Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G0088 Fragaria x ananassa HOM05D003188 ORTHO05D003602 6.7e-44 180.3 89 100.0
FvH4_5g12750 Fragaria vesca HOM05D003188 ORTHO05D003602 8.8e-44 179.9 88 100.0
FAN08G1208 Fragaria x ananassa HOM05D003188 ORTHO05D003602 8.8e-44 179.9 88 100.0
FAN18G0006 Fragaria x ananassa HOM05D003188 ORTHO05D003602 8.8e-44 179.9 88 100.0
RcHm_v2.0_Chr7g0184541 Rosa chinensis HOM05D003188 ORTHO05D003602 7.4e-43 176.8 88 96.6
GSVIVG01029101001 Vitis vinifera HOM05D003188 ORTHO05D003602 2.6e-40 168.3 88 88.6
Prupe.5G216800 Prunus persica HOM05D003188 ORTHO05D003602 5.9e-40 167.2 87 90.8
Cpa.g.sc3890.1 Carica papaya HOM05D003188 ORTHO05D003602 7.7e-40 166.8 87 89.7
TWI81G0274 Tripterygium wilfordii HOM05D003188 ORTHO05D003602 1.7e-39 165.6 88 87.5
MD06G1210700 Malus domestica HOM05D003188 ORTHO05D003602 3.8e-39 164.5 89 89.9
Thecc.01G174500 Theobroma cacao HOM05D003188 ORTHO05D003602 6.5e-39 163.7 88 87.5
MD14G1221400 Malus domestica HOM05D003188 ORTHO05D003602 8.5e-39 163.3 89 88.8
TWI15G1168 Tripterygium wilfordii HOM05D003188 ORTHO05D003602 8.5e-39 163.3 88 85.2
Gohir.A11G155400 Gossypium hirsutum HOM05D003188 ORTHO05D003602 1.9e-38 162.2 88 86.4
Gohir.D11G162400 Gossypium hirsutum HOM05D003188 ORTHO05D003602 1.9e-38 162.2 88 86.4
Gorai.007G172700 Gossypium raimondii HOM05D003188 ORTHO05D003602 4.2e-38 161.0 88 86.4
CSS0039000 Camellia sinensis var. sinensis HOM05D003188 ORTHO05D003602 9.4e-38 159.8 88 85.2
Cfa016042 Carpinus fangiana HOM05D003188 ORTHO05D003602 1.6e-37 159.1 88 84.1
Haze_18599 Corylus avellana HOM05D003188 ORTHO05D003602 1.6e-37 159.1 88 84.1
QL10p022977 Quercus lobata HOM05D003188 ORTHO05D003602 1.6e-37 159.1 88 83.0
Potri.015G051000 Populus trichocarpa HOM05D003188 ORTHO05D003602 2.1e-37 158.7 88 85.2
Atru.chr2.2945 Acer truncatum HOM05D003188 ORTHO05D003602 2.7e-37 158.3 88 81.8
Rhsim09G0110400 Rhododendron simsii HOM05D003188 ORTHO05D003602 4.7e-37 157.5 88 84.1
Atru.chr12.1495 Acer truncatum HOM05D003188 ORTHO05D003602 6.1e-37 157.1 88 81.8
Actinidia30194 Actinidia chinensis HOM05D003188 ORTHO05D003602 6.1e-37 157.1 87 82.8
Manes.01G020800 Manihot esculenta HOM05D003188 ORTHO05D003602 6.1e-37 157.1 88 83.0
Lj5A144T29 Lonicera japonica HOM05D003188 ORTHO05D003602 8.0e-37 156.8 88 83.0
Sc02g0004270 Simmondsia chinensis HOM05D003188 ORTHO05D003602 1.4e-36 156.0 88 80.7
CiPaw.09G173500 Carya illinoinensis HOM05D003188 ORTHO05D003602 2.3e-36 155.2 88 80.7
