Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2679 Fragaria x ananassa HOM05D002235 ORTHO05D006252 9.1e-87 323.6 165 100.0
FvH4_6g43280 Fragaria vesca HOM05D002235 ORTHO05D006252 2.0e-54 216.1 115 96.5
FAN05G0628 Fragaria x ananassa HOM05D002235 ORTHO05D006252 2.3e-53 212.6 115 95.7
FAN14G5807 Fragaria x ananassa HOM05D002235 ORTHO05D006252 1.1e-50 203.8 133 82.7
RcHm_v2.0_Chr2g0159551 Rosa chinensis HOM05D002235 ORTHO05D006252 7.5e-49 197.6 115 87.0
Prupe.1G100300 Prunus persica HOM05D002235 ORTHO05D006252 3.6e-43 178.7 115 77.4
Dinv05442 Davidia involucrata HOM05D002235 ORTHO05D006252 5.8e-41 171.4 115 76.5
MD17G1096300 Malus domestica HOM05D002235 ORTHO05D006252 1.7e-40 169.9 116 75.9
Hma1.2p1_1748F.1_g300670 Hydrangea macrophylla HOM05D002235 ORTHO05D006252 2.9e-40 169.1 115 76.5
PGR042G1696 Punica granatum HOM05D002235 ORTHO05D006252 3.8e-40 168.7 115 72.2
CANSAT64G1242 Cannabis sativa HOM05D002235 ORTHO05D006252 1.1e-39 167.2 115 72.2
MD09G1108400 Malus domestica HOM05D002235 ORTHO05D006252 1.4e-39 166.8 123 69.9
GSVIVG01030599001 Vitis vinifera HOM05D002235 ORTHO05D006252 1.4e-39 166.8 115 73.0
Potri.014G153000 Populus trichocarpa HOM05D002235 ORTHO05D006252 2.4e-39 166.0 114 71.1
Cfa014413 Carpinus fangiana HOM05D002235 ORTHO05D006252 3.2e-39 165.6 115 73.9
Atru.chr6.3175 Acer truncatum HOM05D002235 ORTHO05D006252 4.1e-39 165.2 115 69.6
CiPaw.03G160500 Carya illinoinensis HOM05D002235 ORTHO05D006252 2.7e-38 162.5 115 71.3
Psat1g066560 Pisum sativum HOM05D002235 ORTHO05D006252 3.5e-38 162.2 115 69.6
Haze_12873 Corylus avellana HOM05D002235 ORTHO05D006252 6.0e-38 161.4 115 72.2
Sed0014516 Sechium edule HOM05D002235 ORTHO05D006252 1.7e-37 159.8 115 64.3
Ca_27441_v3 Cicer arietinum L. HOM05D002235 ORTHO05D006252 2.3e-37 159.5 115 67.8
Actinidia09712 Actinidia chinensis HOM05D002235 ORTHO05D006252 3.9e-37 158.7 115 69.6
Glyma.09G138400 Glycine max HOM05D002235 ORTHO05D006252 5.1e-37 158.3 115 66.1
Glyma.16G189100 Glycine max HOM05D002235 ORTHO05D006252 6.6e-37 157.9 115 67.0
Lj2g0022309 Lotus japonicus HOM05D002235 ORTHO05D006252 1.1e-36 157.1 116 68.1
Lalb_Chr03g0034571 Lupinus albus HOM05D002235 ORTHO05D006252 1.5e-36 156.8 115 67.0
CSS0042137 Camellia sinensis var. sinensis HOM05D002235 ORTHO05D006252 2.5e-36 156.0 104 73.1
PSO832G4463 Papaver somniferum HOM05D002235 ORTHO05D006252 2.5e-36 156.0 115 69.6
TPR.G8169 Trifolium pratense HOM05D002235 ORTHO05D006252 2.5e-36 156.0 115 65.2
