Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2726 Fragaria x ananassa HOM05D005362 ORTHO05D006895 6.9e-159 563.9 285 100.0
FAN10G2687 Fragaria x ananassa HOM05D005362 ORTHO05D006895 1.6e-107 393.3 202 99.0
FAN01G2784 Fragaria x ananassa HOM05D005362 ORTHO05D006895 7.3e-92 341.3 234 77.4
FAN08G0864 Fragaria x ananassa HOM05D005362 ORTHO05D006895 3.1e-74 282.7 158 89.2
FAN13G2767 Fragaria x ananassa HOM05D005362 ORTHO05D006895 6.9e-74 281.6 158 88.6
FvH4_5g29994 Fragaria vesca HOM05D005362 ORTHO05D006895 5.8e-73 278.5 158 88.6
RcHm_v2.0_Chr7g0224161 Rosa chinensis HOM05D005362 ORTHO05D006895 5.8e-73 278.5 158 88.0
FAN06G4934 Fragaria x ananassa HOM05D005362 ORTHO05D006895 8.4e-72 274.6 278 60.8
FAN18G1237 Fragaria x ananassa HOM05D005362 ORTHO05D006895 8.4e-72 274.6 158 88.0
FAN03G3293 Fragaria x ananassa HOM05D005362 ORTHO05D006895 7.1e-71 271.6 166 91.0
Prupe.5G207600 Prunus persica HOM05D005362 ORTHO05D006895 6.4e-64 248.4 160 78.1
FvH4_7g15160 Fragaria vesca HOM05D005362 ORTHO05D006895 9.3e-63 244.6 154 87.7
MD14G1214300 Malus domestica HOM05D005362 ORTHO05D006895 6.7e-61 238.4 166 74.1
TWI81G0474 Tripterygium wilfordii HOM05D005362 ORTHO05D006895 4.8e-59 232.3 167 72.5
Potri.017G133400 Populus trichocarpa HOM05D005362 ORTHO05D006895 6.2e-59 231.9 159 73.0
Sabra17G0110200 Salix brachista HOM05D005362 ORTHO05D006895 2.4e-58 229.9 159 73.0
CSS0010906 Camellia sinensis var. sinensis HOM05D005362 ORTHO05D006895 6.9e-58 228.4 159 71.7
CSS0049665 Camellia sinensis var. sinensis HOM05D005362 ORTHO05D006895 6.9e-58 228.4 159 71.7
Lj5P134T43 Lonicera japonica HOM05D005362 ORTHO05D006895 1.2e-57 227.6 159 71.7
TWI15G0078 Tripterygium wilfordii HOM05D005362 ORTHO05D006895 1.2e-57 227.6 168 69.6
TAR371G1139 Trochodendron aralioides HOM05D005362 ORTHO05D006895 1.2e-57 227.6 169 66.9
Duzib205G1468 Durio zibethinus HOM05D005362 ORTHO05D006895 1.5e-57 227.3 169 70.4
CiPaw.11G055600 Carya illinoinensis HOM05D005362 ORTHO05D006895 3.4e-57 226.1 160 73.1
Haze_22893 Corylus avellana HOM05D005362 ORTHO05D006895 7.6e-57 224.9 160 72.5
Gohir.D12G186500 Gossypium hirsutum HOM05D005362 ORTHO05D006895 7.6e-57 224.9 168 68.5
Actinidia35047 Actinidia chinensis HOM05D005362 ORTHO05D006895 9.9e-57 224.6 158 72.2
Gorai.008G199900 Gossypium raimondii HOM05D005362 ORTHO05D006895 1.7e-56 223.8 168 67.9
MBI06_g05054_MAGBIO Magnolia biondii HOM05D005362 ORTHO05D006895 2.9e-56 223.0 159 70.4
Dinv17441 Davidia involucrata HOM05D005362 ORTHO05D006895 3.8e-56 222.6 159 69.2
Cfa014169 Carpinus fangiana HOM05D005362 ORTHO05D006895 6.4e-56 221.9 160 71.2
Gohir.A12G183600 Gossypium hirsutum HOM05D005362 ORTHO05D006895 1.4e-55 220.7 168 67.3
Peaxi162Scf00201g00422 Petunia axillaris HOM05D005362 ORTHO05D006895 2.5e-55 219.9 157 71.3
