Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G1023 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.7e-51 205.7 100 100.0
FAN05G0547 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.2e-41 172.9 84 100.0
FAN09G0839 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.5e-36 156.0 85 88.2
FAN13G3028 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.2e-33 146.4 86 84.9
FvH4_7g01280 Fragaria vesca HOM05D002263 ORTHO05D003537 7.3e-23 110.5 58 96.6
FAN01G0038 Fragaria x ananassa HOM05D002263 ORTHO05D003537 7.3e-23 110.5 58 96.6
FAN03G0380 Fragaria x ananassa HOM05D002263 ORTHO05D003537 7.3e-23 110.5 58 96.6
FAN06G0127 Fragaria x ananassa HOM05D002263 ORTHO05D003537 7.3e-23 110.5 58 96.6
FAN10G1377 Fragaria x ananassa HOM05D002263 ORTHO05D003537 7.3e-23 110.5 58 96.6
FAN01G1372 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.1e-21 106.7 57 91.2
FAN21G0405 Fragaria x ananassa HOM05D002263 ORTHO05D016312 1.1e-21 106.7 57 91.2
RcHm_v2.0_Chr1g0317031 Rosa chinensis HOM05D002263 ORTHO05D003537 4.5e-20 101.3 62 87.1
CANSAT80G1724 Cannabis sativa HOM05D002263 ORTHO05D003537 2.2e-19 99.0 58 87.9
Carub.0003s2419 Capsella rubella HOM05D002263 ORTHO05D003537 4.2e-18 94.7 56 85.7
BcaNung00438 Brassica carinata HOM05D002263 ORTHO05D003537 1.2e-17 93.2 52 84.6
AL3G38880 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 1.6e-17 92.8 57 82.5
arahy.Tifrunner.gnm1.ann1.CKFG51 Arachis hypogaea HOM05D002263 ORTHO05D003537 2.1e-17 92.4 60 78.3
arahy.Tifrunner.gnm1.ann1.ES5MTE Arachis hypogaea HOM05D002263 ORTHO05D003537 2.1e-17 92.4 60 78.3
BcaC09g51672 Brassica carinata HOM05D002263 ORTHO05D003537 2.7e-17 92.0 57 82.5
C01p10550 Brassica napus HOM05D002263 ORTHO05D003537 2.7e-17 92.0 57 82.5
BolC1t01018H Brassica oleracea HOM05D002263 ORTHO05D003537 2.7e-17 92.0 57 82.5
Lj3g0016100 Lotus japonicus HOM05D002263 ORTHO05D003537 2.7e-17 92.0 57 78.9
GSVIVG01032138001 Vitis vinifera HOM05D002263 ORTHO05D003537 3.5e-17 91.7 56 82.1
CAN.G219.44 Capsicum annuum HOM05D002263 ORTHO05D003537 4.6e-17 91.3 71 67.6
THA.LOC104820131 Tarenaya hassleriana HOM05D002263 ORTHO05D003537 4.6e-17 91.3 53 84.9
TAR369G0754 Trochodendron aralioides HOM05D002263 ORTHO05D003537 4.6e-17 91.3 62 77.4
BraA01t00849Z Brassica rapa HOM05D002263 ORTHO05D003537 6.0e-17 90.9 57 80.7
A01p09010 Brassica napus HOM05D002263 ORTHO05D003537 7.9e-17 90.5 58 79.3
Thhalv10024219m.g Eutrema salsugineum HOM05D002263 ORTHO05D003537 7.9e-17 90.5 58 82.8
Phvul.005G024200 Phaseolus vulgaris HOM05D002263 ORTHO05D003537 7.9e-17 90.5 53 84.9
