Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G1066 Fragaria x ananassa HOM05D004422 ORTHO05D007331 5.4e-60 234.2 122 100.0
FAN10G4150 Fragaria x ananassa HOM05D004422 ORTHO05D007331 5.4e-60 234.2 122 100.0
FAN01G0685 Fragaria x ananassa HOM05D004422 ORTHO05D007331 1.3e-58 229.6 119 100.0
FAN06G3830 Fragaria x ananassa HOM05D004422 ORTHO05D007331 1.3e-58 229.6 119 100.0
FAN03G1687 Fragaria x ananassa HOM05D004422 ORTHO05D007331 6.6e-58 227.3 119 99.2
FAN10G2373 Fragaria x ananassa HOM05D004422 ORTHO05D007331 8.6e-58 226.9 119 98.3
RcHm_v2.0_Chr1g0348021 Rosa chinensis HOM05D004422 ORTHO05D007331 4.1e-44 181.4 127 81.9
GSVIVG01018288001 Vitis vinifera HOM05D004422 ORTHO05D007331 7.6e-38 160.6 127 70.9
CSS0020521 Camellia sinensis var. sinensis HOM05D004422 ORTHO05D007331 4.1e-36 154.8 122 71.3
Actinidia32507 Actinidia chinensis HOM05D004422 ORTHO05D007331 1.2e-35 153.3 121 72.7
Haze_02852 Corylus avellana HOM05D004422 ORTHO05D007331 2.7e-35 152.1 127 71.7
MD07G1109400 Malus domestica HOM05D004422 ORTHO05D007331 6.0e-35 151.0 130 70.8
Manes.05G055300 Manihot esculenta HOM05D004422 ORTHO05D007331 3.9e-34 148.3 125 73.6
vmacro13500 Vaccinium macrocarpon HOM05D004422 ORTHO05D007331 6.6e-34 147.5 124 70.2
Cfa011065 Carpinus fangiana HOM05D004422 ORTHO05D007331 1.1e-33 146.7 127 67.7
Potri.014G049200 Populus trichocarpa HOM05D004422 ORTHO05D007331 1.1e-33 146.7 134 65.7
Eucgr.H04784 Eucalyptus grandis HOM05D004422 ORTHO05D007331 2.5e-33 145.6 128 67.2
Sabra14G0035000 Salix brachista HOM05D004422 ORTHO05D007331 4.3e-33 144.8 130 66.9
CANSAT25G3675 Cannabis sativa HOM05D004422 ORTHO05D007331 2.1e-32 142.5 131 66.4
CiPaw.14G020100 Carya illinoinensis HOM05D004422 ORTHO05D007331 2.8e-32 142.1 126 65.9
TWI59G1250 Tripterygium wilfordii HOM05D004422 ORTHO05D007331 3.6e-32 141.7 126 70.6
COL.COLO4_07156 Corchorus olitorius HOM05D004422 ORTHO05D007331 6.2e-32 141.0 128 65.6
Thecc.01G395500 Theobroma cacao HOM05D004422 ORTHO05D007331 6.2e-32 141.0 128 64.8
Lj7C547G5 Lonicera japonica HOM05D004422 ORTHO05D007331 8.1e-32 140.6 119 66.4
Rhsim07G0036300 Rhododendron simsii HOM05D004422 ORTHO05D007331 8.1e-32 140.6 126 61.9
Cpa.g.sc22.52 Carica papaya HOM05D004422 ORTHO05D007331 1.1e-31 140.2 127 67.7
Dinv44059 Davidia involucrata HOM05D004422 ORTHO05D007331 1.4e-31 139.8 124 67.7
Ciclev10018701m.g Citrus clementina HOM05D004422 ORTHO05D007331 8.9e-31 137.1 126 65.9
Dinv43612 Davidia involucrata HOM05D004422 ORTHO05D007331 8.9e-31 137.1 127 62.2
COL.COLO4_30046 Corchorus olitorius HOM05D004422 ORTHO05D007331 1.5e-30 136.3 130 65.4
Nn1g00835 Nelumbo nucifera HOM05D004422 ORTHO05D007331 1.5e-30 136.3 128 64.8
Duzib268G0035 Durio zibethinus HOM05D004422 ORTHO05D007331 2.0e-30 136.0 132 62.9
ClCG06G002430 Citrullus lanatus HOM05D004422 ORTHO05D007331 5.8e-30 134.4 125 64.8
Peaxi162Scf00475g00041 Petunia axillaris HOM05D004422 ORTHO05D007331 7.6e-30 134.0 122 61.5
Nitab4.5_0000920g0050 Nicotiana tabacum HOM05D004422 ORTHO05D007331 9.9e-30 133.7 122 63.1