Eucgr.A01711 Eucalyptus grandis HOM05D002235 ORTHO05D006252 3.3e-36 155.6 115 67.8
arahy.Tifrunner.gnm1.ann1.9LRG3U Arachis hypogaea HOM05D002235 ORTHO05D006252 4.3e-36 155.2 115 67.8
COL.COLO4_27703 Corchorus olitorius HOM05D002235 ORTHO05D006252 4.3e-36 155.2 115 66.1
Lalb_Chr01g0009331 Lupinus albus HOM05D002235 ORTHO05D006252 4.3e-36 155.2 115 66.1
PSO210G1973 Papaver somniferum HOM05D002235 ORTHO05D006252 4.3e-36 155.2 115 69.6
Thecc.02G313800 Theobroma cacao HOM05D002235 ORTHO05D006252 4.3e-36 155.2 115 67.8
MELO3C018813.2 Cucumis melo HOM05D002235 ORTHO05D006252 9.6e-36 154.1 109 64.2
MBI02_g28342_MAGBIO Magnolia biondii HOM05D002235 ORTHO05D006252 9.6e-36 154.1 115 67.8
CsaV3_7G003660 Cucumis sativus L. HOM05D002235 ORTHO05D006252 1.2e-35 153.7 112 62.5
MBI02_g15249_MAGBIO Magnolia biondii HOM05D002235 ORTHO05D006252 1.2e-35 153.7 115 67.8
Phvul.004G116200 Phaseolus vulgaris HOM05D002235 ORTHO05D006252 1.2e-35 153.7 115 65.2
THA.LOC104800989 Tarenaya hassleriana HOM05D002235 ORTHO05D006252 1.6e-35 153.3 115 67.0
Ciclev10016578m.g Citrus clementina HOM05D002235 ORTHO05D006252 2.1e-35 152.9 115 66.1
vmacro12207 Vaccinium macrocarpon HOM05D002235 ORTHO05D006252 2.1e-35 152.9 115 66.1
Rhsim06G0161200 Rhododendron simsii HOM05D002235 ORTHO05D006252 2.8e-35 152.5 115 64.3
VMungo0464G0253 Vigna mungo HOM05D002235 ORTHO05D006252 2.8e-35 152.5 115 64.3
Peaxi162Scf00062g01418 Petunia axillaris HOM05D002235 ORTHO05D006252 4.7e-35 151.8 114 64.9
Aa31LG1G19560 Aethionema arabicum HOM05D002235 ORTHO05D006252 1.1e-34 150.6 115 66.1
Gohir.D13G088300 Gossypium hirsutum HOM05D002235 ORTHO05D006252 1.1e-34 150.6 115 65.2
Nitab4.5_0001925g0020 Nicotiana tabacum HOM05D002235 ORTHO05D006252 1.1e-34 150.6 114 64.9
Thhalv10008693m.g Eutrema salsugineum HOM05D002235 ORTHO05D006252 1.4e-34 150.2 115 64.3
QL07p005233 Quercus lobata HOM05D002235 ORTHO05D006252 1.4e-34 150.2 115 66.1
TAR626G0760 Trochodendron aralioides HOM05D002235 ORTHO05D006252 1.4e-34 150.2 104 71.2
Gohir.A13G094300 Gossypium hirsutum HOM05D002235 ORTHO05D006252 1.8e-34 149.8 115 64.3
Gorai.013G101000 Gossypium raimondii HOM05D002235 ORTHO05D006252 1.8e-34 149.8 115 65.2
Duzib251G0293 Durio zibethinus HOM05D002235 ORTHO05D006252 3.1e-34 149.1 115 67.0
ClCG02G001880 Citrullus lanatus HOM05D002235 ORTHO05D006252 4.0e-34 148.7 124 58.1
Sed0015264 Sechium edule HOM05D002235 ORTHO05D006252 4.0e-34 148.7 115 58.3
Solyc12g100160.3 Solanum lycopersicum HOM05D002235 ORTHO05D006252 4.0e-34 148.7 143 54.5
