Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G4224 Fragaria x ananassa HOM05D017155 ORTHO05D022651 1.7e-88 329.3 168 100.0
FAN27G0029 Fragaria x ananassa HOM05D017155 ORTHO05D022651 4.6e-54 214.9 151 79.5
FAN14G5658 Fragaria x ananassa HOM05D001504 ORTHO05D001394 5.0e-40 168.3 127 74.8
FAN28G0054 Fragaria x ananassa HOM05D017155 ORTHO05D022651 2.4e-34 149.4 150 62.7
FvH4_2g22411 Fragaria vesca HOM05D017155 ORTHO05D022651 1.7e-32 143.3 96 83.3
FvH4_2g31320 Fragaria vesca HOM05D000876 ORTHO05D022651 1.7e-32 143.3 96 83.3
FvH4_7g08971 Fragaria vesca HOM05D017155 ORTHO05D022651 1.7e-32 143.3 96 83.3
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 1.5e-23 113.6 103 69.9
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.8e-19 99.4 108 58.3
FAN27G2340 Fragaria x ananassa HOM05D000032 ORTHO05D005217 1.6e-09 67.0 74 59.5
Aa31LG4G1800 Aethionema arabicum HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Aa31LG7G1010 Aethionema arabicum HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
AL1G28620 Arabidopsis lyrata HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
AL2G39680 Arabidopsis lyrata HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
AT1G16470 Arabidopsis thaliana HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
AT1G79210 Arabidopsis thaliana HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
MSTRG.13078 Avicennia marina HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
MSTRG.14567 Avicennia marina HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BcaB02g07205 Brassica carinata HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BcaB02g08674 Brassica carinata HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BcaB05g25179 Brassica carinata HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BcaC03g15875 Brassica carinata HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BcaC08g45369 Brassica carinata HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BcaC08g47486 Brassica carinata HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
A02p22670 Brassica napus HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
A07p27240 Brassica napus HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
A07p44330 Brassica napus HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
C02p36280 Brassica napus HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
C06p30010 Brassica napus HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
C06p53100 Brassica napus HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BolC2t09642H Brassica oleracea HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BolC6t38161H Brassica oleracea HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BolC6t40327H Brassica oleracea HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BraA02t07268Z Brassica rapa HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BraA07t30368Z Brassica rapa HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
BraA07t31941Z Brassica rapa HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Carub.0001s1621 Capsella rubella HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Carub.0002s2608 Capsella rubella HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
CAN.G1736.4 Capsicum annuum HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
CARHR016940 Cardamine hirsuta HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Ciclev10005774m.g Citrus clementina HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
ECA236G0294 Erigeron canadensis HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Thhalv10008648m.g Eutrema salsugineum HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Thhalv10018943m.g Eutrema salsugineum HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
FvH4_3g12361 Fragaria vesca HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 2.7e-09 66.2 35 94.3
FAN25G2819 Fragaria x ananassa HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
HanXRQChr09g0245891 Helianthus annuus HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Lsat_1_v5_gn_7_110320 Lactuca sativa HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
RcHm_v2.0_Chr5g0020171 Rosa chinensis HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Sp1g14620 Schrenkiella parvula HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Sp5g34260 Schrenkiella parvula HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Solyc07g055080.3 Solanum lycopersicum HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Sopen07g027130 Solanum pennellii HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
PGSC0003DMG400020441 Solanum tuberosum HOM05D000276 ORTHO05D003855 2.7e-09 66.2 35 94.3
Actinidia08881 Actinidia chinensis HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Ah.10g035160 Amaranthus hybridus HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Ah.16g105330 Amaranthus hybridus HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
arahy.Tifrunner.gnm1.ann1.A3R4VN Arachis hypogaea HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
arahy.Tifrunner.gnm1.ann1.J6931G Arachis hypogaea HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
arahy.Tifrunner.gnm1.ann1.N85E68 Arachis hypogaea HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