Prupe.2G017500 Prunus persica HOM05D002263 ORTHO05D003537 7.9e-17 90.5 59 78.0
Prupe.2G018500 Prunus persica HOM05D002263 ORTHO05D003537 7.9e-17 90.5 59 78.0
VMungo1080G1747 Vigna mungo HOM05D002263 ORTHO05D003537 7.9e-17 90.5 53 84.9
CSS0021570 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 1.0e-16 90.1 55 81.8
CSS0033402 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 1.0e-16 90.1 55 81.8
CARHR061100 Cardamine hirsuta HOM05D002263 ORTHO05D003537 1.0e-16 90.1 58 77.6
TAR623G1165 Trochodendron aralioides HOM05D002263 ORTHO05D003537 1.0e-16 90.1 62 75.8
Sp7g26900 Schrenkiella parvula HOM05D002263 ORTHO05D003537 1.8e-16 89.4 58 77.6
Aa31LG5G18570 Aethionema arabicum HOM05D002263 ORTHO05D003537 2.3e-16 89.0 55 81.8
AT3G23890 Arabidopsis thaliana HOM05D002263 ORTHO05D003537 2.3e-16 89.0 60 78.3
PGSC0003DMG400006793 Solanum tuberosum HOM05D002263 ORTHO05D003537 2.3e-16 89.0 71 66.2
BcaNung01342 Brassica carinata HOM05D002263 ORTHO05D003537 3.0e-16 88.6 60 78.3
Ciclev10030505m.g Citrus clementina HOM05D002263 ORTHO05D003537 3.0e-16 88.6 94 54.3
Mapoly0050s0134 Marchantia polymorpha HOM05D002263 ORTHO05D003537 3.0e-16 88.6 52 78.8
Rhsim01G0127100 Rhododendron simsii HOM05D002263 ORTHO05D003537 3.0e-16 88.6 56 78.6
Rhsim01G0128300 Rhododendron simsii HOM05D002263 ORTHO05D003537 3.0e-16 88.6 56 78.6
MD02G1308000 Malus domestica HOM05D002263 ORTHO05D003537 3.9e-16 88.2 63 74.6
CiPaw.05G149100 Carya illinoinensis HOM05D002263 ORTHO05D003537 5.1e-16 87.8 61 73.8
CiPaw.14G001600 Carya illinoinensis HOM05D002263 ORTHO05D003537 5.1e-16 87.8 61 73.8
MELO3C023986.2 Cucumis melo HOM05D002263 ORTHO05D003537 5.1e-16 87.8 60 78.3
Lalb_Chr19g0140281 Lupinus albus HOM05D002263 ORTHO05D003537 5.1e-16 87.8 57 75.4
MD07G1017700 Malus domestica HOM05D002263 ORTHO05D003537 5.1e-16 87.8 62 74.2
Nitab4.5_0002918g0080 Nicotiana tabacum HOM05D002263 ORTHO05D003537 5.1e-16 87.8 57 75.4
Sopen01g034420 Solanum pennellii HOM05D002263 ORTHO05D003537 5.1e-16 87.8 57 75.4
Nn7g36258 Nelumbo nucifera HOM05D002263 ORTHO05D003537 6.7e-16 87.4 62 74.2
Psat7g085320 Pisum sativum HOM05D002263 ORTHO05D003537 6.7e-16 87.4 55 78.2
QL04p008074 Quercus lobata HOM05D002263 ORTHO05D003537 6.7e-16 87.4 75 69.3
CsaV3_3G032050 Cucumis sativus L. HOM05D002263 ORTHO05D003537 8.7e-16 87.0 60 78.3
QL04p008574 Quercus lobata HOM05D002263 ORTHO05D003537 8.7e-16 87.0 75 66.7
Zm00001eb188030 Zea mays HOM05D002263 ORTHO05D003537 8.7e-16 87.0 51 80.4
Cc02_g28170 Coffea canephora HOM05D002263 ORTHO05D003537 1.1e-15 86.7 53 83.0