Sabra14G0115900 Salix brachista HOM05D002235 ORTHO05D006252 5.2e-34 148.3 103 68.0
arahy.Tifrunner.gnm1.ann1.BMD0WJ Arachis hypogaea HOM05D002235 ORTHO05D006252 6.9e-34 147.9 157 52.9
Sopen12g034790 Solanum pennellii HOM05D002235 ORTHO05D006252 6.9e-34 147.9 114 63.2
PGSC0003DMG401023851 Solanum tuberosum HOM05D002235 ORTHO05D006252 6.9e-34 147.9 114 62.3
Sc06g0009540 Simmondsia chinensis HOM05D002235 ORTHO05D006252 8.9e-34 147.5 115 62.6
TWI36G0046 Tripterygium wilfordii HOM05D002235 ORTHO05D006252 1.2e-33 147.1 115 62.6
Nitab4.5_0010082g0050 Nicotiana tabacum HOM05D002235 ORTHO05D006252 2.0e-33 146.4 115 63.5
THA.LOC104826153 Tarenaya hassleriana HOM05D002235 ORTHO05D006252 2.6e-33 146.0 115 65.2
TWI18G1280 Tripterygium wilfordii HOM05D002235 ORTHO05D006252 2.6e-33 146.0 115 60.9
Lj8A125T69 Lonicera japonica HOM05D002235 ORTHO05D006252 4.4e-33 145.2 104 67.3
TAR624G1336 Trochodendron aralioides HOM05D002235 ORTHO05D006252 5.8e-33 144.8 103 70.9
BcaC07g42148 Brassica carinata HOM05D002235 ORTHO05D006252 9.9e-33 144.1 115 64.3
C08p51940 Brassica napus HOM05D002235 ORTHO05D006252 9.9e-33 144.1 115 64.3
Aqoxy1G03636 Aquilegia oxysepala HOM05D002235 ORTHO05D006252 2.2e-32 142.9 113 64.6
AL1G14950 Arabidopsis lyrata HOM05D002235 ORTHO05D006252 2.2e-32 142.9 116 62.9
AT1G05190 Arabidopsis thaliana HOM05D002235 ORTHO05D006252 3.8e-32 142.1 115 63.5
Carub.0001s0446 Capsella rubella HOM05D002235 ORTHO05D006252 3.8e-32 142.1 115 63.5
DCAR_019767 Daucus carota HOM05D002235 ORTHO05D006252 3.8e-32 142.1 103 68.0
Migut.H00629 Erythranthe guttata HOM05D002235 ORTHO05D006252 4.9e-32 141.7 115 60.9
A10p03720 Brassica napus HOM05D002235 ORTHO05D006252 6.4e-32 141.4 118 60.2
Hund22246 Selenicereus undatus HOM05D002235 ORTHO05D006252 6.4e-32 141.4 115 61.7
EL10Ac9g20979 Beta vulgaris HOM05D002235 ORTHO05D006252 8.4e-32 141.0 145 55.9
ECA234G2016 Erigeron canadensis HOM05D002235 ORTHO05D006252 8.4e-32 141.0 110 60.9
BolC8t52725H Brassica oleracea HOM05D002235 ORTHO05D006252 1.4e-31 140.2 116 63.8
BraA09t42090Z Brassica rapa HOM05D002235 ORTHO05D006252 1.4e-31 140.2 116 62.9
Lsat_1_v5_gn_5_125300 Lactuca sativa HOM05D002235 ORTHO05D006252 1.9e-31 139.8 111 61.3
BraA10t42645Z Brassica rapa HOM05D002235 ORTHO05D006252 2.4e-31 139.4 115 60.9
HanXRQChr10g0305801 Helianthus annuus HOM05D002235 ORTHO05D006252 2.4e-31 139.4 111 61.3
Sp1g04040 Schrenkiella parvula HOM05D002235 ORTHO05D006252 5.4e-31 138.3 115 60.0