Dinv36902 Davidia involucrata HOM05D003188 ORTHO05D003602 3.9e-36 154.5 87 82.8
Eucgr.B00695 Eucalyptus grandis HOM05D003188 ORTHO05D003602 3.9e-36 154.5 88 80.7
Duzib138G0729 Durio zibethinus HOM05D003188 ORTHO05D003602 5.2e-36 154.1 89 84.3
Gorai.001G093700 Gossypium raimondii HOM05D003188 ORTHO05D003602 5.2e-36 154.1 88 83.0
Gohir.D07G087600 Gossypium hirsutum HOM05D003188 ORTHO05D003602 1.1e-35 152.9 88 81.8
Lj9A216T28 Lonicera japonica HOM05D003188 ORTHO05D003602 2.0e-35 152.1 88 79.5
arahy.Tifrunner.gnm1.ann1.36CJM4 Arachis hypogaea HOM05D003188 ORTHO05D003602 2.6e-35 151.8 88 81.8
HanXRQChr02g0055261 Helianthus annuus HOM05D003188 ORTHO05D003602 4.4e-35 151.0 87 80.5
Nn3g17701 Nelumbo nucifera HOM05D003188 ORTHO05D003602 4.4e-35 151.0 88 77.3
Ciclev10019993m.g Citrus clementina HOM05D003188 ORTHO05D003602 5.7e-35 150.6 88 80.7
Cc04_g07560 Coffea canephora HOM05D003188 ORTHO05D003602 5.7e-35 150.6 87 80.5
TAR371G0535 Trochodendron aralioides HOM05D003188 ORTHO05D003602 5.7e-35 150.6 88 79.5
arahy.Tifrunner.gnm1.ann1.MGXB0Y Arachis hypogaea HOM05D003188 ORTHO05D003602 7.4e-35 150.2 88 80.7
Sed0010135 Sechium edule HOM05D003188 ORTHO05D003602 1.3e-34 149.4 88 78.4
Sabra10G0074600 Salix brachista HOM05D003188 ORTHO05D003602 1.7e-34 149.1 88 78.4
HPP92_009419 Vanilla planifolia HOM05D003188 ORTHO05D003602 1.7e-34 149.1 87 74.7
DCAR_011343 Daucus carota HOM05D003188 ORTHO05D003602 2.2e-34 148.7 87 77.0
Hund13349 Selenicereus undatus HOM05D003188 ORTHO05D003602 2.2e-34 148.7 87 75.9
MELO3C017285.2 Cucumis melo HOM05D003188 ORTHO05D003602 2.8e-34 148.3 87 78.2
Oeu050638.1 Olea europaea HOM05D003188 ORTHO05D003602 2.8e-34 148.3 87 79.3
Ca_02535_v3 Cicer arietinum L. HOM05D003188 ORTHO05D003602 3.7e-34 147.9 88 78.4
Glyma.05G013500 Glycine max HOM05D003188 ORTHO05D003602 3.7e-34 147.9 88 78.4
SalBow7G4400 Salvia bowleyana HOM05D003188 ORTHO05D003602 3.7e-34 147.9 88 78.4
DCAR_015131 Daucus carota HOM05D003188 ORTHO05D003602 8.2e-34 146.7 87 75.9
Manes.12G158000 Manihot esculenta HOM05D003188 ORTHO05D003602 1.1e-33 146.4 88 76.1
PGR083G2637 Punica granatum HOM05D003188 ORTHO05D003602 1.1e-33 146.4 87 77.0
A10p01840 Brassica napus HOM05D003188 ORTHO05D003602 1.4e-33 146.0 88 77.3
C05p01820 Brassica napus HOM05D003188 ORTHO05D003602 1.4e-33 146.0 88 77.3
BolC5t28960H Brassica oleracea HOM05D003188 ORTHO05D003602 1.4e-33 146.0 88 77.3
BraA10t42457Z Brassica rapa HOM05D003188 ORTHO05D000504 1.4e-33 146.0 88 77.3