Ca_14467_v3 Cicer arietinum L. HOM05D002263 ORTHO05D003537 1.5e-15 86.3 55 76.4
Glyma.10G090000 Glycine max HOM05D002263 ORTHO05D003537 1.5e-15 86.3 54 79.6
Glyma.15G276000 Glycine max HOM05D002263 ORTHO05D003537 1.5e-15 86.3 54 79.6
Nitab4.5_0000707g0240 Nicotiana tabacum HOM05D002263 ORTHO05D003537 1.5e-15 86.3 57 73.7
Psat0s825g0040 Pisum sativum HOM05D002263 ORTHO05D003537 1.5e-15 86.3 55 76.4
TPR.G22438 Trifolium pratense HOM05D002263 ORTHO05D003537 1.5e-15 86.3 55 76.4
TPR.G27843 Trifolium pratense HOM05D002263 ORTHO05D003537 1.5e-15 86.3 55 76.4
TWI09G0750 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 1.5e-15 86.3 54 79.6
TWI73G0071 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 1.5e-15 86.3 54 79.6
vmacro14860 Vaccinium macrocarpon HOM05D002263 ORTHO05D003537 1.5e-15 86.3 63 71.4
Cfa010797 Carpinus fangiana HOM05D002263 ORTHO05D003537 1.9e-15 85.9 57 75.4
SalBow5G1665 Salvia bowleyana HOM05D002263 ORTHO05D003537 1.9e-15 85.9 61 72.1
Solyc01g087500.3 Solanum lycopersicum HOM05D002263 ORTHO05D003537 1.9e-15 85.9 57 73.7
Haze_03174 Corylus avellana HOM05D002263 ORTHO05D003537 2.5e-15 85.5 57 75.4
Dinv43424 Davidia involucrata HOM05D002263 ORTHO05D003537 2.5e-15 85.5 65 70.8
Atru.chr11.2587 Acer truncatum HOM05D002263 ORTHO05D003537 3.3e-15 85.1 91 56.0
FAN26G0899 Fragaria x ananassa HOM05D002263 ORTHO05D016312 3.3e-15 85.1 54 75.9
FAN26G1597 Fragaria x ananassa HOM05D002263 ORTHO05D016312 3.3e-15 85.1 54 75.9
Hund15422 Selenicereus undatus HOM05D002263 ORTHO05D003537 3.3e-15 85.1 79 60.8
arahy.Tifrunner.gnm1.ann1.VJ5EI6 Arachis hypogaea HOM05D002263 ORTHO05D003537 4.3e-15 84.7 60 73.3
Eucgr.H02748 Eucalyptus grandis HOM05D002263 ORTHO05D003537 4.3e-15 84.7 58 72.4
Hma1.2p1_2160F.1_g315570 Hydrangea macrophylla HOM05D002263 ORTHO05D003537 4.3e-15 84.7 54 79.6
Lsat_1_v5_gn_1_105720 Lactuca sativa HOM05D002263 ORTHO05D003537 4.3e-15 84.7 64 71.9
ClCG10G012270 Citrullus lanatus HOM05D002263 ORTHO05D003537 5.6e-15 84.3 58 74.1
Sed0024297 Sechium edule HOM05D002263 ORTHO05D003537 5.6e-15 84.3 58 74.1
arahy.Tifrunner.gnm1.ann1.NCP65V Arachis hypogaea HOM05D002263 ORTHO05D003537 7.4e-15 84.0 60 70.0
Medtr3g031040 Medicago truncatula HOM05D002263 ORTHO05D003537 7.4e-15 84.0 55 74.5
Lj9C634T13 Lonicera japonica HOM05D002263 ORTHO05D003537 1.3e-14 83.2 54 75.9
Nn2g15271 Nelumbo nucifera HOM05D002263 ORTHO05D003537 1.3e-14 83.2 57 73.7
Sed0008745 Sechium edule HOM05D002263 ORTHO05D003537 1.3e-14 83.2 60 75.0
Oeu049493.1 Olea europaea HOM05D002263 ORTHO05D003537 1.6e-14 82.8 63 66.7
PSO063G6561 Papaver somniferum HOM05D002263 ORTHO05D003537 1.6e-14 82.8 64 70.3
