Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G2437 Fragaria x ananassa HOM05D004873 ORTHO05D006122 0.0e+00 1181.8 763 100.0
FAN22G1569 Fragaria x ananassa HOM05D004873 ORTHO05D006122 0.0e+00 1144.4 770 96.9
FvH4_4g34571 Fragaria vesca HOM05D004873 ORTHO05D006122 0.0e+00 1116.7 765 95.4
FAN12G3868 Fragaria x ananassa HOM05D004873 ORTHO05D006122 0.0e+00 1112.8 765 95.7
FAN17G2310 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.0e-310 1068.1 764 92.9
RcHm_v2.0_Chr4g0443951 Rosa chinensis HOM05D004873 ORTHO05D006122 5.7e-301 1037.3 771 87.3
MD13G1091200 Malus domestica HOM05D004873 ORTHO05D006122 3.0e-217 759.2 779 71.2
Prupe.1G254700 Prunus persica HOM05D004873 ORTHO05D006122 9.4e-211 737.6 776 69.6
MD16G1091700 Malus domestica HOM05D004873 ORTHO05D006122 9.4e-203 711.1 777 67.8
Ciclev10030647m.g Citrus clementina HOM05D004873 ORTHO05D006122 5.5e-195 685.3 777 65.9
TWI18G0605 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.1e-192 677.6 779 66.9
Duzib248G0479 Durio zibethinus HOM05D004873 ORTHO05D006122 1.8e-190 670.2 783 64.1
GSVIVG01020233001 Vitis vinifera HOM05D004873 ORTHO05D006122 3.1e-190 669.5 787 65.9
Duzib251G0436 Durio zibethinus HOM05D004873 ORTHO05D006122 1.2e-189 667.5 779 63.0
Atru.chr11.2013 Acer truncatum HOM05D004873 ORTHO05D006122 2.0e-189 666.8 779 63.2
Nn4g22808 Nelumbo nucifera HOM05D004873 ORTHO05D006122 1.1e-182 644.4 782 63.4
Haze_12170 Corylus avellana HOM05D004873 ORTHO05D006122 1.4e-182 644.0 785 64.3
TWI36G0907 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.3e-180 637.5 777 66.2
TWI75G0297 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.9e-179 633.6 785 66.1
Manes.13G031000 Manihot esculenta HOM05D004873 ORTHO05D006122 2.3e-177 626.7 780 60.4
CiPaw.05G150500 Carya illinoinensis HOM05D004873 ORTHO05D006122 5.7e-176 622.1 777 61.0
Sed0006362 Sechium edule HOM05D004873 ORTHO05D006122 1.3e-175 620.9 775 60.3
MBI15_g36943_MAGBIO Magnolia biondii HOM05D004873 ORTHO05D006122 8.3e-175 618.2 783 62.6
ClCG05G025280 Citrullus lanatus HOM05D004873 ORTHO05D006122 1.1e-174 617.8 777 61.3
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 1.4e-174 617.5 789 60.2
Gorai.005G183000 Gossypium raimondii HOM05D004873 ORTHO05D006122 3.1e-174 616.3 782 63.2
QL03p061438 Quercus lobata HOM05D004873 ORTHO05D006122 3.1e-174 616.3 781 62.7
Gohir.D02G163000 Gossypium hirsutum HOM05D004873 ORTHO05D006122 2.7e-173 613.2 782 62.5
CsaV3_5G031610 Cucumis sativus L. HOM05D004873 ORTHO05D006122 2.9e-172 609.8 776 61.9
COL.COLO4_36971 Corchorus olitorius HOM05D004873 ORTHO05D006122 6.6e-172 608.6 783 53.1
Dinv24864 Davidia involucrata HOM05D004873 ORTHO05D006122 6.6e-172 608.6 786 57.3
CSS0025142 Camellia sinensis var. sinensis HOM05D004873 ORTHO05D006122 2.5e-171 606.7 793 61.2
Potri.008G147100 Populus trichocarpa HOM05D004873 ORTHO05D006122 7.2e-171 605.1 795 56.0
CANSAT01G1467 Cannabis sativa HOM05D004873 ORTHO05D006122 4.7e-170 602.4 784 60.6
Cfa009139 Carpinus fangiana HOM05D004873 ORTHO05D006122 4.7e-170 602.4 783 61.7
MELO3C012001.2 Cucumis melo HOM05D004873 ORTHO05D006122 4.0e-169 599.4 803 59.3
HPP92_019184 Vanilla planifolia HOM05D004873 ORTHO05D006122 2.6e-168 596.7 782 58.2
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 4.9e-167 592.4 781 61.7
