Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 8.1e-95 350.5 193 100.0
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.4e-93 345.1 193 98.4
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.4e-93 345.1 193 98.4
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.3e-92 343.2 193 97.9
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 4.9e-92 341.3 194 98.5
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.9e-92 341.3 194 98.5
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 2.5e-83 312.4 194 90.2
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 5.1e-65 251.5 205 70.7
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 8.2e-63 244.2 196 71.4
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 1.1e-62 243.8 203 71.4
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 1.8e-62 243.0 196 71.4
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 2.0e-61 239.6 203 68.0
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 2.2e-60 236.1 207 69.1
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 3.8e-60 235.3 197 69.0
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 3.2e-59 232.3 206 68.4
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 3.2e-59 232.3 206 68.4
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 5.5e-59 231.5 199 68.3
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 7.2e-59 231.1 206 68.0
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 8.0e-58 227.6 208 68.3
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 1.0e-57 227.3 207 66.7
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 1.0e-57 227.3 207 68.1
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 1.8e-57 226.5 207 66.2
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 1.8e-57 226.5 206 67.5
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 2.3e-57 226.1 207 66.7
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 3.9e-57 225.3 207 67.6
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 3.9e-57 225.3 207 66.7
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 6.7e-57 224.6 201 67.7
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 2.6e-56 222.6 207 64.3
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 4.4e-56 221.9 203 66.5
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 5.7e-56 221.5 201 68.2
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 5.7e-56 221.5 208 65.9
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 5.7e-56 221.5 205 66.3
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 7.4e-56 221.1 198 63.1
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 1.3e-55 220.3 206 67.0
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 1.3e-55 220.3 199 66.8
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 3.7e-55 218.8 202 66.3
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 4.8e-55 218.4 197 62.9
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 4.8e-55 218.4 201 64.2
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 8.2e-55 217.6 203 63.5
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 1.4e-54 216.9 209 62.2
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 1.4e-54 216.9 206 62.6
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 1.8e-54 216.5 205 62.0
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 2.4e-54 216.1 202 65.8
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 3.1e-54 215.7 207 66.2
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 5.3e-54 214.9 202 66.3
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 7.0e-54 214.5 202 66.3
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 9.1e-54 214.2 207 64.3
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 1.2e-53 213.8 204 65.7
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 1.6e-53 213.4 195 61.5
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 2.0e-53 213.0 203 64.0
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 4.5e-53 211.8 202 62.9
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 4.5e-53 211.8 206 64.1
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 4.5e-53 211.8 204 63.2
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 5.9e-53 211.5 206 62.6
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 7.7e-53 211.1 207 62.3
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 7.7e-53 211.1 207 61.8
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 1.3e-52 210.3 201 60.7
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 1.7e-52 209.9 203 61.6
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 2.9e-52 209.1 205 64.9
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 5.0e-52 208.4 208 64.9
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 5.0e-52 208.4 193 67.4
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 6.5e-52 208.0 193 66.8
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 1.1e-51 207.2 199 61.8
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 1.1e-51 207.2 205 66.3
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 1.1e-51 207.2 209 62.7
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 1.9e-51 206.5 193 62.2
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 2.5e-51 206.1 207 63.3
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 3.2e-51 205.7 214 59.8
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 4.2e-51 205.3 197 60.4
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 4.2e-51 205.3 214 59.8
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 5.5e-51 204.9 209 61.7
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 2.7e-50 202.6 207 61.4
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 6.1e-50 201.4 201 61.2
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 8.0e-50 201.1 209 61.2
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 1.0e-49 200.7 195 62.1
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.4e-49 200.3 207 59.9
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 1.8e-49 199.9 201 62.7
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 3.0e-49 199.1 208 58.7
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 6.8e-49 198.0 206 58.7
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 8.8e-49 197.6 216 60.2