arahy.Tifrunner.gnm1.ann1.X4HZ2T Arachis hypogaea HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
EL10Ac9g22468 Beta vulgaris HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
CSS0029046 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
CSS0035611 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
CANSAT78G1531 Cannabis sativa HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
CAN.G782.3 Capsicum annuum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Cpa.g.sc81.7 Carica papaya HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Cfa000708 Carpinus fangiana HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
CiPaw.09G076900 Carya illinoinensis HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
CiPaw.10G064400 Carya illinoinensis HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
CDE04G0605 Ceratophyllum demersum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
CDE07G0648 Ceratophyllum demersum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
AUR62041213 Chenopodium quinoa HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
AUR62042882 Chenopodium quinoa HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Ca_22480_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Ca_30351_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
ClCG01G009520 Citrullus lanatus HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Cc04_g13010 Coffea canephora HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Cc07_g05020 Coffea canephora HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
COL.COLO4_30995 Corchorus olitorius HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
MELO3C021745.2 Cucumis melo HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
DCAR_013727 Daucus carota HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
DCAR_016836 Daucus carota HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Dinv19593 Davidia involucrata HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Dinv42484 Davidia involucrata HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Duzib235G1056 Durio zibethinus HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Migut.H01673 Erythranthe guttata HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Migut.M01532 Erythranthe guttata HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Glyma.01G105500 Glycine max HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Glyma.03G073300 Glycine max HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Glyma.08G167600 Glycine max HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Glyma.15G260000 Glycine max HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Gohir.A05G145700 Gossypium hirsutum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Gohir.A10G044600 Gossypium hirsutum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Gohir.D05G148100 Gossypium hirsutum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Gohir.D10G045800 Gossypium hirsutum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Gorai.009G152300 Gossypium raimondii HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Gorai.011G048700 Gossypium raimondii HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Lj1A1145T21 Lonicera japonica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Lj5A344G22 Lonicera japonica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Lj1g0005035 Lotus japonicus HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Lalb_Chr01g0015471 Lupinus albus HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Lalb_Chr25g0284731 Lupinus albus HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
MD05G1224600 Malus domestica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
MD05G1251300 Malus domestica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
MD10G1206300 Malus domestica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
MD10G1231800 Malus domestica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Manes.06G175300 Manihot esculenta HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Manes.14G010700 Manihot esculenta HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Medtr0167s0060 Medicago truncatula HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Nitab4.5_0000822g0090 Nicotiana tabacum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Nitab4.5_0001095g0050 Nicotiana tabacum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Nitab4.5_0009223g0010 Nicotiana tabacum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Nitab4.5_0009892g0010 Nicotiana tabacum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Oeu043725.1 Olea europaea HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Os02g0634900 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Os03g0387100 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Peaxi162Scf00241g00079 Petunia axillaris HOM05D000276 ORTHO05D003855 3.5e-09 65.9 54 66.7
Phvul.005G059300 Phaseolus vulgaris HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Psat1g013600 Pisum sativum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Prupe.4G112500 Prunus persica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Prupe.4G136000 Prunus persica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
