Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g10630 Fragaria vesca HOM05D004582 ORTHO05D005507 2.2e-66 255.4 119 100.0
FAN07G0418 Fragaria x ananassa HOM05D004582 ORTHO05D005507 2.2e-66 255.4 119 100.0
FAN12G0218 Fragaria x ananassa HOM05D004582 ORTHO05D005507 2.2e-66 255.4 119 100.0
FAN12G1626 Fragaria x ananassa HOM05D004582 ORTHO05D005507 2.2e-66 255.4 119 100.0
FAN17G0627 Fragaria x ananassa HOM05D004582 ORTHO05D005507 2.2e-66 255.4 119 100.0
RcHm_v2.0_Chr4g0406241 Rosa chinensis HOM05D004582 ORTHO05D005507 9.2e-65 250.0 119 98.3
FAN22G0072 Fragaria x ananassa HOM05D004582 ORTHO05D005507 1.2e-61 239.6 119 95.8
TWI15G0512 Tripterygium wilfordii HOM05D004582 ORTHO05D005507 5.1e-55 217.6 119 84.9
Sed0002882 Sechium edule HOM05D004582 ORTHO05D005507 1.9e-54 215.7 116 85.3
Manes.01G004880 Manihot esculenta HOM05D004582 ORTHO05D005507 4.3e-54 214.5 113 85.8
MELO3C023752.2 Cucumis melo HOM05D004582 ORTHO05D005507 9.6e-54 213.4 116 84.5
CsaV3_3G020290 Cucumis sativus L. HOM05D004582 ORTHO05D005507 9.6e-54 213.4 116 84.5
vmacro00989 Vaccinium macrocarpon HOM05D004582 ORTHO05D005507 1.6e-53 212.6 119 83.2
Ciclev10017231m.g Citrus clementina HOM05D004582 ORTHO05D005507 2.1e-53 212.2 111 86.5
CANSAT78G1495 Cannabis sativa HOM05D004582 ORTHO05D005507 2.8e-53 211.8 113 85.0
Prupe.3G015100 Prunus persica HOM05D004582 ORTHO05D005507 2.8e-53 211.8 115 80.9
Actinidia04370 Actinidia chinensis HOM05D004582 ORTHO05D005507 3.6e-53 211.5 117 82.9
Eucgr.G02614 Eucalyptus grandis HOM05D004582 ORTHO05D005507 3.6e-53 211.5 119 81.5
Sed0027851 Sechium edule HOM05D004582 ORTHO05D005507 4.8e-53 211.1 116 83.6
CSS0028000 Camellia sinensis var. sinensis HOM05D004582 ORTHO05D005507 6.2e-53 210.7 115 84.3
MD04G1047800 Malus domestica HOM05D004582 ORTHO05D005507 1.1e-52 209.9 116 82.8
MD09G1278200 Malus domestica HOM05D004582 ORTHO05D005507 1.1e-52 209.9 115 78.3
Gohir.A04G109900 Gossypium hirsutum HOM05D004582 ORTHO05D005507 1.4e-52 209.5 113 84.1
Gohir.D04G150100 Gossypium hirsutum HOM05D004582 ORTHO05D005507 1.4e-52 209.5 113 84.1
Gorai.012G136700 Gossypium raimondii HOM05D004582 ORTHO05D005507 1.4e-52 209.5 113 84.1
Duzib248G0155 Durio zibethinus HOM05D004582 ORTHO05D005507 1.8e-52 209.1 113 84.1
ECA246G1034 Erigeron canadensis HOM05D004582 ORTHO05D005507 2.4e-52 208.8 112 84.8
PGR142G2001 Punica granatum HOM05D004582 ORTHO05D005507 4.0e-52 208.0 119 79.8
THA.LOC104819361 Tarenaya hassleriana HOM05D004582 ORTHO05D005507 4.0e-52 208.0 113 81.4
Potri.010G255000 Populus trichocarpa HOM05D004582 ORTHO05D005507 5.3e-52 207.6 119 82.4
GSVIVG01034346001 Vitis vinifera HOM05D004582 ORTHO05D005507 6.9e-52 207.2 110 84.5