PSO832G4242 Papaver somniferum HOM05D002263 ORTHO05D003537 1.6e-14 82.8 64 70.3
Peaxi162Scf00744g00349 Petunia axillaris HOM05D002263 ORTHO05D003537 1.6e-14 82.8 57 68.4
Thecc.10G041300 Theobroma cacao HOM05D002263 ORTHO05D003537 1.6e-14 82.8 53 79.2
Zm00001eb251620 Zea mays HOM05D002263 ORTHO05D003537 1.6e-14 82.8 51 76.5
PGR031G1196 Punica granatum HOM05D002263 ORTHO05D003537 2.1e-14 82.4 57 73.7
Eucgr.H02633 Eucalyptus grandis HOM05D002263 ORTHO05D003537 2.8e-14 82.0 61 68.9
unitig_8.g3777 Utricularia gibba HOM05D002263 ORTHO05D003537 2.8e-14 82.0 59 71.2
Gohir.A10G219600 Gossypium hirsutum HOM05D002263 ORTHO05D003537 3.7e-14 81.6 53 77.4
Gohir.D10G229100 Gossypium hirsutum HOM05D002263 ORTHO05D003537 3.7e-14 81.6 53 77.4
Gorai.011G261600 Gossypium raimondii HOM05D002263 ORTHO05D003537 3.7e-14 81.6 53 77.4
AagrBONN_evm.TU.Sc2ySwM_344.3755 Anthoceros agrestis HOM05D002263 ORTHO05D003537 4.8e-14 81.3 62 69.4
Aqoxy2G00154 Aquilegia oxysepala HOM05D002263 ORTHO05D003537 4.8e-14 81.3 51 78.4
AUR62009398 Chenopodium quinoa HOM05D002263 ORTHO05D003537 4.8e-14 81.3 68 63.2
Manes.10G140100 Manihot esculenta HOM05D002263 ORTHO05D003537 4.8e-14 81.3 56 73.2
Actinidia31076 Actinidia chinensis HOM05D002263 ORTHO05D003537 6.2e-14 80.9 57 71.9
Duzib106G1002 Durio zibethinus HOM05D002263 ORTHO05D003537 6.2e-14 80.9 53 77.4
ATR0332G038 Amborella trichopoda HOM05D002263 ORTHO05D003537 8.1e-14 80.5 62 64.5
ECA248G0809 Erigeron canadensis HOM05D002263 ORTHO05D003537 8.1e-14 80.5 53 71.7
Sed0003769 Sechium edule HOM05D002263 ORTHO05D003537 8.1e-14 80.5 56 67.9
HPP92_014707 Vanilla planifolia HOM05D002263 ORTHO05D003537 8.1e-14 80.5 60 68.3
Ah.10g038760 Amaranthus hybridus HOM05D002263 ORTHO05D003537 1.1e-13 80.1 69 56.5
MSTRG.20571 Avicennia marina HOM05D002263 ORTHO05D003537 1.1e-13 80.1 62 69.4
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 1.4e-13 79.7 60 68.3
AUR62023080 Chenopodium quinoa HOM05D002263 ORTHO05D003537 1.8e-13 79.3 68 61.8
Potri.001G264000 Populus trichocarpa HOM05D002263 ORTHO05D003537 1.8e-13 79.3 54 74.1
CDE10G0015 Ceratophyllum demersum HOM05D002263 ORTHO05D003537 3.1e-13 78.6 61 68.9
FAN09G4539 Fragaria x ananassa HOM05D002263 ORTHO05D016312 3.1e-13 78.6 57 71.9
COL.COLO4_15050 Corchorus olitorius HOM05D002263 ORTHO05D003537 4.0e-13 78.2 51 78.4
unitig_22.g5326 Utricularia gibba HOM05D002263 ORTHO05D003537 4.0e-13 78.2 59 71.2
SGA_v2.0_scaffold119G32746 Striga asiatica HOM05D002263 ORTHO05D003537 5.3e-13 77.8 61 67.2