CsaV3_6G008710 Cucumis sativus L. HOM05D004422 ORTHO05D007331 1.7e-29 132.9 125 63.2
QL10p000960 Quercus lobata HOM05D004422 ORTHO05D007331 1.7e-29 132.9 124 63.7
MELO3C022290.2 Cucumis melo HOM05D004422 ORTHO05D007331 2.2e-29 132.5 125 62.4
Sp5g30300 Schrenkiella parvula HOM05D004422 ORTHO05D007331 2.2e-29 132.5 121 64.5
CAN.G1497.17 Capsicum annuum HOM05D004422 ORTHO05D007331 2.9e-29 132.1 123 64.2
Glyma.03G110500 Glycine max HOM05D004422 ORTHO05D007331 3.8e-29 131.7 135 59.3
CANSAT25G3884 Cannabis sativa HOM05D004422 ORTHO05D007331 6.4e-29 131.0 128 64.1
Sed0020409 Sechium edule HOM05D004422 ORTHO05D007331 1.1e-28 130.2 126 60.3
AT3G48110 Arabidopsis thaliana HOM05D004422 ORTHO05D007331 2.4e-28 129.0 122 63.1
Nitab4.5_0002685g0030 Nicotiana tabacum HOM05D004422 ORTHO05D007331 4.2e-28 128.3 123 61.0
THA.LOC104816999 Tarenaya hassleriana HOM05D004422 ORTHO05D007331 5.4e-28 127.9 129 63.6
VMungo0331G1046 Vigna mungo HOM05D004422 ORTHO05D007331 7.1e-28 127.5 131 59.5
arahy.Tifrunner.gnm1.ann1.Q83G00 Arachis hypogaea HOM05D004422 ORTHO05D007331 9.3e-28 127.1 128 62.5
Lj3g0007750 Lotus japonicus HOM05D004422 ORTHO05D007331 9.3e-28 127.1 125 62.4
Sopen01g035990 Solanum pennellii HOM05D004422 ORTHO05D007331 1.2e-27 126.7 120 63.3
Carub.0005s1421 Capsella rubella HOM05D004422 ORTHO05D007331 2.1e-27 125.9 120 63.3
BcaB02g07011 Brassica carinata HOM05D004422 ORTHO05D007331 3.5e-27 125.2 122 61.5
AUR62025581 Chenopodium quinoa HOM05D004422 ORTHO05D007331 4.6e-27 124.8 123 61.0
HanXRQChr16g0521111 Helianthus annuus HOM05D004422 ORTHO05D007331 7.8e-27 124.0 130 60.8
PSO782G5506 Papaver somniferum HOM05D004422 ORTHO05D007331 7.8e-27 124.0 131 57.3
Hund18610 Selenicereus undatus HOM05D004422 ORTHO05D007331 7.8e-27 124.0 126 57.9
EL10Ac7g18223 Beta vulgaris HOM05D004422 ORTHO05D007331 1.3e-26 123.2 123 60.2
Migut.B01531 Erythranthe guttata HOM05D004422 ORTHO05D007331 1.3e-26 123.2 129 58.9
Thhalv10018047m.g Eutrema salsugineum HOM05D004422 ORTHO05D007331 1.3e-26 123.2 120 60.0
SGA_v2.0_scaffold340G49325 Striga asiatica HOM05D004422 ORTHO05D007331 1.3e-26 123.2 123 60.2
AL5G27440 Arabidopsis lyrata HOM05D004422 ORTHO05D007331 3.0e-26 122.1 119 62.2
Aa31LG1G11470 Aethionema arabicum HOM05D004422 ORTHO05D007331 5.1e-26 121.3 122 62.3
Solyc01g090200.4 Solanum lycopersicum HOM05D004422 ORTHO05D007331 5.1e-26 121.3 119 58.0
CDE09G1306 Ceratophyllum demersum HOM05D004422 ORTHO05D007331 8.7e-26 120.6 128 57.8
SalBow5G1783 Salvia bowleyana HOM05D004422 ORTHO05D007331 8.7e-26 120.6 132 56.1
unitig_0.g1355 Utricularia gibba HOM05D004422 ORTHO05D007331 1.1e-25 120.2 134 56.7
C06p32790 Brassica napus HOM05D004422 ORTHO05D007331 1.9e-25 119.4 123 61.8
BolC6t38401H Brassica oleracea HOM05D004422 ORTHO05D007331 1.9e-25 119.4 123 61.8
Aqoxy5G04133 Aquilegia oxysepala HOM05D004422 ORTHO05D007331 2.5e-25 119.0 129 58.1
ECA234G0959 Erigeron canadensis HOM05D004422 ORTHO05D007331 3.3e-25 118.6 121 57.9
