Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 0.0e+00 1133.6 610 100.0
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 0.0e+00 1099.0 619 94.5
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 0.0e+00 1094.7 619 91.8
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 0.0e+00 1083.9 619 90.6
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 0.0e+00 1081.2 619 90.0
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.0e-289 997.7 591 88.3
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 2.1e-253 879.0 631 73.1
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 3.9e-191 672.2 599 59.9
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 5.1e-183 645.2 554 63.9
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 5.6e-158 562.0 585 55.6
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 1.8e-156 557.0 537 57.0
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 1.9e-153 547.0 546 56.2
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 2.1e-152 543.5 532 53.9
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 5.1e-151 538.9 557 54.4
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 1.3e-149 534.3 531 53.7
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 5.8e-147 525.4 532 54.3
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 1.0e-146 524.6 557 53.1
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 2.9e-146 523.1 534 54.1
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 3.8e-146 522.7 560 54.3
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 6.5e-146 521.9 560 52.5
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 8.4e-146 521.5 525 51.8
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 8.4e-146 521.5 530 52.6
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 3.2e-145 519.6 549 50.8
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 5.1e-143 512.3 597 48.9
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 2.4e-140 503.4 544 51.8
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 1.2e-139 501.1 540 52.4
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 2.6e-139 500.0 533 49.9
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 7.6e-139 498.4 553 51.2
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 8.4e-138 495.0 535 51.2
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 1.1e-137 494.6 526 49.0
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 1.6e-136 490.7 523 50.5
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 2.7e-136 490.0 533 50.3
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 5.1e-135 485.7 589 47.5
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 8.7e-135 485.0 559 48.7
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 1.1e-134 484.6 564 48.6
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 2.2e-133 480.3 553 49.9
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 6.3e-133 478.8 527 48.0
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 3.4e-131 473.0 566 46.5
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 1.7e-130 470.7 566 45.9
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 2.9e-130 469.9 519 50.9
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 1.4e-129 467.6 556 48.9
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 2.1e-128 463.8 566 47.3
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 5.1e-127 459.1 522 48.1
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 5.1e-127 459.1 536 49.8
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.1e-126 458.0 543 48.8
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 3.3e-126 456.4 556 47.5
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 2.8e-125 453.4 548 45.6
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 4.8e-125 452.6 554 47.3
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 1.1e-124 451.4 529 49.0
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 9.1e-124 448.4 572 46.9
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 1.0e-122 444.9 543 44.8
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 1.3e-122 444.5 570 46.7
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 8.5e-122 441.8 559 44.7
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 1.6e-120 437.6 541 46.4
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 6.7e-119 432.2 552 46.9
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 6.7e-119 432.2 593 42.2
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 3.3e-118 429.9 530 47.2
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 3.3e-118 429.9 561 45.8
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 7.4e-118 428.7 553 45.9
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 1.7e-117 427.6 547 44.6
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 4.8e-117 426.0 561 45.5
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 2.4e-116 423.7 552 46.4
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 5.3e-116 422.5 537 47.3
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 7.0e-116 422.2 541 46.2
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 1.2e-115 421.4 557 46.3
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 8.8e-111 405.2 548 45.6
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 8.2e-109 398.7 546 40.1
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 3.1e-108 396.7 512 43.8
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 3.5e-107 393.3 392 56.9
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 2.9e-106 390.2 538 45.4
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 8.5e-106 388.7 572 42.0
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 3.2e-105 386.7 580 42.1
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 4.2e-105 386.3 547 43.0
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 1.6e-104 384.4 604 40.1
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 8.3e-101 372.1 403 54.1
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 1.1e-100 371.7 469 47.1