Eucgr.B03347 Eucalyptus grandis HOM05D004873 ORTHO05D006122 4.9e-167 592.4 790 60.9
Gohir.A03G140300 Gossypium hirsutum HOM05D004873 ORTHO05D006122 4.9e-167 592.4 782 63.0
Sabra10G0067000 Salix brachista HOM05D004873 ORTHO05D006122 9.2e-166 588.2 786 60.2
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 1.2e-165 587.8 803 58.0
Dinv15307 Davidia involucrata HOM05D004873 ORTHO05D006122 2.7e-165 586.6 784 61.1
Lalb_Chr16g0392411 Lupinus albus HOM05D004873 ORTHO05D006122 4.6e-165 585.9 778 59.5
Actinidia01706 Actinidia chinensis HOM05D004873 ORTHO05D006122 8.6e-164 581.6 781 60.6
TAR622G0484 Trochodendron aralioides HOM05D004873 ORTHO05D006122 8.6e-164 581.6 772 58.9
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea HOM05D004873 ORTHO05D006122 2.8e-162 576.6 783 59.1
TAR374G0217 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.4e-161 574.3 779 59.2
arahy.Tifrunner.gnm1.ann1.QGK7DH Arachis hypogaea HOM05D004873 ORTHO05D006122 4.4e-160 569.3 807 58.0
Psat2g106600 Pisum sativum HOM05D004873 ORTHO05D006122 5.8e-160 568.9 783 57.0
DCAR_026543 Daucus carota HOM05D004873 ORTHO05D006122 1.6e-157 560.8 784 52.9
SGA_v2.0_scaffold165G38251 Striga asiatica HOM05D004873 ORTHO05D006122 7.8e-157 558.5 787 55.7
Potri.010G094700 Populus trichocarpa HOM05D004873 ORTHO05D006122 1.7e-156 557.4 786 59.8
Thecc.02G248000 Theobroma cacao HOM05D004873 ORTHO05D006122 4.3e-155 552.7 699 64.1
Medtr5g034430 Medicago truncatula HOM05D004873 ORTHO05D006122 5.6e-155 552.4 781 56.6
Ca_04600_v3 Cicer arietinum L. HOM05D004873 ORTHO05D006122 1.2e-154 551.2 781 52.9
Glyma.01G031400 Glycine max HOM05D004873 ORTHO05D006122 1.8e-153 547.4 779 57.1
Oeu055452.2 Olea europaea HOM05D004873 ORTHO05D006122 4.0e-153 546.2 788 53.0
TPR.G13590 Trifolium pratense HOM05D004873 ORTHO05D006122 4.0e-153 546.2 801 54.6
Lalb_Chr05g0228131 Lupinus albus HOM05D004873 ORTHO05D006122 3.4e-152 543.1 782 56.9
Sc11g0001220 Simmondsia chinensis HOM05D004873 ORTHO05D006122 7.5e-152 542.0 766 58.6
AUR62005371 Chenopodium quinoa HOM05D004873 ORTHO05D006122 1.3e-151 541.2 790 52.5
PSO832G2005 Papaver somniferum HOM05D004873 ORTHO05D006122 2.2e-151 540.4 790 59.4
Glyma.02G034300 Glycine max HOM05D004873 ORTHO05D006122 2.4e-150 537.0 777 55.5
vmacro01183 Vaccinium macrocarpon HOM05D004873 ORTHO05D006122 7.1e-150 535.4 780 57.6
PSO063G1237 Papaver somniferum HOM05D004873 ORTHO05D006122 1.6e-149 534.3 782 58.8
Phvul.002G071900 Phaseolus vulgaris HOM05D004873 ORTHO05D006122 2.7e-149 533.5 774 57.8
VMungo1215G2983 Vigna mungo HOM05D004873 ORTHO05D006122 5.1e-148 529.3 782 57.8
Lj2g0008447 Lotus japonicus HOM05D004873 ORTHO05D006122 1.1e-147 528.1 786 56.6
Lj6A805G39 Lonicera japonica HOM05D004873 ORTHO05D006122 9.5e-147 525.0 794 53.0
Peaxi162Scf00338g00218 Petunia axillaris HOM05D004873 ORTHO05D006122 3.6e-146 523.1 784 54.6
CAN.G376.10 Capsicum annuum HOM05D004873 ORTHO05D006122 4.7e-146 522.7 775 54.3
HPP92_019185 Vanilla planifolia HOM05D004873 ORTHO05D006122 8.9e-145 518.5 782 54.0
DCAR_024143 Daucus carota HOM05D004873 ORTHO05D006122 3.4e-144 516.5 792 51.6
PGSC0003DMG400030977 Solanum tuberosum HOM05D004873 ORTHO05D006122 2.9e-143 513.5 791 55.8
Cc11_g14610 Coffea canephora HOM05D004873 ORTHO05D006122 1.4e-142 511.1 790 53.3
