Gene: Sopen03g034000

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g034000
  • Transcript Identifier Sopen03g034000.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 69160798-69162363 : negative

Gene Family Information

  • ID HOM05D005362
  • #Genes/#Species 142/87
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g034000.1

Descriptions

  • Description Pentatricopeptide repeat (PPR) superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G60960
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G60960

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G60960
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G60960

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
17.7.1.3.1 Protein biosynthesis.organelle machinery.mitochondrial ribosome.mitochondrial ribosome-associated proteins.regulatory protein (PNM1)