Ah.15g094660 Amaranthus hybridus HOM05D004422 ORTHO05D007331 4.3e-25 118.2 129 55.0
MSTRG.20687 Avicennia marina HOM05D004422 ORTHO05D007331 5.6e-25 117.9 131 57.3
A07p29020 Brassica napus HOM05D004422 ORTHO05D007331 7.3e-25 117.5 124 62.1
TAR375G0830 Trochodendron aralioides HOM05D004422 ORTHO05D007331 9.6e-25 117.1 91 70.3
BraA07t30542Z Brassica rapa HOM05D004422 ORTHO05D007331 1.6e-24 116.3 124 62.1
QL04p030068 Quercus lobata HOM05D004422 ORTHO05D007331 1.6e-24 116.3 135 57.0
Gorai.004G038800 Gossypium raimondii HOM05D004422 ORTHO05D007331 2.8e-24 115.5 126 57.1
Zm00001eb379480 Zea mays HOM05D004422 ORTHO05D007331 2.8e-24 115.5 111 62.2
Gohir.A08G029300 Gossypium hirsutum HOM05D004422 ORTHO05D007331 3.6e-24 115.2 127 56.7
Cc02_g25150 Coffea canephora HOM05D004422 ORTHO05D007331 6.2e-24 114.4 145 51.0
Lsat_1_v5_gn_4_39461 Lactuca sativa HOM05D004422 ORTHO05D007331 8.1e-24 114.0 138 53.6
Gohir.D08G040000 Gossypium hirsutum HOM05D004422 ORTHO05D007331 1.1e-23 113.6 126 56.3
Lalb_Chr07g0195401 Lupinus albus HOM05D004422 ORTHO05D007331 1.1e-23 113.6 132 53.0
Os06g0103600 Oryza sativa ssp. japonica HOM05D004422 ORTHO05D007331 2.4e-23 112.5 81 66.7
Psat4g224760 Pisum sativum HOM05D004422 ORTHO05D007331 1.2e-22 110.2 57 87.7
TPR.G33119 Trifolium pratense HOM05D004422 ORTHO05D007331 2.0e-22 109.4 55 90.9
Medtr8g006955 Medicago truncatula HOM05D004422 ORTHO05D007331 3.4e-22 108.6 139 51.1
Ca_25801_v3 Cicer arietinum L. HOM05D004422 ORTHO05D007331 5.8e-22 107.8 122 55.7
Atru.chr5.121 Acer truncatum HOM05D004422 ORTHO05D007331 9.9e-22 107.1 129 51.9
SEGI_38441 Sequoiadendron giganteum HOM05D004422 ORTHO05D007331 1.7e-21 106.3 55 87.3
SGA_v2.0_scaffold52G19227 Striga asiatica HOM05D004422 ORTHO05D007331 1.7e-21 106.3 161 46.6
ATR0057G028 Amborella trichopoda HOM05D004422 ORTHO05D007331 2.2e-21 105.9 132 51.5
Actinidia18350 Actinidia chinensis HOM05D004422 ORTHO05D007331 2.9e-21 105.5 121 59.5
AagrBONN_evm.TU.Sc2ySwM_117.3818 Anthoceros agrestis HOM05D004422 ORTHO05D007331 1.1e-20 103.6 81 66.7
Mapoly0186s0003 Marchantia polymorpha HOM05D004422 ORTHO05D007331 3.5e-19 98.6 113 51.3
Pp3c1_42870 Physcomitrium patens HOM05D004422 ORTHO05D007331 3.9e-18 95.1 121 50.4
CBR_g19146 Chara braunii HOM05D004422 ORTHO05D007331 8.7e-18 94.0 96 54.2
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 2.1e-16 89.4 41 90.2
PRCOL_00000491 Prasinoderma coloniale HOM05D004422 ORTHO05D007331 1.8e-15 86.3 63 68.3
Cre10.g433000 Chlamydomonas reinhardtii HOM05D004422 ORTHO05D007331 2.4e-15 85.9 98 53.1
MCO03G257 Micromonas commoda HOM05D004422 ORTHO05D007331 1.2e-14 83.6 102 52.9
DCAR_029470 Daucus carota HOM05D004422 ORTHO05D007331 1.8e-10 69.7 30 100.0
HPP92_002531 Vanilla planifolia HOM05D004422 ORTHO05D007331 1.8e-10 69.7 30 100.0
Haze_27357 Corylus avellana HOM05D004422 ORTHO05D007331 1.1e-07 60.5 50 52.0
Sc12g0011040 Simmondsia chinensis HOM05D004422 ORTHO05D007331 7.6e-06 54.3 24 91.7


User provided reference genes

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