PGR102G3129 Punica granatum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
QL04p081873 Quercus lobata HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Rhsim12G0175800 Rhododendron simsii HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
SalBow8G5180 Salvia bowleyana HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Sed0005548 Sechium edule HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 3.5e-09 65.9 33 100.0
Hund12476 Selenicereus undatus HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Hund26663 Selenicereus undatus HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Sc24g0002720 Simmondsia chinensis HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Solyc10g008010.4 Solanum lycopersicum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Sopen10g003880 Solanum pennellii HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
PGSC0003DMG400010543 Solanum tuberosum HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
SGA_v2.0_scaffold239G44025 Striga asiatica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
SGA_v2.0_scaffold31G12584 Striga asiatica HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
THA.LOC104808130 Tarenaya hassleriana HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
THA.LOC104812363 Tarenaya hassleriana HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Thecc.06G143200 Theobroma cacao HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
TWI38G2183 Tripterygium wilfordii HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
TWI63G1717 Tripterygium wilfordii HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
TAR624G0525 Trochodendron aralioides HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
unitig_578.g16332 Utricularia gibba HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
unitig_8.g4751 Utricularia gibba HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
vmacro16726 Vaccinium macrocarpon HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
VMungo0464G0273 Vigna mungo HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
GSVIVG01012066001 Vitis vinifera HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Zm00001eb185510 Zea mays HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Zm00001eb185540 Zea mays HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Zm00001eb248210 Zea mays HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Zm00001eb248220 Zea mays HOM05D000276 ORTHO05D003855 3.5e-09 65.9 33 100.0
Potri.012G123100 Populus trichocarpa HOM05D000276 ORTHO05D017704 7.8e-09 64.7 33 97.0
Potri.012G123550 Populus trichocarpa HOM05D000276 ORTHO05D003855 7.8e-09 64.7 33 97.0
Potri.015G122400 Populus trichocarpa HOM05D000276 ORTHO05D003855 7.8e-09 64.7 33 97.0
Sabra15G0138500 Salix brachista HOM05D000276 ORTHO05D003855 7.8e-09 64.7 33 97.0
CSS0017767 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 1.3e-08 63.9 33 97.0
Ah.11g040490 Amaranthus hybridus HOM05D000276 ORTHO05D003855 1.7e-08 63.5 33 97.0
ATR0618G083 Amborella trichopoda HOM05D000276 ORTHO05D003855 1.7e-08 63.5 33 97.0
Hma1.2p1_1208F.1_g267120 Hydrangea macrophylla HOM05D000276 ORTHO05D003855 1.7e-08 63.5 33 97.0
MBI06_g27515_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D003855 1.7e-08 63.5 33 97.0
SEGI_33496 Sequoiadendron giganteum HOM05D000276 ORTHO05D003855 1.7e-08 63.5 33 97.0
HPP92_021539 Vanilla planifolia HOM05D000276 ORTHO05D003855 1.7e-08 63.5 33 97.0
Sabra12G0093400 Salix brachista HOM05D000009 ORTHO05D000008 2.3e-08 63.2 39 82.1
Ca_03602_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 5.0e-08 62.0 35 88.6
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 6.6e-08 61.6 62 58.1
Aqoxy2G04019 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 8.6e-08 61.2 33 93.9
Aqoxy3G04299 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 8.6e-08 61.2 33 93.9
Nn4g24843 Nelumbo nucifera HOM05D000276 ORTHO05D003855 8.6e-08 61.2 33 93.9
PSO017G4929 Papaver somniferum HOM05D000276 ORTHO05D003855 8.6e-08 61.2 33 93.9
PSO063G5488 Papaver somniferum HOM05D000276 ORTHO05D003855 8.6e-08 61.2 33 93.9
PSO478G2087 Papaver somniferum HOM05D000276 ORTHO05D003855 8.6e-08 61.2 33 93.9
PSO782G0714 Papaver somniferum HOM05D000276 ORTHO05D003855 8.6e-08 61.2 33 93.9
Eucgr.F04120 Eucalyptus grandis HOM05D000276 ORTHO05D003855 1.5e-07 60.5 105 47.6
Pp3c11_10390 Physcomitrium patens HOM05D000276 ORTHO05D003855 1.5e-07 60.5 35 85.7
Pp3c7_18410 Physcomitrium patens HOM05D000276 ORTHO05D003855 1.5e-07 60.5 35 85.7
Mapoly0004s0033 Marchantia polymorpha HOM05D000276 ORTHO05D003855 1.9e-07 60.1 33 90.9
Sabra12G0084400 Salix brachista HOM05D000276 ORTHO05D003855 5.6e-07 58.5 33 87.9
SMO203G0023 Selaginella moellendorffii HOM05D000276 ORTHO05D003855 5.6e-07 58.5 32 87.5
Aqoxy2G01703 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 7.3e-07 58.2 33 90.9
AagrBONN_evm.TU.Sc2ySwM_117.328 Anthoceros agrestis HOM05D000276 ORTHO05D003855 1.2e-06 57.4 33 84.8
CBR_g50356 Chara braunii HOM05D000276 ORTHO05D003855 1.6e-06 57.0 35 80.0
Sabra12G0086500 Salix brachista HOM05D000009 ORTHO05D000008 4.7e-06 55.5 100 45.0
FAN25G2607 Fragaria x ananassa HOM05D001042 ORTHO05D002657 8.0e-06 54.7 32 81.2


User provided reference genes

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