Cfa005243 Carpinus fangiana HOM05D004582 ORTHO05D005507 9.0e-52 206.8 113 82.3
Solyc04g008750.3 Solanum lycopersicum HOM05D004582 ORTHO05D005507 9.0e-52 206.8 115 79.1
Sopen04g003930 Solanum pennellii HOM05D004582 ORTHO05D005507 9.0e-52 206.8 115 79.1
PGSC0003DMG400025297 Solanum tuberosum HOM05D004582 ORTHO05D005507 1.2e-51 206.5 115 79.1
Atru.chr11.27 Acer truncatum HOM05D004582 ORTHO05D005507 1.5e-51 206.1 111 83.8
HanXRQChr15g0475831 Helianthus annuus HOM05D004582 ORTHO05D005507 2.0e-51 205.7 112 83.9
MD17G1271200 Malus domestica HOM05D004582 ORTHO05D005507 2.6e-51 205.3 114 78.1
Thecc.02G151700 Theobroma cacao HOM05D004582 ORTHO05D005507 2.6e-51 205.3 113 83.2
VMungo0251G1823 Vigna mungo HOM05D000329 ORTHO05D002813 2.6e-51 205.3 119 79.8
CiPaw.06G093300 Carya illinoinensis HOM05D004582 ORTHO05D005507 3.4e-51 204.9 119 80.7
Hma1.2p1_2673F.1_g326700 Hydrangea macrophylla HOM05D004582 ORTHO05D005507 3.4e-51 204.9 112 83.9
Glyma.07G274100 Glycine max HOM05D004582 ORTHO05D005507 4.4e-51 204.5 116 80.2
Potri.008G002400 Populus trichocarpa HOM05D004582 ORTHO05D005507 4.4e-51 204.5 119 81.5
Migut.N02765 Erythranthe guttata HOM05D004582 ORTHO05D005507 7.6e-51 203.8 115 80.9
Peaxi162Scf00329g00317 Petunia axillaris HOM05D004582 ORTHO05D005507 9.9e-51 203.4 112 79.5
THA.LOC104800345 Tarenaya hassleriana HOM05D004582 ORTHO05D005507 9.9e-51 203.4 113 79.6
BcaB07g29700 Brassica carinata HOM05D004582 ORTHO05D005507 1.7e-50 202.6 113 78.8
BcaC03g18219 Brassica carinata HOM05D004582 ORTHO05D005507 2.2e-50 202.2 113 77.9
A02p42940 Brassica napus HOM05D004582 ORTHO05D005507 2.2e-50 202.2 113 77.9
C02p62880 Brassica napus HOM05D004582 ORTHO05D005507 2.2e-50 202.2 113 77.9
BraA02t09217Z Brassica rapa HOM05D004582 ORTHO05D005507 2.2e-50 202.2 113 77.9
Glyma.17G000400 Glycine max HOM05D004582 ORTHO05D005507 2.2e-50 202.2 116 79.3
Aa31LG3G17960 Aethionema arabicum HOM05D004582 ORTHO05D005507 3.8e-50 201.4 113 77.9
CAN.G419.18 Capsicum annuum HOM05D004582 ORTHO05D005507 3.8e-50 201.4 112 79.5
Phvul.003G004200 Phaseolus vulgaris HOM05D004582 ORTHO05D005507 3.8e-50 201.4 116 79.3
Sp2g26760 Schrenkiella parvula HOM05D004582 ORTHO05D005507 4.9e-50 201.1 113 77.9
Aa31LG10G11080 Aethionema arabicum HOM05D004582 ORTHO05D005507 6.4e-50 200.7 113 77.0
Aa31LG1G18160 Aethionema arabicum HOM05D004582 ORTHO05D005507 6.4e-50 200.7 113 77.0
Cc11_g00370 Coffea canephora HOM05D004582 ORTHO05D005507 6.4e-50 200.7 116 80.2
Carub.0006s0753 Capsella rubella HOM05D004582 ORTHO05D005507 8.4e-50 200.3 113 77.0
Phvul.001G068300 Phaseolus vulgaris HOM05D004582 ORTHO05D005507 8.4e-50 200.3 116 79.3
Thhalv10005155m.g Eutrema salsugineum HOM05D004582 ORTHO05D005507 1.1e-49 199.9 113 77.0