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 1.5e-48 196.8 210 59.5
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 2.6e-48 196.1 206 63.1
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 2.6e-48 196.1 200 60.5
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 4.4e-48 195.3 207 62.8
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 5.7e-48 194.9 211 61.1
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 9.7e-48 194.1 207 62.3
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 9.7e-48 194.1 207 62.3
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 9.7e-48 194.1 207 62.3
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 9.7e-48 194.1 198 62.1
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 1.3e-47 193.7 204 62.7
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 1.3e-47 193.7 204 62.7
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 1.3e-47 193.7 202 59.9
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 1.7e-47 193.4 196 60.7
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 2.2e-47 193.0 205 62.4
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 2.2e-47 193.0 202 57.9
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 6.3e-47 191.4 213 60.6
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 6.3e-47 191.4 198 58.1
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 1.1e-46 190.7 200 61.5
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 2.4e-46 189.5 204 60.3
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 2.4e-46 189.5 211 60.7
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 3.1e-46 189.1 199 62.3
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 3.1e-46 189.1 206 61.2
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 3.1e-46 189.1 206 61.2
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 1.6e-45 186.8 201 60.2
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 3.5e-45 185.7 212 59.4
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 4.5e-45 185.3 204 59.8
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 5.9e-45 184.9 202 59.9
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 7.7e-45 184.5 205 60.5
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 1.0e-44 184.1 197 59.4
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 1.7e-44 183.3 196 61.7
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 2.2e-44 183.0 206 59.2
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 3.8e-44 182.2 201 59.7
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 5.0e-44 181.8 188 60.1
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 5.0e-44 181.8 201 59.7
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 6.5e-44 181.4 194 59.3
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 1.9e-43 179.9 208 59.6
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 3.2e-43 179.1 194 59.8
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 3.2e-43 179.1 195 60.5
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 5.5e-43 178.3 204 59.8
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 3.6e-42 175.6 199 61.3
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 4.7e-42 175.3 194 56.2
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 6.1e-42 174.9 208 58.2
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 4.0e-41 172.2 174 63.2
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 8.8e-41 171.0 202 58.4
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 2.0e-40 169.9 208 58.2
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 2.6e-40 169.5 200 55.0
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 2.2e-39 166.4 197 55.8
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 3.7e-39 165.6 205 54.6
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 3.7e-39 165.6 207 55.6
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 1.1e-35 154.1 179 57.5
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 6.1e-34 148.3 172 51.2
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 8.0e-34 147.9 206 48.5
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 1.8e-33 146.7 203 51.2
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 1.5e-32 143.7 203 50.2
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 2.0e-32 143.3 201 50.7
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 8.3e-31 137.9 199 44.2
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 1.1e-30 137.5 113 67.3
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 5.4e-30 135.2 176 56.8
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 2.0e-29 133.3 141 52.5
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.3e-28 130.6 141 51.8
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.7e-28 130.2 141 51.8
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 3.9e-28 129.0 204 47.1
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 5.0e-28 128.6 180 47.2
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 1.4e-25 120.6 117 61.5
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 3.7e-23 112.5 144 45.8
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 5.4e-22 108.6 157 45.2
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 6.0e-21 105.1 149 52.3
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 5.6e-19 98.6 125 49.6
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 2.3e-17 93.2 142 44.4
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 4.0e-17 92.4 137 42.3
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 5.2e-17 92.0 163 43.6
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 6.8e-17 91.7 136 45.6
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 2.9e-15 86.3 74 63.5
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 2.4e-14 83.2 129 45.7
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.0e-12 77.8 131 42.7
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 3.0e-12 76.3 121 40.5
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 5.1e-12 75.5 135 43.0
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 5.1e-12 75.5 100 46.0
Cre10.g452100 Chlamydomonas reinhardtii HOM05D004549 ORTHO05D005390 1.4e-09 67.4 134 35.8
Solyc10g077120.3 Solanum lycopersicum HOM05D004549 ORTHO05D005390 8.9e-09 64.7 89 51.7


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