SEGI_10251 Sequoiadendron giganteum HOM05D002263 ORTHO05D003537 9.0e-13 77.0 56 67.9
SMO147G0130 Selaginella moellendorffii HOM05D002263 ORTHO05D003537 1.2e-12 76.6 41 82.9
SMO330G0020 Selaginella moellendorffii HOM05D002263 ORTHO05D003537 1.2e-12 76.6 41 82.9
MBI02_g23141_MAGBIO Magnolia biondii HOM05D002263 ORTHO05D003537 1.5e-12 76.3 63 61.9
DCAR_022381 Daucus carota HOM05D002263 ORTHO05D003537 3.4e-12 75.1 52 71.2
Sabra16G0162200 Salix brachista HOM05D002263 ORTHO05D016312 5.8e-12 74.3 36 94.4
Potri.009G058900 Populus trichocarpa HOM05D002263 ORTHO05D003537 2.9e-11 72.0 54 68.5
Sabra09G0043200 Salix brachista HOM05D002263 ORTHO05D003537 3.8e-11 71.6 54 68.5
Ah.02g122490 Amaranthus hybridus HOM05D002263 ORTHO05D003537 4.9e-11 71.2 41 80.5
Migut.B01281 Erythranthe guttata HOM05D002263 ORTHO05D003537 4.9e-11 71.2 35 91.4
Pp3c19_3610 Physcomitrium patens HOM05D002263 ORTHO05D003537 4.9e-11 71.2 69 55.1
RhsimUnG0044300 Rhododendron simsii HOM05D002263 ORTHO05D003537 4.9e-11 71.2 57 66.7
SEGI_32368 Sequoiadendron giganteum HOM05D002263 ORTHO05D003537 8.4e-11 70.5 57 63.2
Cre01.g009250 Chlamydomonas reinhardtii HOM05D002263 ORTHO05D003537 1.1e-10 70.1 53 66.0
Lj2C383G13 Lonicera japonica HOM05D002263 ORTHO05D003537 1.1e-10 70.1 63 61.9
Os02g0699700 Oryza sativa ssp. japonica HOM05D002263 ORTHO05D003537 1.1e-10 70.1 52 69.2
HanXRQChr01g0016471 Helianthus annuus HOM05D002263 ORTHO05D003537 2.5e-10 68.9 35 88.6
HanXRQChr14g0447821 Helianthus annuus HOM05D002263 ORTHO05D003537 2.5e-10 68.9 35 88.6
Pp3c18_20260 Physcomitrium patens HOM05D002263 ORTHO05D003537 3.2e-10 68.6 67 56.7
Pp3c18_20261 Physcomitrium patens HOM05D002263 ORTHO05D003537 3.2e-10 68.6 67 56.7
CBR_g55332 Chara braunii HOM05D002263 ORTHO05D003537 5.5e-10 67.8 57 59.6
Sc16g0001930 Simmondsia chinensis HOM05D002263 ORTHO05D003537 7.1e-10 67.4 35 80.0
Rhsim09G0080900 Rhododendron simsii HOM05D002263 ORTHO05D003537 4.6e-09 64.7 51 62.7
Ah.06g183060 Amaranthus hybridus HOM05D002263 ORTHO05D003537 6.0e-09 64.3 37 78.4
MCO05G739 Micromonas commoda HOM05D002263 ORTHO05D003537 7.9e-09 63.9 57 57.9
PRCOL_00004802 Prasinoderma coloniale HOM05D002263 ORTHO05D003537 1.3e-08 63.2 53 58.5
SGA_v2.0_scaffold105G30414 Striga asiatica HOM05D002263 ORTHO05D003537 1.6e-06 56.2 35 71.4
AL8G27570 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 2.8e-06 55.5 56 51.8
AL8G14170 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 4.8e-06 54.7 56 50.0
SGA_v2.0_scaffold147G36324 Striga asiatica HOM05D002263 ORTHO05D016312 4.8e-06 54.7 42 57.1


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