3
AT2G35460 Arabidopsis thaliana HOM05D000980 ORTHO05D000649 8.2e-06 55.5 131 29.0
BraA01t04170Z Brassica rapa HOM05D000980 ORTHO05D000649 8.2e-06 55.5 102 34.3
Haze_19696 Corylus avellana HOM05D000980 ORTHO05D000649 8.2e-06 55.5 59 45.8
ECA238G3008 Erigeron canadensis HOM05D000980 ORTHO05D000649 8.2e-06 55.5 54 44.4
Psat1g030120 Pisum sativum HOM05D000980 ORTHO05D000649 8.2e-06 55.5 126 30.2


User provided reference genes

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