Lalb_Chr12g0197111 Lupinus albus HOM05D003188 ORTHO05D003602 1.8e-33 145.6 88 75.0
MSTRG.6539 Avicennia marina HOM05D003188 ORTHO05D003602 2.4e-33 145.2 87 77.0
Lsat_1_v5_gn_8_11621 Lactuca sativa HOM05D003188 ORTHO05D003602 2.4e-33 145.2 89 77.5
Lj2g0027481 Lotus japonicus HOM05D003188 ORTHO05D003602 2.4e-33 145.2 88 77.3
Lalb_Chr12g0197531 Lupinus albus HOM05D003188 ORTHO05D003602 2.4e-33 145.2 88 75.0
CAN.G438.112 Capsicum annuum HOM05D003188 ORTHO05D003602 5.3e-33 144.1 87 78.2
Glyma.17G121700 Glycine max HOM05D003188 ORTHO05D003602 7.0e-33 143.7 88 77.3
PSO017G4721 Papaver somniferum HOM05D003188 ORTHO05D003602 7.0e-33 143.7 87 79.3
PSO478G1890 Papaver somniferum HOM05D003188 ORTHO05D003602 7.0e-33 143.7 87 79.3
CsaV3_1G003600 Cucumis sativus L. HOM05D003188 ORTHO05D003602 9.1e-33 143.3 87 75.9
THA.LOC104811602 Tarenaya hassleriana HOM05D003188 ORTHO05D003602 9.1e-33 143.3 88 71.6
CDE05G2945 Ceratophyllum demersum HOM05D003188 ORTHO05D003602 1.2e-32 142.9 88 73.9
Oeu058326.2 Olea europaea HOM05D003188 ORTHO05D003602 1.2e-32 142.9 87 75.9
Peaxi162Scf00015g00637 Petunia axillaris HOM05D003188 ORTHO05D003602 1.2e-32 142.9 87 77.0
QL10p058686 Quercus lobata HOM05D003188 ORTHO05D003602 1.2e-32 142.9 85 80.0
BcaC05g24548 Brassica carinata HOM05D003188 ORTHO05D003602 1.6e-32 142.5 88 75.0
Lsat_1_v5_gn_6_3380 Lactuca sativa HOM05D003188 ORTHO05D003602 1.6e-32 142.5 89 76.4
ECA234G2517 Erigeron canadensis HOM05D003188 ORTHO05D003602 2.0e-32 142.1 88 76.1
Sp1g02280 Schrenkiella parvula HOM05D003188 ORTHO05D003602 2.0e-32 142.1 88 76.1
CARHR002580 Cardamine hirsuta HOM05D003188 ORTHO05D003602 2.6e-32 141.7 88 73.9
Nitab4.5_0000410g0090 Nicotiana tabacum HOM05D003188 ORTHO05D003602 2.6e-32 141.7 87 77.0
Nitab4.5_0003716g0120 Nicotiana tabacum HOM05D003188 ORTHO05D003602 2.6e-32 141.7 87 77.0
Os08g0343300 Oryza sativa ssp. japonica HOM05D003188 ORTHO05D003602 2.6e-32 141.7 87 72.4
Solyc03g119790.3 Solanum lycopersicum HOM05D003188 ORTHO05D003602 2.6e-32 141.7 87 77.0
Sopen03g038640 Solanum pennellii HOM05D003188 ORTHO05D003602 2.6e-32 141.7 87 77.0
PGSC0003DMG400005704 Solanum tuberosum HOM05D003188 ORTHO05D003602 2.6e-32 141.7 87 77.0
SGA_v2.0_scaffold159G37605 Striga asiatica HOM05D003188 ORTHO05D003602 3.5e-32 141.4 87 75.9
VMungo1215G2257 Vigna mungo HOM05D003188 ORTHO05D003602 3.5e-32 141.4 87 74.7
Phvul.003G177500 Phaseolus vulgaris HOM05D003188 ORTHO05D003602 4.5e-32 141.0 87 74.7
