Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G3028 Fragaria x ananassa HOM05D002263 ORTHO05D016312 3.3e-43 177.9 88 100.0
FAN05G0547 Fragaria x ananassa HOM05D002263 ORTHO05D016312 4.8e-34 147.5 88 85.2
FAN05G1023 Fragaria x ananassa HOM05D002263 ORTHO05D016312 3.1e-33 144.8 86 84.9
FAN09G0839 Fragaria x ananassa HOM05D002263 ORTHO05D016312 9.9e-32 139.8 86 81.4
FvH4_7g01280 Fragaria vesca HOM05D002263 ORTHO05D003537 1.6e-21 105.9 63 84.1
FAN01G0038 Fragaria x ananassa HOM05D002263 ORTHO05D003537 1.6e-21 105.9 63 84.1
FAN03G0380 Fragaria x ananassa HOM05D002263 ORTHO05D003537 1.6e-21 105.9 63 84.1
FAN06G0127 Fragaria x ananassa HOM05D002263 ORTHO05D003537 1.6e-21 105.9 63 84.1
FAN10G1377 Fragaria x ananassa HOM05D002263 ORTHO05D003537 1.6e-21 105.9 63 84.1
FAN01G1372 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.8e-20 102.4 59 84.7
FAN21G0405 Fragaria x ananassa HOM05D002263 ORTHO05D016312 5.1e-20 100.9 57 86.0
RcHm_v2.0_Chr1g0317031 Rosa chinensis HOM05D002263 ORTHO05D003537 9.7e-19 96.7 67 76.1
CANSAT80G1724 Cannabis sativa HOM05D002263 ORTHO05D003537 1.3e-18 96.3 63 77.8
arahy.Tifrunner.gnm1.ann1.CKFG51 Arachis hypogaea HOM05D002263 ORTHO05D003537 4.1e-17 91.3 66 68.2
arahy.Tifrunner.gnm1.ann1.ES5MTE Arachis hypogaea HOM05D002263 ORTHO05D003537 4.1e-17 91.3 66 68.2
BcaNung00438 Brassica carinata HOM05D002263 ORTHO05D003537 5.3e-17 90.9 55 76.4
AL3G38880 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 1.5e-16 89.4 62 72.6
Lalb_Chr19g0140281 Lupinus albus HOM05D002263 ORTHO05D003537 1.5e-16 89.4 69 63.8
Rhsim01G0127100 Rhododendron simsii HOM05D002263 ORTHO05D003537 2.0e-16 89.0 62 71.0
Rhsim01G0128300 Rhododendron simsii HOM05D002263 ORTHO05D003537 2.0e-16 89.0 62 71.0
BcaC09g51672 Brassica carinata HOM05D002263 ORTHO05D003537 2.6e-16 88.6 60 75.0
C01p10550 Brassica napus HOM05D002263 ORTHO05D003537 2.6e-16 88.6 60 75.0
BolC1t01018H Brassica oleracea HOM05D002263 ORTHO05D003537 2.6e-16 88.6 60 75.0
CSS0021570 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 2.6e-16 88.6 60 73.3
CSS0033402 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 2.6e-16 88.6 60 73.3
CAN.G219.44 Capsicum annuum HOM05D002263 ORTHO05D003537 2.6e-16 88.6 63 66.7
GSVIVG01032138001 Vitis vinifera HOM05D002263 ORTHO05D003537 2.6e-16 88.6 61 72.1
CARHR061100 Cardamine hirsuta HOM05D002263 ORTHO05D003537 3.4e-16 88.2 61 70.5
Phvul.005G024200 Phaseolus vulgaris HOM05D002263 ORTHO05D003537 3.4e-16 88.2 58 74.1
THA.LOC104820131 Tarenaya hassleriana HOM05D002263 ORTHO05D003537 4.5e-16 87.8 58 74.1