Sc10g0009660 Simmondsia chinensis HOM05D005362 ORTHO05D006895 5.5e-55 218.8 159 68.6
MSTRG.11331 Avicennia marina HOM05D005362 ORTHO05D006895 7.1e-55 218.4 160 70.0
HanXRQChr05g0154331 Helianthus annuus HOM05D005362 ORTHO05D006895 7.1e-55 218.4 158 69.6
Thecc.03G104700 Theobroma cacao HOM05D005362 ORTHO05D006895 7.1e-55 218.4 159 69.8
Rhsim12G0149500 Rhododendron simsii HOM05D005362 ORTHO05D006895 9.3e-55 218.0 159 69.8
Rhsim12G0149700 Rhododendron simsii HOM05D005362 ORTHO05D006895 9.3e-55 218.0 159 69.8
Manes.06G082600 Manihot esculenta HOM05D005362 ORTHO05D006895 1.6e-54 217.2 158 69.0
Glyma.10G162500 Glycine max HOM05D005362 ORTHO05D006895 2.1e-54 216.9 160 70.6
Lalb_Chr07g0178371 Lupinus albus HOM05D005362 ORTHO05D006895 3.5e-54 216.1 161 69.6
PGSC0003DMG400024629 Solanum tuberosum HOM05D005362 ORTHO05D006895 4.6e-54 215.7 160 68.1
CAN.G1228.5 Capsicum annuum HOM05D005362 ORTHO05D006895 7.9e-54 214.9 160 68.8
COL.COLO4_24316 Corchorus olitorius HOM05D005362 ORTHO05D006895 7.9e-54 214.9 159 68.6
Lj2g0009795 Lotus japonicus HOM05D005362 ORTHO05D006895 7.9e-54 214.9 158 69.0
Oeu052452.1 Olea europaea HOM05D005362 ORTHO05D006895 7.9e-54 214.9 160 69.4
Aqoxy3G03650 Aquilegia oxysepala HOM05D005362 ORTHO05D006895 1.0e-53 214.5 169 65.1
Glyma.20G225100 Glycine max HOM05D005362 ORTHO05D006895 1.0e-53 214.5 159 71.1
Nitab4.5_0000939g0040 Nicotiana tabacum HOM05D005362 ORTHO05D006895 1.0e-53 214.5 160 68.1
Phvul.007G187600 Phaseolus vulgaris HOM05D005362 ORTHO05D006895 1.3e-53 214.2 167 68.3
Cc11_g04710 Coffea canephora HOM05D005362 ORTHO05D006895 2.3e-53 213.4 160 67.5
Nitab4.5_0003441g0070 Nicotiana tabacum HOM05D005362 ORTHO05D006895 2.3e-53 213.4 160 68.1
Solyc03g114920.1 Solanum lycopersicum HOM05D005362 ORTHO05D006895 2.3e-53 213.4 161 66.5
SGA_v2.0_scaffold28G11735 Striga asiatica HOM05D005362 ORTHO05D006895 3.9e-53 212.6 160 66.9
GSVIVG01008125001 Vitis vinifera HOM05D005362 ORTHO05D006895 3.9e-53 212.6 159 68.6
Lj1g0020401 Lotus japonicus HOM05D005362 ORTHO05D006895 6.7e-53 211.8 158 68.4
VMungo0720G1218 Vigna mungo HOM05D005362 ORTHO05D006895 6.7e-53 211.8 159 69.8
THA.LOC104804616 Tarenaya hassleriana HOM05D005362 ORTHO05D006895 1.1e-52 211.1 161 69.6
Ca_17613_v3 Cicer arietinum L. HOM05D005362 ORTHO05D006895 3.3e-52 209.5 158 68.4
Aa31LG11G2340 Aethionema arabicum HOM05D005362 ORTHO05D006895 1.3e-51 207.6 161 67.1
Ah.11g048060 Amaranthus hybridus HOM05D005362 ORTHO05D006895 1.3e-51 207.6 159 66.0
Migut.B00504 Erythranthe guttata HOM05D005362 ORTHO05D006895 1.3e-51 207.6 160 64.4
DCAR_022335 Daucus carota HOM05D005362 ORTHO05D006895 8.2e-51 204.9 160 65.6
Hund02565 Selenicereus undatus HOM05D005362 ORTHO05D006895 8.2e-51 204.9 159 64.8
AUR62029951 Chenopodium quinoa HOM05D005362 ORTHO05D006895 3.1e-50 203.0 159 64.8