CDE05G0460 Ceratophyllum demersum HOM05D003188 ORTHO05D003602 7.7e-32 140.2 88 71.6
Duzib133G0881 Durio zibethinus HOM05D003188 ORTHO05D003602 1.0e-31 139.8 90 77.8
Lj4g0026321 Lotus japonicus HOM05D003188 ORTHO05D003602 1.0e-31 139.8 88 73.9
Hund05006 Selenicereus undatus HOM05D003188 ORTHO05D003602 1.0e-31 139.8 87 71.3
Zm00001eb028110 Zea mays HOM05D003188 ORTHO05D003602 1.0e-31 139.8 87 71.3
AL1G12780 Arabidopsis lyrata HOM05D003188 ORTHO05D003602 1.3e-31 139.4 88 72.7
COL.COLO4_19984 Corchorus olitorius HOM05D003188 ORTHO05D003602 1.3e-31 139.4 89 77.5
THA.LOC104803141 Tarenaya hassleriana HOM05D003188 ORTHO05D003602 1.3e-31 139.4 88 69.3
MSTRG.14163 Avicennia marina HOM05D003188 ORTHO05D003602 2.2e-31 138.7 87 73.6
CANSAT64G2546 Cannabis sativa HOM05D003188 ORTHO05D003602 2.9e-31 138.3 90 73.3
ClCG06G015050 Citrullus lanatus HOM05D003188 ORTHO05D003602 2.9e-31 138.3 109 63.3
Aa31LG1G9260 Aethionema arabicum HOM05D003188 ORTHO05D003602 3.8e-31 137.9 87 73.6
ATR0787G140 Amborella trichopoda HOM05D003188 ORTHO05D003602 3.8e-31 137.9 88 70.5
Potri.010G102000 Populus trichocarpa HOM05D003188 ORTHO05D003602 3.8e-31 137.9 88 73.9
Carub.0001s0239 Capsella rubella HOM05D003188 ORTHO05D003602 8.5e-31 136.7 87 72.4
arahy.Tifrunner.gnm1.ann1.73QXIF Arachis hypogaea HOM05D003188 ORTHO05D003602 1.9e-30 135.6 87 72.4
Migut.H01201 Erythranthe guttata HOM05D003188 ORTHO05D003602 2.5e-30 135.2 87 72.4
SEGI_20097 Sequoiadendron giganteum HOM05D003188 ORTHO05D003602 2.5e-30 135.2 87 69.0
SGA_v2.0_scaffold34G13894 Striga asiatica HOM05D003188 ORTHO05D003602 2.5e-30 135.2 101 68.3
Atru.chr3.1253 Acer truncatum HOM05D003188 ORTHO05D003602 3.2e-30 134.8 76 78.9
AT1G03280 Arabidopsis thaliana HOM05D003188 ORTHO05D003602 3.2e-30 134.8 88 70.5
Aqoxy3G03899 Aquilegia oxysepala HOM05D003188 ORTHO05D003602 4.2e-30 134.4 88 69.3
arahy.Tifrunner.gnm1.ann1.8N8EX2 Arachis hypogaea HOM05D003188 ORTHO05D003602 5.5e-30 134.0 87 71.3
Glyma.06G210400 Glycine max HOM05D003188 ORTHO05D003602 1.6e-29 132.5 87 69.0
Glyma.04G146000 Glycine max HOM05D003188 ORTHO05D003602 2.1e-29 132.1 87 70.1
VMungo1309G2361 Vigna mungo HOM05D003188 ORTHO05D003602 2.7e-29 131.7 88 68.2
Aqoxy5G00582 Aquilegia oxysepala HOM05D003188 ORTHO05D003602 3.6e-29 131.3 88 67.0
Thhalv10023437m.g Eutrema salsugineum HOM05D003188 ORTHO05D003602 4.7e-29 131.0 87 69.0
Phvul.009G200700 Phaseolus vulgaris HOM05D003188 ORTHO05D003602 4.7e-29 131.0 88 68.2