BraA01t00849Z Brassica rapa HOM05D002263 ORTHO05D003537 5.9e-16 87.4 60 73.3
VMungo1080G1747 Vigna mungo HOM05D002263 ORTHO05D003537 5.9e-16 87.4 55 78.2
A01p09010 Brassica napus HOM05D002263 ORTHO05D003537 7.7e-16 87.0 61 72.1
Carub.0003s2419 Capsella rubella HOM05D002263 ORTHO05D003537 7.7e-16 87.0 59 74.6
Prupe.2G017500 Prunus persica HOM05D002263 ORTHO05D003537 7.7e-16 87.0 64 68.8
Prupe.2G018500 Prunus persica HOM05D002263 ORTHO05D003537 7.7e-16 87.0 64 68.8
Lj3g0016100 Lotus japonicus HOM05D002263 ORTHO05D003537 1.0e-15 86.7 62 67.7
TAR369G0754 Trochodendron aralioides HOM05D002263 ORTHO05D003537 1.0e-15 86.7 65 69.2
TAR623G1165 Trochodendron aralioides HOM05D002263 ORTHO05D003537 1.0e-15 86.7 65 69.2
BcaNung01342 Brassica carinata HOM05D002263 ORTHO05D003537 1.3e-15 86.3 65 67.7
PGSC0003DMG400006793 Solanum tuberosum HOM05D002263 ORTHO05D003537 1.3e-15 86.3 63 65.1
CiPaw.14G001600 Carya illinoinensis HOM05D002263 ORTHO05D003537 1.7e-15 85.9 66 66.7
Thhalv10024219m.g Eutrema salsugineum HOM05D002263 ORTHO05D003537 1.7e-15 85.9 61 72.1
Nn7g36258 Nelumbo nucifera HOM05D002263 ORTHO05D003537 1.7e-15 85.9 65 69.2
AT3G23890 Arabidopsis thaliana HOM05D002263 ORTHO05D003537 2.2e-15 85.5 65 67.7
CiPaw.05G149100 Carya illinoinensis HOM05D002263 ORTHO05D003537 2.2e-15 85.5 66 66.7
Sopen01g034420 Solanum pennellii HOM05D002263 ORTHO05D003537 2.2e-15 85.5 62 66.1
TWI09G0750 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 2.2e-15 85.5 59 72.9
vmacro14860 Vaccinium macrocarpon HOM05D002263 ORTHO05D003537 2.2e-15 85.5 68 64.7
Aa31LG5G18570 Aethionema arabicum HOM05D002263 ORTHO05D003537 2.9e-15 85.1 58 72.4
Ciclev10030505m.g Citrus clementina HOM05D002263 ORTHO05D003537 2.9e-15 85.1 67 65.7
TWI73G0071 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 2.9e-15 85.1 59 72.9
MELO3C023986.2 Cucumis melo HOM05D002263 ORTHO05D003537 3.8e-15 84.7 65 69.2
Hma1.2p1_2160F.1_g315570 Hydrangea macrophylla HOM05D002263 ORTHO05D003537 3.8e-15 84.7 60 71.7
Dinv43424 Davidia involucrata HOM05D002263 ORTHO05D003537 5.0e-15 84.3 70 64.3
Nitab4.5_0002918g0080 Nicotiana tabacum HOM05D002263 ORTHO05D003537 5.0e-15 84.3 62 66.1
CsaV3_3G032050 Cucumis sativus L. HOM05D002263 ORTHO05D003537 6.5e-15 84.0 63 71.4
MD07G1017700 Malus domestica HOM05D002263 ORTHO05D003537 6.5e-15 84.0 64 67.2
Mapoly0050s0134 Marchantia polymorpha HOM05D002263 ORTHO05D003537 6.5e-15 84.0 55 69.1
Psat7g085320 Pisum sativum HOM05D002263 ORTHO05D003537 6.5e-15 84.0 60 68.3
SalBow5G1665 Salvia bowleyana HOM05D002263 ORTHO05D003537 6.5e-15 84.0 66 65.2