C01p36930 Brassica napus HOM05D004873 ORTHO05D006122 1.9e-142 510.8 772 56.2
Sopen05g001620 Solanum pennellii HOM05D004873 ORTHO05D006122 3.2e-142 510.0 792 54.4
BolC1t03651H Brassica oleracea HOM05D004873 ORTHO05D006122 4.1e-142 509.6 772 58.4
BcaC09g49418 Brassica carinata HOM05D004873 ORTHO05D006122 7.1e-142 508.8 770 58.1
Lalb_Chr05g0216921 Lupinus albus HOM05D004873 ORTHO05D006122 3.9e-140 503.1 737 51.6
BraA01t02979Z Brassica rapa HOM05D004873 ORTHO05D006122 4.3e-139 499.6 773 57.8
Rhsim12G0047400 Rhododendron simsii HOM05D004873 ORTHO05D006122 3.6e-138 496.5 842 53.9
A01p29150 Brassica napus HOM05D004873 ORTHO05D006122 1.8e-137 494.2 773 57.4
MSTRG.7893 Avicennia marina HOM05D004873 ORTHO05D006122 3.1e-137 493.4 768 50.7
ATR0691G293 Amborella trichopoda HOM05D004873 ORTHO05D006122 7.6e-136 488.8 784 53.7
PGR102G2017 Punica granatum HOM05D004873 ORTHO05D006122 1.3e-135 488.0 796 53.8
Migut.L01408 Erythranthe guttata HOM05D004873 ORTHO05D006122 2.7e-133 480.3 783 52.2
BcaC02g10690 Brassica carinata HOM05D004873 ORTHO05D006122 6.0e-133 479.2 765 56.1
C04p26690 Brassica napus HOM05D004873 ORTHO05D006122 6.0e-133 479.2 765 56.1
BolC4t24137H Brassica oleracea HOM05D004873 ORTHO05D006122 6.0e-133 479.2 765 56.1
Lsat_1_v5_gn_4_6981 Lactuca sativa HOM05D004873 ORTHO05D006122 7.8e-133 478.8 771 54.0
BcaC06g31808 Brassica carinata HOM05D004873 ORTHO05D006122 1.3e-132 478.0 774 54.3
AL2G16455 Arabidopsis lyrata HOM05D004873 ORTHO05D006122 3.9e-132 476.5 773 54.3
BcaB04g20256 Brassica carinata HOM05D004873 ORTHO05D006122 5.1e-132 476.1 766 56.8
ECA199G0004 Erigeron canadensis HOM05D004873 ORTHO05D006122 6.6e-132 475.7 794 53.0
Carub.0002s0504 Capsella rubella HOM05D004873 ORTHO05D006122 8.7e-132 475.3 775 53.2
CARHR052750 Cardamine hirsuta HOM05D004873 ORTHO05D006122 1.1e-131 474.9 785 53.2
HanXRQChr12g0383471 Helianthus annuus HOM05D004873 ORTHO05D006122 8.1e-130 468.8 787 52.9
Cpa.g.sc69.19 Carica papaya HOM05D004873 ORTHO05D006122 1.1e-129 468.4 770 47.3
Thhalv10023242m.g Eutrema salsugineum HOM05D004873 ORTHO05D006122 9.0e-129 465.3 780 55.9
Zm00001eb042420 Zea mays HOM05D004873 ORTHO05D006122 5.8e-128 462.6 778 54.1
AUR62014033 Chenopodium quinoa HOM05D004873 ORTHO05D006122 9.9e-128 461.8 787 49.2
Sp2g04470 Schrenkiella parvula HOM05D004873 ORTHO05D006122 9.9e-128 461.8 772 54.9
AT1G60200 Arabidopsis thaliana HOM05D004873 ORTHO05D006122 3.8e-127 459.9 769 53.4
Aa31LG2G10110 Aethionema arabicum HOM05D004873 ORTHO05D006122 5.4e-126 456.1 788 53.2
TAR629G1177 Trochodendron aralioides HOM05D004873 ORTHO05D006122 7.1e-126 455.7 707 50.1
FvH4_4g34570 Fragaria vesca HOM05D004873 ORTHO05D006122 1.2e-125 454.9 258 93.0
Nitab4.5_0000113g0270 Nicotiana tabacum HOM05D004873 ORTHO05D006122 3.5e-125 453.4 754 45.4
FAN12G0889 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.5e-123 448.0 258 91.9
SEGI_30430 Sequoiadendron giganteum HOM05D004873 ORTHO05D006122 1.8e-121 441.0 779 53.8
EL10Ac6g13668 Beta vulgaris HOM05D004873 ORTHO05D006122 4.9e-119 433.0 784 52.3
unitig_27.g25195 Utricularia gibba HOM05D004873 ORTHO05D006122 8.7e-116 422.2 757 46.5
THA.LOC104819547 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 4.0e-113 413.3 756 49.7
Hund05991 Selenicereus undatus HOM05D004873 ORTHO05D006122 3.4e-112 410.2 753 53.7