Carub.0007s2083 Capsella rubella HOM05D003188 ORTHO05D003602 6.1e-29 130.6 88 68.2
TAR629G2124 Trochodendron aralioides HOM05D003188 ORTHO05D003602 6.1e-29 130.6 86 72.1
EL10Ac2g04540 Beta vulgaris HOM05D003188 ORTHO05D003602 1.4e-28 129.4 87 69.0
AUR62023272 Chenopodium quinoa HOM05D003188 ORTHO05D003602 1.8e-28 129.0 87 70.1
AUR62009031 Chenopodium quinoa HOM05D003188 ORTHO05D003602 2.3e-28 128.6 84 71.4
Actinidia37847 Actinidia chinensis HOM05D003188 ORTHO05D003602 3.0e-28 128.3 88 65.9
AL7G33550 Arabidopsis lyrata HOM05D003188 ORTHO05D003602 5.2e-28 127.5 88 65.9
Sed0006028 Sechium edule HOM05D003188 ORTHO05D003602 8.8e-28 126.7 86 67.4
CiPaw.12G051000 Carya illinoinensis HOM05D003188 ORTHO05D003602 1.5e-27 125.9 88 71.6
Gohir.A07G084654 Gossypium hirsutum HOM05D003188 ORTHO05D003602 4.4e-27 124.4 68 83.8
Lj1g0006529 Lotus japonicus HOM05D003188 ORTHO05D003602 1.3e-26 122.9 88 65.9
AT4G20340 Arabidopsis thaliana HOM05D003188 ORTHO05D003602 2.2e-26 122.1 87 64.4
Mapoly0046s0071 Marchantia polymorpha HOM05D003188 ORTHO05D003602 3.7e-26 121.3 90 64.4
Carub.0007s2063 Capsella rubella HOM05D003188 ORTHO05D003602 1.8e-25 119.0 87 67.8
CARHR227350 Cardamine hirsuta HOM05D003188 ORTHO05D003602 1.8e-25 119.0 88 64.8
Medtr8g077000 Medicago truncatula HOM05D003188 ORTHO05D003602 2.4e-25 118.6 105 61.9
RcHm_v2.0_Chr1g0365801 Rosa chinensis HOM05D003188 ORTHO05D003602 4.1e-25 117.9 91 65.9
ATR0580G381 Amborella trichopoda HOM05D003188 ORTHO05D003602 9.1e-25 116.7 84 63.1
Psat4g043680 Pisum sativum HOM05D003188 ORTHO05D003602 1.6e-24 115.9 91 64.8
SMO196G0219 Selaginella moellendorffii HOM05D003188 ORTHO05D003602 7.7e-24 113.6 91 61.5
RcHm_v2.0_Chr7g0184551 Rosa chinensis HOM05D003188 ORTHO05D003602 1.3e-23 112.8 88 65.9
Aqoxy3G00385 Aquilegia oxysepala HOM05D003188 ORTHO05D003602 2.2e-23 112.1 88 65.9
BcaC09g51427 Brassica carinata HOM05D003188 ORTHO05D003602 3.8e-23 111.3 80 61.2
C01p13220 Brassica napus HOM05D003188 ORTHO05D003602 3.8e-23 111.3 80 61.2
Pp3c27_3010 Physcomitrium patens HOM05D003188 ORTHO05D003602 6.5e-23 110.5 89 59.6
AagrBONN_evm.TU.Sc2ySwM_228.1658 Anthoceros agrestis HOM05D003188 ORTHO05D003602 1.1e-22 109.8 91 57.1
vmacro10787 Vaccinium macrocarpon HOM05D003188 ORTHO05D003602 1.9e-22 109.0 63 81.0
Migut.M00376 Erythranthe guttata HOM05D003188 ORTHO05D003602 3.2e-22 108.2 87 58.6
FAN03G2249 Fragaria x ananassa HOM05D003188 ORTHO05D003602 3.2e-22 108.2 91 60.4
FAN17G1577 Fragaria x ananassa HOM05D003188 ORTHO05D003602 3.2e-22 108.2 91 60.4