Cc02_g28170 Coffea canephora HOM05D002263 ORTHO05D003537 8.5e-15 83.6 59 71.2
Solyc01g087500.3 Solanum lycopersicum HOM05D002263 ORTHO05D003537 8.5e-15 83.6 62 64.5
Oeu049493.1 Olea europaea HOM05D002263 ORTHO05D003537 1.1e-14 83.2 68 61.8
Eucgr.H02748 Eucalyptus grandis HOM05D002263 ORTHO05D003537 1.4e-14 82.8 61 68.9
FAN26G0899 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.4e-14 82.8 54 74.1
FAN26G1597 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.4e-14 82.8 54 74.1
Nn2g15271 Nelumbo nucifera HOM05D002263 ORTHO05D003537 1.4e-14 82.8 60 70.0
Nitab4.5_0000707g0240 Nicotiana tabacum HOM05D002263 ORTHO05D003537 1.4e-14 82.8 62 64.5
Psat0s825g0040 Pisum sativum HOM05D002263 ORTHO05D003537 1.4e-14 82.8 60 66.7
Sed0024297 Sechium edule HOM05D002263 ORTHO05D003537 1.4e-14 82.8 63 65.1
TPR.G22438 Trifolium pratense HOM05D002263 ORTHO05D003537 1.4e-14 82.8 60 66.7
TPR.G27843 Trifolium pratense HOM05D002263 ORTHO05D003537 1.4e-14 82.8 60 66.7
Ca_14467_v3 Cicer arietinum L. HOM05D002263 ORTHO05D003537 1.9e-14 82.4 60 66.7
Sp7g26900 Schrenkiella parvula HOM05D002263 ORTHO05D003537 1.9e-14 82.4 61 68.9
Atru.chr11.2587 Acer truncatum HOM05D002263 ORTHO05D003537 2.5e-14 82.0 64 67.2
MD02G1308000 Malus domestica HOM05D002263 ORTHO05D003537 2.5e-14 82.0 65 64.6
Zm00001eb188030 Zea mays HOM05D002263 ORTHO05D003537 2.5e-14 82.0 57 66.7
ClCG10G012270 Citrullus lanatus HOM05D002263 ORTHO05D003537 3.2e-14 81.6 63 65.1
Glyma.10G090000 Glycine max HOM05D002263 ORTHO05D003537 3.2e-14 81.6 59 67.8
Sed0008745 Sechium edule HOM05D002263 ORTHO05D003537 3.2e-14 81.6 63 68.3
Glyma.15G276000 Glycine max HOM05D002263 ORTHO05D003537 4.2e-14 81.3 59 67.8
QL04p008574 Quercus lobata HOM05D002263 ORTHO05D003537 4.2e-14 81.3 74 62.2
PGR031G1196 Punica granatum HOM05D002263 ORTHO05D003537 5.5e-14 80.9 60 68.3
QL04p008074 Quercus lobata HOM05D002263 ORTHO05D003537 5.5e-14 80.9 74 62.2
Eucgr.H02633 Eucalyptus grandis HOM05D002263 ORTHO05D003537 7.2e-14 80.5 64 64.1
Medtr3g031040 Medicago truncatula HOM05D002263 ORTHO05D003537 7.2e-14 80.5 58 67.2
Cfa010797 Carpinus fangiana HOM05D002263 ORTHO05D003537 9.4e-14 80.1 69 60.9
Hund15422 Selenicereus undatus HOM05D002263 ORTHO05D003537 9.4e-14 80.1 77 54.5
Actinidia31076 Actinidia chinensis HOM05D002263 ORTHO05D003537 1.2e-13 79.7 62 64.5
ATR0332G038 Amborella trichopoda HOM05D002263 ORTHO05D003537 1.2e-13 79.7 67 58.2
Haze_03174 Corylus avellana HOM05D002263 ORTHO05D003537 1.2e-13 79.7 69 60.9