unitig_26.g9670 Utricularia gibba HOM05D005362 ORTHO05D006895 3.1e-50 203.0 160 64.4
TPR.G37431 Trifolium pratense HOM05D005362 ORTHO05D006895 5.3e-50 202.2 156 67.9
AUR62033752 Chenopodium quinoa HOM05D005362 ORTHO05D006895 3.4e-49 199.5 159 64.2
MELO3C017241.2 Cucumis melo HOM05D005362 ORTHO05D006895 3.4e-49 199.5 159 65.4
Thhalv10004006m.g Eutrema salsugineum HOM05D005362 ORTHO05D006895 5.8e-49 198.7 170 60.0
Psat7g043680 Pisum sativum HOM05D005362 ORTHO05D006895 1.0e-48 198.0 166 63.9
QL07p000780 Quercus lobata HOM05D005362 ORTHO05D006895 1.0e-48 198.0 162 64.8
AL8G37580 Arabidopsis lyrata HOM05D005362 ORTHO05D006895 1.7e-48 197.2 170 59.4
AT5G60960 Arabidopsis thaliana HOM05D005362 ORTHO05D006895 2.2e-48 196.8 170 58.8
Sed0019900 Sechium edule HOM05D005362 ORTHO05D006895 2.2e-48 196.8 159 62.9
MD06G1203500 Malus domestica HOM05D005362 ORTHO05D006895 2.9e-48 196.4 133 72.9
CARHR274640 Cardamine hirsuta HOM05D005362 ORTHO05D006895 3.8e-48 196.1 170 59.4
EL10Ac5g12946 Beta vulgaris HOM05D005362 ORTHO05D006895 1.1e-47 194.5 168 59.5
Medtr8g094650 Medicago truncatula HOM05D005362 ORTHO05D006895 1.1e-47 194.5 160 64.4
Carub.0008s2165 Capsella rubella HOM05D005362 ORTHO05D006895 4.2e-47 192.6 170 58.8
Sp2g24260 Schrenkiella parvula HOM05D005362 ORTHO05D006895 7.1e-47 191.8 169 58.0
Nitab4.5_0012631g0030 Nicotiana tabacum HOM05D005362 ORTHO05D006895 9.3e-47 191.4 153 65.4
SHI17437 Sapria himalayana HOM05D005362 ORTHO05D006895 2.7e-46 189.9 158 64.6
vmacro16484 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 4.6e-46 189.1 143 62.9
PSO017G2138 Papaver somniferum HOM05D005362 ORTHO05D006895 7.9e-46 188.3 160 61.2
Nitab4.5_0010968g0030 Nicotiana tabacum HOM05D005362 ORTHO05D006895 1.3e-45 187.6 160 60.6
HPP92_008260 Vanilla planifolia HOM05D005362 ORTHO05D006895 1.3e-45 187.6 157 59.2
vmacro11106 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 8.7e-45 184.9 137 63.5
Sopen03g034000 Solanum pennellii HOM05D005362 ORTHO05D006895 3.3e-44 183.0 142 66.2
CsaV3_1G003420 Cucumis sativus L. HOM05D005362 ORTHO05D006895 5.7e-44 182.2 159 61.6
Cpa.g.sc67.22 Carica papaya HOM05D005362 ORTHO05D006895 9.7e-44 181.4 132 72.7
Hma1.2p1_0384F.1_g140800 Hydrangea macrophylla HOM05D005362 ORTHO05D006895 3.7e-43 179.5 159 57.9
Lsat_1_v5_gn_5_23641 Lactuca sativa HOM05D005362 ORTHO05D006895 1.4e-42 177.6 158 58.9
HPP92_008264 Vanilla planifolia HOM05D005362 ORTHO05D006895 3.1e-42 176.4 157 57.3
CDE10G0094 Ceratophyllum demersum HOM05D005362 ORTHO05D006895 2.6e-41 173.3 131 63.4
ClCG06G015530 Citrullus lanatus HOM05D005362 ORTHO05D006895 7.7e-41 171.8 158 59.5
Zm00001eb108830 Zea mays HOM05D005362 ORTHO05D006895 2.5e-39 166.8 166 53.0
BcaC06g33209 Brassica carinata HOM05D005362 ORTHO05D006895 5.5e-39 165.6 170 51.8