Lalb_Chr10g0094681 Lupinus albus HOM05D004582 ORTHO05D005507 1.1e-49 199.9 116 79.3
SGA_v2.0_scaffold231G43443 Striga asiatica HOM05D004582 ORTHO05D005507 1.4e-49 199.5 115 77.4
Ca_16312_v3 Cicer arietinum L. HOM05D004582 ORTHO05D005507 1.9e-49 199.1 116 76.7
Lsat_1_v5_gn_1_108541 Lactuca sativa HOM05D004582 ORTHO05D005507 1.9e-49 199.1 112 81.2
TAR629G2421 Trochodendron aralioides HOM05D004582 ORTHO05D005507 1.9e-49 199.1 112 80.4
CARHR278210 Cardamine hirsuta HOM05D004582 ORTHO05D005507 3.2e-49 198.4 115 75.7
Gohir.D13G059000 Gossypium hirsutum HOM05D004582 ORTHO05D005507 3.2e-49 198.4 113 79.6
Nitab4.5_0000129g0010 Nicotiana tabacum HOM05D004582 ORTHO05D005507 3.2e-49 198.4 114 78.1
Hund08683 Selenicereus undatus HOM05D004582 ORTHO05D005507 3.2e-49 198.4 112 80.4
Carub.0008s2444 Capsella rubella HOM05D004582 ORTHO05D005507 4.2e-49 198.0 113 77.0
AL6G19290 Arabidopsis lyrata HOM05D004582 ORTHO05D005507 5.4e-49 197.6 113 76.1
Gohir.A13G062900 Gossypium hirsutum HOM05D004582 ORTHO05D005507 5.4e-49 197.6 113 78.8
AL8G40820 Arabidopsis lyrata HOM05D004582 ORTHO05D005507 7.1e-49 197.2 113 77.0
AT5G63670 Arabidopsis thaliana HOM05D004582 ORTHO05D005507 7.1e-49 197.2 113 77.0
SalBow6G5789 Salvia bowleyana HOM05D004582 ORTHO05D005507 7.1e-49 197.2 112 78.6
SalBow8G4318 Salvia bowleyana HOM05D004582 ORTHO05D005507 7.1e-49 197.2 112 78.6
MSTRG.25043 Avicennia marina HOM05D004582 ORTHO05D005507 9.3e-49 196.8 115 77.4
BcaB01g05655 Brassica carinata HOM05D004582 ORTHO05D005507 1.6e-48 196.1 119 70.6
A03p03980 Brassica napus HOM05D004582 ORTHO05D005507 1.6e-48 196.1 119 70.6
C03p04450 Brassica napus HOM05D004582 ORTHO05D005507 1.6e-48 196.1 119 70.6
TPR.G31176 Trifolium pratense HOM05D004582 ORTHO05D005507 1.6e-48 196.1 114 76.3
BcaB01g05582 Brassica carinata HOM05D004582 ORTHO05D005507 2.1e-48 195.7 119 70.6
Lj6g0014483 Lotus japonicus HOM05D004582 ORTHO05D005507 2.1e-48 195.7 112 76.8
HPP92_027251 Vanilla planifolia HOM05D004582 ORTHO05D005507 2.1e-48 195.7 112 79.5
AT5G08565 Arabidopsis thaliana HOM05D004582 ORTHO05D005507 2.7e-48 195.3 113 75.2
Sp6g34300 Schrenkiella parvula HOM05D004582 ORTHO05D005507 4.6e-48 194.5 113 73.5
Aqoxy5G02794 Aquilegia oxysepala HOM05D004582 ORTHO05D005507 7.9e-48 193.7 111 77.5
ATR0693G307 Amborella trichopoda HOM05D004582 ORTHO05D005507 1.0e-47 193.4 115 74.8
MSTRG.1036 Avicennia marina HOM05D004582 ORTHO05D005507 1.0e-47 193.4 112 76.8
Sc06g0007770 Simmondsia chinensis HOM05D004582 ORTHO05D005507 1.0e-47 193.4 112 78.6
Nn8g39808 Nelumbo nucifera HOM05D004582 ORTHO05D005507 1.3e-47 193.0 118 77.1
unitig_749.g13837 Utricularia gibba HOM05D004582 ORTHO05D005507 1.7e-47 192.6 112 73.2
Aqoxy3G01747 Aquilegia oxysepala HOM05D004582 ORTHO05D005507 2.3e-47 192.2 112 75.9