Gohir.A10G219600 Gossypium hirsutum HOM05D002263 ORTHO05D003537 1.2e-13 79.7 58 69.0
Gohir.D10G229100 Gossypium hirsutum HOM05D002263 ORTHO05D003537 1.2e-13 79.7 58 69.0
Gorai.011G261600 Gossypium raimondii HOM05D002263 ORTHO05D003537 1.2e-13 79.7 58 69.0
Manes.10G140100 Manihot esculenta HOM05D002263 ORTHO05D003537 1.6e-13 79.3 59 67.8
Peaxi162Scf00744g00349 Petunia axillaris HOM05D002263 ORTHO05D003537 1.6e-13 79.3 62 59.7
Duzib106G1002 Durio zibethinus HOM05D002263 ORTHO05D003537 2.1e-13 79.0 58 69.0
Thecc.10G041300 Theobroma cacao HOM05D002263 ORTHO05D003537 2.1e-13 79.0 58 69.0
unitig_8.g3777 Utricularia gibba HOM05D002263 ORTHO05D003537 2.1e-13 79.0 65 61.5
arahy.Tifrunner.gnm1.ann1.VJ5EI6 Arachis hypogaea HOM05D002263 ORTHO05D003537 2.7e-13 78.6 61 67.2
arahy.Tifrunner.gnm1.ann1.NCP65V Arachis hypogaea HOM05D002263 ORTHO05D003537 3.6e-13 78.2 61 67.2
MSTRG.20571 Avicennia marina HOM05D002263 ORTHO05D003537 3.6e-13 78.2 67 62.7
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 3.6e-13 78.2 63 63.5
AUR62023080 Chenopodium quinoa HOM05D002263 ORTHO05D003537 3.6e-13 78.2 67 61.2
ECA248G0809 Erigeron canadensis HOM05D002263 ORTHO05D003537 3.6e-13 78.2 58 62.1
Lj9C634T13 Lonicera japonica HOM05D002263 ORTHO05D003537 3.6e-13 78.2 59 64.4
FAN09G4539 Fragaria x ananassa HOM05D002263 ORTHO05D016312 4.6e-13 77.8 59 69.5
Potri.001G264000 Populus trichocarpa HOM05D002263 ORTHO05D003537 4.6e-13 77.8 57 68.4
CDE10G0015 Ceratophyllum demersum HOM05D002263 ORTHO05D003537 6.1e-13 77.4 64 64.1
Zm00001eb251620 Zea mays HOM05D002263 ORTHO05D003537 6.1e-13 77.4 57 63.2
Aqoxy2G00154 Aquilegia oxysepala HOM05D002263 ORTHO05D003537 7.9e-13 77.0 56 67.9
DCAR_022381 Daucus carota HOM05D002263 ORTHO05D003537 7.9e-13 77.0 57 66.7
PSO832G4242 Papaver somniferum HOM05D002263 ORTHO05D003537 7.9e-13 77.0 68 60.3
AagrBONN_evm.TU.Sc2ySwM_344.3755 Anthoceros agrestis HOM05D002263 ORTHO05D003537 1.4e-12 76.3 65 61.5
COL.COLO4_15050 Corchorus olitorius HOM05D002263 ORTHO05D003537 1.4e-12 76.3 56 69.6
SEGI_10251 Sequoiadendron giganteum HOM05D002263 ORTHO05D003537 1.4e-12 76.3 59 62.7
Lsat_1_v5_gn_1_105720 Lactuca sativa HOM05D002263 ORTHO05D003537 1.8e-12 75.9 69 60.9
SGA_v2.0_scaffold119G32746 Striga asiatica HOM05D002263 ORTHO05D003537 1.8e-12 75.9 64 62.5
AUR62009398 Chenopodium quinoa HOM05D002263 ORTHO05D003537 2.3e-12 75.5 78 51.3
PSO063G6561 Papaver somniferum HOM05D002263 ORTHO05D003537 2.3e-12 75.5 67 61.2
unitig_22.g5326 Utricularia gibba HOM05D002263 ORTHO05D003537 2.3e-12 75.5 64 62.5
Sed0003769 Sechium edule HOM05D002263 ORTHO05D003537 3.9e-12 74.7 59 61.0