THA.LOC104819514 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 7.6e-112 409.1 762 50.4
Pp3c25_3310 Physcomitrium patens HOM05D004873 ORTHO05D006122 5.5e-102 376.3 819 48.4
Zm00001eb179020 Zea mays HOM05D004873 ORTHO05D006122 4.6e-101 373.2 716 51.0
Ah.03g132650 Amaranthus hybridus HOM05D004873 ORTHO05D006122 4.3e-99 366.7 786 46.9
Mapoly0148s0032 Marchantia polymorpha HOM05D004873 ORTHO05D006122 1.4e-92 345.1 830 48.3
Pp3c16_19090 Physcomitrium patens HOM05D004873 ORTHO05D006122 3.9e-92 343.6 807 45.2
Oeu056734.1 Olea europaea HOM05D004873 ORTHO05D006122 2.9e-87 327.4 770 43.4
C05p51270 Brassica napus HOM05D004873 ORTHO05D006122 1.4e-81 308.5 583 56.1
Actinidia08168 Actinidia chinensis HOM05D004873 ORTHO05D006122 3.1e-81 307.4 555 55.3
Nitab4.5_0010954g0010 Nicotiana tabacum HOM05D004873 ORTHO05D006122 1.3e-79 302.0 286 61.9
Solyc05g005620.4 Solanum lycopersicum HOM05D004873 ORTHO05D006122 4.8e-74 283.5 286 62.2
CDE01G0488 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 3.6e-61 240.7 254 63.4
SMO117G0118 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 6.1e-61 240.0 756 40.1
PSO675G2898 Papaver somniferum HOM05D004873 ORTHO05D006122 4.0e-60 237.3 244 56.1
Os08g0416400 Oryza sativa ssp. japonica HOM05D004873 ORTHO05D006122 2.3e-55 221.5 291 47.1
CDE02G2726 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 1.2e-48 199.1 165 64.2
CDE01G0278 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 1.7e-47 195.3 273 47.6
CBR_g45271 Chara braunii HOM05D000019 ORTHO05D000002 6.2e-45 186.8 287 47.7
CDE02G2297 Ceratophyllum demersum HOM05D001801 ORTHO05D001739 7.5e-43 179.9 160 60.6
SHI27198 Sapria himalayana HOM05D004873 ORTHO05D006122 3.7e-42 177.6 126 70.6
FAN22G0459 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.6e-29 134.4 83 86.7
Aqoxy1G03520 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 3.2e-25 121.3 71 84.5
MCO16G428 Micromonas commoda HOM05D004873 ORTHO05D006122 9.6e-22 109.8 148 43.2
Medtr5g034435 Medicago truncatula HOM05D004873 ORTHO05D006122 3.6e-21 107.8 71 76.1
Cre08.g375084 Chlamydomonas reinhardtii HOM05D004873 ORTHO05D006122 6.9e-20 103.6 127 48.8
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 1.7e-15 89.0 127 40.9
PRCOL_00005912 Prasinoderma coloniale HOM05D004873 ORTHO05D006122 8.7e-15 86.7 127 37.0
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 1.5e-14 85.9 188 31.9
SMO119G0006 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 5.6e-14 84.0 114 47.4
PSO339G1217 Papaver somniferum HOM05D004873 ORTHO05D006122 5.8e-11 73.9 113 36.3
PSO017G6017 Papaver somniferum HOM05D004873 ORTHO05D006122 7.6e-11 73.6 146 32.2
Actinidia27784 Actinidia chinensis HOM05D004873 ORTHO05D026408 8.4e-10 70.1 61 63.9
ECA247G0578 Erigeron canadensis HOM05D004873 ORTHO05D006122 9.3e-09 66.6 118 45.8
Sp6g02640 Schrenkiella parvula HOM05D004873 ORTHO05D006122 3.9e-07 61.2 125 40.8
PSO339G2267 Papaver somniferum HOM05D004266 ORTHO05D005151 2.5e-06 58.5 87 32.2
PSO339G5784 Papaver somniferum HOM05D004266 ORTHO05D005151 2.5e-06 58.5 87 32.2
SMO351G0499 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 3.3e-06 58.2 114 41.2
Sed0023525 Sechium edule HOM05D004266 ORTHO05D005151 9.6e-06 56.6 77 35.1


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