HanXRQChr01g0026901 Helianthus annuus HOM05D004582 ORTHO05D005507 6.6e-47 190.7 119 69.7
MBI11_g25051_MAGBIO Magnolia biondii HOM05D004582 ORTHO05D005507 6.6e-47 190.7 115 75.7
Medtr3g092730 Medicago truncatula HOM05D004582 ORTHO05D005507 1.1e-46 189.9 114 75.4
Medtr3g092770 Medicago truncatula HOM05D004582 ORTHO05D005507 1.1e-46 189.9 114 75.4
HanXRQChr01g0026751 Helianthus annuus HOM05D004582 ORTHO05D005507 1.5e-46 189.5 112 73.2
Psat5g071960 Pisum sativum HOM05D004582 ORTHO05D005507 1.9e-46 189.1 111 76.6
Hma1.2p1_1901F.1_g307030 Hydrangea macrophylla HOM05D004582 ORTHO05D005507 3.3e-46 188.3 103 83.5
SEGI_05202 Sequoiadendron giganteum HOM05D004582 ORTHO05D005507 7.3e-46 187.2 110 73.6
PSO541G0162 Papaver somniferum HOM05D004582 ORTHO05D005507 9.6e-46 186.8 110 75.5
PSO675G8561 Papaver somniferum HOM05D004582 ORTHO05D005507 9.6e-46 186.8 110 75.5
Os07g0623400 Oryza sativa ssp. japonica HOM05D004582 ORTHO05D005507 3.6e-45 184.9 119 69.7
Gorai.013G066800 Gossypium raimondii HOM05D004582 ORTHO05D005507 4.8e-45 184.5 149 61.1
COL.COLO4_33156 Corchorus olitorius HOM05D004582 ORTHO05D005507 8.1e-45 183.7 98 84.7
PSO339G5842 Papaver somniferum HOM05D004582 ORTHO05D005507 8.1e-45 183.7 110 72.7
ClCG05G012130 Citrullus lanatus HOM05D004582 ORTHO05D005507 3.1e-44 181.8 99 84.8
Atru.chr6.1863 Acer truncatum HOM05D004582 ORTHO05D005507 1.5e-43 179.5 96 85.4
Duzib132G0727 Durio zibethinus HOM05D004582 ORTHO05D005507 2.0e-43 179.1 96 84.4
Cfa008860 Carpinus fangiana HOM05D002331 ORTHO05D002624 5.8e-43 177.6 176 51.7
AUR62032890 Chenopodium quinoa HOM05D004582 ORTHO05D005507 7.6e-43 177.2 110 75.5
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 1.3e-42 176.4 102 80.4
Atru.chr11.31 Acer truncatum HOM05D004582 ORTHO05D005507 1.7e-42 176.0 96 83.3
SalBow6G4393 Salvia bowleyana HOM05D004582 ORTHO05D005507 4.2e-41 171.4 116 67.2
SalBow8G4232 Salvia bowleyana HOM05D004582 ORTHO05D005507 4.2e-41 171.4 116 67.2
DCAR_026806 Daucus carota HOM05D004582 ORTHO05D005507 7.1e-41 170.6 95 80.0
BolC2t12361H Brassica oleracea HOM05D004582 ORTHO05D005507 1.6e-40 169.5 124 64.5
SGA_v2.0_scaffold417G51254 Striga asiatica HOM05D004582 ORTHO05D005507 1.6e-40 169.5 98 77.6
AagrBONN_evm.TU.Sc2ySwM_344.5487 Anthoceros agrestis HOM05D004582 ORTHO05D005507 2.7e-40 168.7 107 68.2
Pp3c6_2640 Physcomitrium patens HOM05D004582 ORTHO05D005507 4.6e-40 167.9 110 66.4
SMO358G0649 Selaginella moellendorffii HOM05D004582 ORTHO05D005507 1.1e-38 163.3 108 66.7
SGA_v2.0_scaffold14G06942 Striga asiatica HOM05D004582 ORTHO05D005507 1.5e-38 162.9 143 55.9
Mapoly0092s0011 Marchantia polymorpha HOM05D004582 ORTHO05D005507 9.6e-38 160.2 107 65.4