HPP92_014707 Vanilla planifolia HOM05D002263 ORTHO05D003537 5.1e-12 74.3 63 58.7
SMO147G0130 Selaginella moellendorffii HOM05D002263 ORTHO05D003537 6.7e-12 73.9 44 75.0
SMO330G0020 Selaginella moellendorffii HOM05D002263 ORTHO05D003537 6.7e-12 73.9 44 75.0
Lj2C383G13 Lonicera japonica HOM05D002263 ORTHO05D003537 8.8e-12 73.6 63 60.3
Pp3c19_3610 Physcomitrium patens HOM05D002263 ORTHO05D003537 1.1e-11 73.2 72 54.2
Sabra16G0162200 Salix brachista HOM05D002263 ORTHO05D016312 2.0e-11 72.4 41 80.5
Ah.10g038760 Amaranthus hybridus HOM05D002263 ORTHO05D003537 2.5e-11 72.0 79 45.6
MBI02_g23141_MAGBIO Magnolia biondii HOM05D002263 ORTHO05D003537 2.5e-11 72.0 68 57.4
SEGI_32368 Sequoiadendron giganteum HOM05D002263 ORTHO05D003537 4.3e-11 71.2 60 60.0
Migut.B01281 Erythranthe guttata HOM05D002263 ORTHO05D003537 1.7e-10 69.3 41 75.6
Pp3c18_20260 Physcomitrium patens HOM05D002263 ORTHO05D003537 1.7e-10 69.3 70 54.3
Pp3c18_20261 Physcomitrium patens HOM05D002263 ORTHO05D003537 1.7e-10 69.3 70 54.3
Potri.009G058900 Populus trichocarpa HOM05D002263 ORTHO05D003537 1.7e-10 69.3 59 59.3
Sabra09G0043200 Salix brachista HOM05D002263 ORTHO05D003537 2.2e-10 68.9 59 59.3
RhsimUnG0044300 Rhododendron simsii HOM05D002263 ORTHO05D003537 2.8e-10 68.6 63 60.3
Sc16g0001930 Simmondsia chinensis HOM05D002263 ORTHO05D003537 6.3e-10 67.4 39 71.8
Ah.02g122490 Amaranthus hybridus HOM05D002263 ORTHO05D003537 1.1e-09 66.6 39 79.5
Os02g0699700 Oryza sativa ssp. japonica HOM05D002263 ORTHO05D003537 1.1e-09 66.6 58 58.6
CBR_g55332 Chara braunii HOM05D002263 ORTHO05D003537 1.8e-09 65.9 63 52.4
Ah.06g183060 Amaranthus hybridus HOM05D002263 ORTHO05D003537 2.4e-09 65.5 39 76.9
HanXRQChr01g0016471 Helianthus annuus HOM05D002263 ORTHO05D003537 2.4e-09 65.5 63 52.4
HanXRQChr14g0447821 Helianthus annuus HOM05D002263 ORTHO05D003537 2.4e-09 65.5 40 72.5
PRCOL_00004802 Prasinoderma coloniale HOM05D002263 ORTHO05D003537 9.1e-09 63.5 56 55.4
Cre01.g009250 Chlamydomonas reinhardtii HOM05D002263 ORTHO05D003537 2.0e-08 62.4 53 60.4
MCO05G739 Micromonas commoda HOM05D002263 ORTHO05D003537 2.0e-08 62.4 44 61.4
AL8G27570 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 2.2e-07 58.9 60 50.0
Rhsim09G0080900 Rhododendron simsii HOM05D002263 ORTHO05D003537 2.2e-07 58.9 51 56.9
AL8G14170 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 3.8e-07 58.2 60 48.3
SGA_v2.0_scaffold147G36324 Striga asiatica HOM05D002263 ORTHO05D016312 3.2e-06 55.1 38 63.2


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