Os07g0603900 Oryza sativa ssp. japonica HOM05D005362 ORTHO05D006895 1.2e-38 164.5 166 53.0
HPP92_008265 Vanilla planifolia HOM05D005362 ORTHO05D006895 1.2e-38 164.5 141 60.3
ECA246G1962 Erigeron canadensis HOM05D005362 ORTHO05D006895 3.6e-38 162.9 157 55.4
PSO170G2279 Papaver somniferum HOM05D005362 ORTHO05D006895 4.6e-38 162.5 160 54.4
SHI19627 Sapria himalayana HOM05D005362 ORTHO05D006895 1.0e-37 161.4 141 62.4
vmacro08819 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 1.8e-37 160.6 159 55.3
A03p46670 Brassica napus HOM05D005362 ORTHO05D006895 5.7e-36 155.6 140 58.6
RcHm_v2.0_Chr7g0224181 Rosa chinensis HOM05D005362 ORTHO05D006895 1.1e-31 141.4 94 73.4
PSO017G2639 Papaver somniferum HOM05D005362 ORTHO05D006895 1.4e-31 141.0 131 58.8
PSO478G3079 Papaver somniferum HOM05D005362 ORTHO05D006895 1.2e-30 137.9 160 48.1
Medtr0265s0020 Medicago truncatula HOM05D005362 ORTHO05D006895 5.0e-24 115.9 109 57.8
Medtr1g058940 Medicago truncatula HOM05D005362 ORTHO05D006895 5.0e-24 115.9 109 57.8
Nitab4.5_0003441g0090 Nicotiana tabacum HOM05D005362 ORTHO05D006895 1.4e-21 107.8 66 74.2
Atru.chr9.504 Acer truncatum HOM05D005362 ORTHO05D006895 6.1e-14 82.4 78 62.8
CDE07G0962 Ceratophyllum demersum HOM05D003675 ORTHO05D004318 8.3e-11 72.0 104 32.7
unitig_749.g13427 Utricularia gibba HOM05D005362 ORTHO05D006895 1.4e-10 71.2 57 59.6
Sabra12G0047300 Salix brachista HOM05D007937 ORTHO05D010000 5.3e-10 69.3 143 29.4
Potri.012G068400 Populus trichocarpa HOM05D007937 ORTHO05D010000 1.6e-09 67.8 104 31.7
FAN18G3292 Fragaria x ananassa HOM05D005362 ORTHO05D006895 3.5e-09 66.6 156 30.8
FAN13G0622 Fragaria x ananassa HOM05D005362 ORTHO05D006895 5.9e-09 65.9 152 30.3
Lsat_1_v5_gn_4_109161 Lactuca sativa HOM05D007937 ORTHO05D010000 7.7e-09 65.5 101 32.7
FvH4_5g13580 Fragaria vesca HOM05D005362 ORTHO05D006895 1.0e-08 65.1 156 30.8
ATR0208G029 Amborella trichopoda HOM05D007937 ORTHO05D010000 1.3e-08 64.7 161 29.2
TPR.G31001 Trifolium pratense HOM05D005362 ORTHO05D006895 1.3e-08 64.7 68 52.9
Os10g0422300 Oryza sativa ssp. japonica HOM05D007937 ORTHO05D010000 6.5e-08 62.4 110 31.8
FvH4_7g15150 Fragaria vesca HOM05D005362 ORTHO05D006895 8.5e-08 62.0 33 90.9
Zm00001eb047840 Zea mays HOM05D007937 ORTHO05D010000 8.5e-08 62.0 108 34.3
Eucgr.K02538 Eucalyptus grandis HOM05D005362 ORTHO05D006895 2.5e-07 60.5 47 72.3
CiPaw.05G164900 Carya illinoinensis HOM05D007937 ORTHO05D010000 4.2e-07 59.7 162 28.4
PGR044G2646 Punica granatum HOM05D005362 ORTHO05D006895 5.5e-07 59.3 57 64.9
Haze_07650 Corylus avellana HOM05D007937 ORTHO05D010000 7.2e-07 58.9 104 30.8
DCAR_016813 Daucus carota HOM05D007937 ORTHO05D010000 1.6e-06 57.8 104 30.8
TWI73G0154 Tripterygium wilfordii HOM05D007937 ORTHO05D010000 1.6e-06 57.8 104 29.8


User provided reference genes

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