Mapoly0166s0006 Marchantia polymorpha HOM05D004582 ORTHO05D005507 6.2e-37 157.5 107 65.4
Dinv17660 Davidia involucrata HOM05D004582 ORTHO05D005507 4.0e-36 154.8 84 82.1
CARHR204400 Cardamine hirsuta HOM05D004582 ORTHO05D005507 7.6e-35 150.6 97 68.0
Ah.11g040470 Amaranthus hybridus HOM05D004582 ORTHO05D005507 1.3e-34 149.8 150 51.3
QL03p073673 Quercus lobata HOM05D004582 ORTHO05D005507 2.7e-32 142.1 75 84.0
Oeu002508.1 Olea europaea HOM05D004582 ORTHO05D005507 5.1e-31 137.9 79 75.9
CiPaw.05G123600 Carya illinoinensis HOM05D004582 ORTHO05D005507 2.5e-30 135.6 81 79.0
Oeu039967.1 Olea europaea HOM05D004582 ORTHO05D005507 4.3e-30 134.8 79 74.7
Thhalv10015347m.g Eutrema salsugineum HOM05D004582 ORTHO05D005507 1.3e-29 133.3 75 76.0
ATR0772G012 Amborella trichopoda HOM05D004582 ORTHO05D005507 2.8e-29 132.1 74 78.4
EL10Ac9g23021 Beta vulgaris HOM05D004582 ORTHO05D005507 4.8e-29 131.3 74 78.4
CBR_g44398 Chara braunii HOM05D004582 ORTHO05D005507 4.8e-29 131.3 92 62.0
SEGI_39424 Sequoiadendron giganteum HOM05D004582 ORTHO05D005507 5.3e-28 127.9 81 69.1
MCO11G500 Micromonas commoda HOM05D004582 ORTHO05D005507 1.5e-27 126.3 107 50.5
Sabra10G0198500 Salix brachista HOM05D004582 ORTHO05D005507 3.2e-25 118.6 106 65.1
PRCOL_00005197 Prasinoderma coloniale HOM05D004582 ORTHO05D005507 4.2e-25 118.2 107 48.6
Sc06g0007290 Simmondsia chinensis HOM05D004582 ORTHO05D005507 4.8e-21 104.8 95 58.9
Nitab4.5_0008730g0050 Nicotiana tabacum HOM05D004582 ORTHO05D005507 1.7e-18 96.3 76 63.2
Cre02.g116300 Chlamydomonas reinhardtii HOM05D004582 ORTHO05D005507 1.9e-17 92.8 94 42.6
MD07G1114100 Malus domestica HOM05D004582 ORTHO05D005507 3.2e-17 92.0 58 67.2
Lj5g0002326 Lotus japonicus HOM05D004582 ORTHO05D005507 7.2e-17 90.9 93 49.5
Lj5g0003678 Lotus japonicus HOM05D004582 ORTHO05D005507 7.2e-17 90.9 93 49.5
Lj5g0005298 Lotus japonicus HOM05D004582 ORTHO05D005507 7.2e-17 90.9 93 49.5
Nitab4.5_0000129g0060 Nicotiana tabacum HOM05D004582 ORTHO05D005507 7.2e-17 90.9 76 60.5
Rhsim12G0090000 Rhododendron simsii HOM05D004582 ORTHO05D005507 1.2e-16 90.1 156 40.4
Haze_26483 Corylus avellana HOM05D004582 ORTHO05D005507 5.1e-15 84.7 88 42.0
BcaB01g05656 Brassica carinata HOM05D000467 ORTHO05D000379 6.7e-15 84.3 56 69.6
Cpa.g.sc887.1 Carica papaya HOM05D004582 ORTHO05D005507 2.2e-13 79.3 37 97.3
Cfa023443 Carpinus fangiana HOM05D004582 ORTHO05D123741 1.1e-12 77.0 83 41.0
Haze_11883 Corylus avellana HOM05D004582 ORTHO05D005507 1.4e-12 76.6 75 57.3
Lsat_1_v5_gn_1_108420 Lactuca sativa HOM05D004582 ORTHO05D005507 2.4e-12 75.9 39 84.6
Nitab4.5_0011163g0030 Nicotiana tabacum HOM05D004582 ORTHO05D005507 1.0e-07 60.5 76 44.7


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