FAN18G2667 Fragaria x ananassa HOM05D003188 ORTHO05D003602 4.2e-22 107.8 88 63.6
BraA01t01064Z Brassica rapa HOM05D003188 ORTHO05D003602 5.5e-22 107.5 80 58.8
Thhalv10025149m.g Eutrema salsugineum HOM05D003188 ORTHO05D003602 5.5e-22 107.5 84 61.9
TPR.G26763 Trifolium pratense HOM05D003188 ORTHO05D003602 9.4e-22 106.7 90 61.1
FAN18G3545 Fragaria x ananassa HOM05D003188 ORTHO05D003602 1.6e-21 105.9 88 62.5
Sp7g18890 Schrenkiella parvula HOM05D003188 ORTHO05D003602 3.6e-21 104.8 88 58.0
A01p11180 Brassica napus HOM05D003188 ORTHO05D003602 4.7e-21 104.4 80 57.5
FAN04G1160 Fragaria x ananassa HOM05D003188 ORTHO05D003602 6.1e-21 104.0 82 63.4
BolC1t01296H Brassica oleracea HOM05D003188 ORTHO05D003602 1.8e-20 102.4 81 59.3
FvH4_7g21490 Fragaria vesca HOM05D003188 ORTHO05D003602 1.5e-19 99.4 84 60.7
SHI18941 Sapria himalayana HOM05D003188 ORTHO05D003602 3.4e-19 98.2 63 74.6
CBR_g8498 Chara braunii HOM05D003188 ORTHO05D003602 9.8e-19 96.7 93 53.8
PSO170G0558 Papaver somniferum HOM05D003188 ORTHO05D003602 1.3e-18 96.3 87 58.6
arahy.Tifrunner.gnm1.ann1.NH5Z51 Arachis hypogaea HOM05D003188 ORTHO05D003602 6.3e-18 94.0 87 56.3
HPP92_015357 Vanilla planifolia HOM05D001092 ORTHO05D000923 2.0e-16 89.0 63 65.1
arahy.Tifrunner.gnm1.ann1.Y7FW0X Arachis hypogaea HOM05D003188 ORTHO05D003602 1.1e-14 83.2 82 53.7
arahy.Tifrunner.gnm1.ann1.LTYE9H Arachis hypogaea HOM05D003188 ORTHO05D003602 2.0e-11 72.4 82 48.8
Os12g0140266 Oryza sativa ssp. japonica HOM05D003188 ORTHO05D003602 2.0e-11 72.4 87 44.8
Ah.16g101610 Amaranthus hybridus HOM05D003188 ORTHO05D003602 7.5e-11 70.5 51 66.7
Cc05_g04950 Coffea canephora HOM05D003188 ORTHO05D003602 1.8e-09 65.9 69 50.7
Cpa.g.sc79.50 Carica papaya HOM05D003188 ORTHO05D003602 2.4e-09 65.5 71 50.7
AT4G20810 Arabidopsis thaliana HOM05D003188 ORTHO05D003602 9.2e-09 63.5 88 40.9
FvH4_4g17460 Fragaria vesca HOM05D003188 ORTHO05D003602 5.9e-08 60.8 27 96.3
FAN11G0282 Fragaria x ananassa HOM05D003188 ORTHO05D003602 5.9e-08 60.8 27 96.3
AL7G33340 Arabidopsis lyrata HOM05D003188 ORTHO05D003602 7.8e-08 60.5 52 63.5
FvH4_6g19571 Fragaria vesca HOM05D003188 ORTHO05D003602 2.3e-07 58.9 27 92.6
FAN06G4431 Fragaria x ananassa HOM05D003188 ORTHO05D003602 2.3e-07 58.9 91 40.7
FAN14G3422 Fragaria x ananassa HOM05D003188 ORTHO05D003602 5.0e-07 57.8 27 88.9
EL10Ac4g09232 Beta vulgaris HOM05D003188 ORTHO05D003602 1.1e-06 56.6 87 40.2


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