Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 0.0e+00 1400.6 698 100.0
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 0.0e+00 1346.6 706 95.5
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 0.0e+00 1322.4 669 98.5
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 0.0e+00 1311.2 666 97.6
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 0.0e+00 1302.7 668 96.9
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 0.0e+00 1194.5 683 89.2
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 0.0e+00 1136.3 677 85.1
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 0.0e+00 1097.0 682 80.9
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 3.2e-298 1028.1 688 74.7
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 1.7e-296 1022.3 683 75.0
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 3.9e-296 1021.1 688 75.4
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 1.2e-292 1009.6 691 74.1
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 2.6e-292 1008.4 717 71.1
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 4.4e-292 1007.7 678 74.9
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 9.9e-292 1006.5 695 73.7
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 1.9e-290 1002.3 690 74.2
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 3.2e-290 1001.5 689 74.2
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 5.4e-290 1000.7 689 74.0
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 3.9e-288 994.6 685 73.7
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 8.7e-288 993.4 640 75.3
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 2.5e-287 991.9 677 73.6
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.2e-286 989.6 675 73.3
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 1.1e-285 986.5 711 70.5
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 2.4e-285 985.3 692 71.8
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 9.0e-285 983.4 686 71.3
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 1.2e-284 983.0 686 72.7
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 2.0e-284 982.2 661 73.4
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 2.9e-283 978.4 703 71.7
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 4.2e-282 974.5 688 72.4
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 9.3e-282 973.4 684 71.1
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 2.1e-281 972.2 620 75.6
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 2.7e-281 971.8 678 72.1
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 8.7e-280 966.8 680 71.6
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 5.6e-279 964.1 678 73.5
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.3e-278 963.0 683 71.7
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 1.6e-278 962.6 684 72.4
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 2.8e-278 961.8 681 72.1
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 3.6e-278 961.4 671 71.2
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 3.4e-276 954.9 676 71.9
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 5.8e-276 954.1 684 71.5
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 1.3e-275 953.0 680 70.6
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 2.9e-275 951.8 672 70.7
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 3.8e-275 951.4 668 69.9
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 4.9e-275 951.0 681 72.0
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 2.4e-274 948.7 684 69.3
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 2.7e-273 945.3 686 69.4
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 3.5e-273 944.9 683 70.1
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 3.5e-273 944.9 670 69.7
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 3.9e-272 941.4 695 69.4
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 8.1e-270 933.7 688 68.8
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.8e-269 932.6 679 69.5
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 3.1e-269 931.8 680 69.4
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 9.0e-269 930.2 692 68.2
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 1.2e-268 929.9 687 69.9
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 1.5e-268 929.5 588 75.5
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 4.5e-268 927.9 691 69.9
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 7.6e-268 927.2 692 68.1
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 1.3e-267 926.4 687 69.4
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 2.2e-267 925.6 631 72.1
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 2.9e-267 925.2 678 69.5
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 6.4e-267 924.1 684 68.0
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 1.4e-266 922.9 637 71.1
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 2.5e-266 922.2 674 69.7
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 3.2e-266 921.8 684 66.5
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 9.3e-266 920.2 630 72.2
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 1.0e-264 916.8 668 69.6
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 6.7e-264 914.1 620 72.7
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 1.9e-263 912.5 668 68.1
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 3.3e-263 911.8 685 67.0
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 1.6e-262 909.4 707 66.9
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 2.1e-262 909.1 615 72.4
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 4.8e-262 907.9 615 72.2
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 1.4e-261 906.4 615 72.0
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 5.3e-261 904.4 614 72.0
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 2.6e-260 902.1 614 71.8
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 4.2e-258 894.8 687 67.5
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 3.7e-254 881.7 637 68.9
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 3.1e-253 878.6 672 65.9
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 3.4e-252 875.2 672 64.7
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 7.7e-252 874.0 627 69.2
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 1.4e-248 863.2 666 67.0
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 1.1e-242 843.6 693 63.5
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 4.2e-242 841.6 616 67.5
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 1.4e-240 836.6 558 74.6
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 1.5e-239 833.2 802 57.9
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 5.7e-239 831.2 563 73.5
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 3.5e-236 822.0 669 64.0
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 7.2e-234 814.3 561 73.8
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.7e-233 812.4 611 65.8
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 3.3e-231 805.4 556 71.0
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 3.8e-227 792.0 811 53.1
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 1.1e-221 773.9 682 61.6
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 3.4e-215 752.3 580 67.2
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 7.2e-210 734.6 473 76.1
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 6.6e-203 711.4 616 58.4
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 2.1e-188 663.3 787 48.0
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 9.3e-165 584.7 418 70.3
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 2.2e-150 537.0 375 70.9
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.5e-146 523.5 324 82.7
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.5e-146 523.5 324 82.7
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.2e-143 514.6 422 60.0
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 8.5e-126 455.3 524 48.9
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 5.0e-118 429.5 349 62.5
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 3.7e-113 413.3 549 44.8
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 6.3e-105 386.0 271 72.0
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 5.0e-94 349.7 271 65.7
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 4.3e-93 346.7 265 70.6
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 2.6e-82 310.8 556 36.9
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.6e-79 301.6 229 63.3
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.2e-66 258.8 144 93.1
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 1.6e-60 238.4 550 31.1
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.1e-56 225.7 206 56.3
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 5.3e-51 206.8 271 43.9
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 4.8e-44 183.7 181 54.7
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 7.4e-29 133.3 142 52.1
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 1.8e-27 128.6 124 54.0
RcHm_v2.0_Chr1g0380361 Rosa chinensis HOM05D006589 ORTHO05D008350 7.9e-23 113.2 76 88.2
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 1.4e-11 75.9 110 40.9
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 1.2e-07 62.8 97 36.1


User provided reference genes

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