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 1.4e-100 371.3 354 53.1
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 1.2e-99 368.2 484 41.7
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 2.7e-99 367.1 566 40.1
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 3.8e-98 363.2 553 40.5
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 4.0e-95 353.2 510 40.0
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 1.2e-94 351.7 460 48.3
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 1.2e-91 341.7 506 39.9
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 2.0e-91 340.9 375 48.0
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 2.0e-91 340.9 365 53.7
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 3.6e-88 330.1 369 48.8
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 3.6e-88 330.1 561 40.1
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 1.4e-87 328.2 342 50.3
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 1.3e-85 321.6 530 38.7
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 1.9e-81 307.8 565 34.5
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 1.6e-80 304.7 554 35.4
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 2.0e-78 297.7 513 36.5
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 1.1e-76 292.0 251 61.8
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 6.0e-75 286.2 354 44.4
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 3.0e-74 283.9 466 40.8
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 6.6e-74 282.7 510 35.3
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 1.2e-72 278.5 510 34.3
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 2.6e-70 270.8 641 30.4
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 1.1e-63 248.8 314 43.0
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 3.1e-63 247.3 642 30.1
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 4.1e-60 236.9 348 39.9
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 7.8e-59 232.6 312 43.9
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 2.1e-56 224.6 222 55.0
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 4.7e-56 223.4 257 46.3
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 8.1e-48 196.1 284 45.8
Haze_20519 Corylus avellana HOM05D004644 ORTHO05D005700 8.1e-40 169.5 158 60.1
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 2.6e-38 164.5 123 63.4
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 2.2e-37 161.4 267 35.2
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 1.9e-36 158.3 126 58.7
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 3.2e-36 157.5 114 65.8
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 1.2e-35 155.6 150 51.3
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 9.6e-33 146.0 108 61.1
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 4.8e-32 143.7 116 59.5
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 1.3e-29 135.6 101 52.5
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.7e-29 135.2 117 53.8
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 2.5e-28 131.3 91 63.7
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 3.2e-28 131.0 135 47.4
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 7.1e-28 129.8 110 55.5
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 9.3e-28 129.4 110 57.3
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 1.2e-27 129.0 88 65.9
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 3.0e-26 124.4 471 27.4
Nn2g13824 Nelumbo nucifera HOM05D004644 ORTHO05D005700 3.7e-24 117.5 152 46.1
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 4.1e-23 114.0 83 56.6
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 7.6e-22 109.8 105 51.4
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 1.7e-21 108.6 90 51.1
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 3.8e-21 107.5 94 52.1
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 2.3e-18 98.2 69 58.0
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 3.9e-18 97.4 91 53.8
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 3.9e-18 97.4 75 62.7
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 5.1e-18 97.1 81 51.9
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 1.1e-17 95.9 75 61.3
Atru.chr8.1774 Acer truncatum HOM05D004644 ORTHO05D005700 4.3e-17 94.0 72 55.6
SEGI_17091 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.1e-15 87.8 197 29.4
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 4.1e-15 87.4 84 40.5
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 6.9e-15 86.7 108 41.7
FvH4_7g08751 Fragaria vesca HOM05D004644 ORTHO05D005700 2.2e-13 81.6 86 50.0
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 4.2e-12 77.4 78 46.2
SEGI_16111 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.6e-11 74.3 71 47.9
ATR0763G245 Amborella trichopoda HOM05D004644 ORTHO05D005700 4.6e-11 73.9 62 48.4
Sabra10G0175900 Salix brachista HOM05D004644 ORTHO05D005700 1.0e-10 72.8 96 38.5
SEGI_30494 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.8e-10 72.0 75 40.0
PSO801G0518 Papaver somniferum HOM05D004644 ORTHO05D005700 2.3e-10 71.6 75 42.7
SEGI_09432 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.9e-10 70.9 68 47.1
SEGI_20900 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.9e-10 70.9 68 47.1
Glyma.18G219501 Glycine max HOM05D000076 ORTHO05D005700 5.7e-09 67.0 63 50.8
AT5G03750 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 9.7e-09 66.2 50 56.0
Lj3C988T3 Lonicera japonica HOM05D004644 ORTHO05D005700 1.3e-08 65.9 43 67.4
SEGI_00616 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.1e-07 62.8 114 28.1
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.8e-07 62.0 48 47.9
Glyma.07G162100 Glycine max HOM05D003568 ORTHO05D004104 3.1e-07 61.2 55 50.9
ECA232G2196 Erigeron canadensis HOM05D004644 ORTHO05D005700 6.9e-07 60.1 57 47.4


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