SpUn0024_0100 Schrenkiella parvula HOM05D002235 ORTHO05D006252 5.4e-31 138.3 115 60.0
A09p67570 Brassica napus HOM05D002235 ORTHO05D006252 7.1e-31 137.9 116 62.1
C05p03420 Brassica napus HOM05D002235 ORTHO05D006252 9.3e-31 137.5 115 59.1
BolC5t29121H Brassica oleracea HOM05D002235 ORTHO05D006252 9.3e-31 137.5 115 59.1
Nn1g01949 Nelumbo nucifera HOM05D002235 ORTHO05D006252 1.6e-30 136.7 103 65.0
AUR62037131 Chenopodium quinoa HOM05D002235 ORTHO05D006252 4.6e-30 135.2 102 66.7
Nn3g19321 Nelumbo nucifera HOM05D002235 ORTHO05D006252 7.8e-30 134.4 108 64.8
Cpa.g.sc8.216 Carica papaya HOM05D002235 ORTHO05D006252 1.3e-29 133.7 98 66.3
CDE05G1249 Ceratophyllum demersum HOM05D002235 ORTHO05D006252 1.3e-29 133.7 115 60.0
Ah.01g005000 Amaranthus hybridus HOM05D002235 ORTHO05D006252 1.7e-29 133.3 104 65.4
arahy.Tifrunner.gnm1.ann1.R9SY1C Arachis hypogaea HOM05D002235 ORTHO05D006252 1.7e-29 133.3 115 60.0
CAN.G575.51 Capsicum annuum HOM05D002235 ORTHO05D006252 1.7e-29 133.3 96 64.6
AUR62025126 Chenopodium quinoa HOM05D002235 ORTHO05D006252 3.0e-29 132.5 87 73.6
Os03g0751400 Oryza sativa ssp. japonica HOM05D002235 ORTHO05D006252 6.6e-29 131.3 115 59.1
CDE05G1755 Ceratophyllum demersum HOM05D002235 ORTHO05D006252 1.5e-28 130.2 115 60.0
Potri.002G229325 Populus trichocarpa HOM05D002235 ORTHO05D006252 7.3e-28 127.9 103 61.2
CARHR004660 Cardamine hirsuta HOM05D002235 ORTHO05D006252 9.6e-28 127.5 117 58.1
ATR0752G019 Amborella trichopoda HOM05D002235 ORTHO05D006252 8.1e-27 124.4 115 56.5
MSTRG.23886 Avicennia marina HOM05D002235 ORTHO05D006252 8.1e-27 124.4 130 49.2
unitig_62.g23382 Utricularia gibba HOM05D002235 ORTHO05D006252 1.1e-26 124.0 115 56.5
SGA_v2.0_scaffold52G19164 Striga asiatica HOM05D002235 ORTHO05D006252 1.4e-26 123.6 126 51.6
Os03g0356300 Oryza sativa ssp. japonica HOM05D002235 ORTHO05D006252 2.4e-26 122.9 115 57.4
Manes.12G075000 Manihot esculenta HOM05D002235 ORTHO05D006252 3.1e-26 122.5 83 69.9
Zm00001eb394520 Zea mays HOM05D002235 ORTHO05D006252 6.9e-26 121.3 115 56.5
CSS0044404 Camellia sinensis var. sinensis HOM05D002235 ORTHO05D006252 1.3e-24 117.1 98 62.2
Zm00001eb017180 Zea mays HOM05D002235 ORTHO05D006252 1.3e-24 117.1 115 56.5
HPP92_004133 Vanilla planifolia HOM05D002235 ORTHO05D006252 3.2e-23 112.5 120 50.0
BcaB05g22264 Brassica carinata HOM05D002235 ORTHO05D006252 1.2e-22 110.5 116 51.7
BolC2t07645H Brassica oleracea HOM05D002235 ORTHO05D006252 2.1e-22 109.8 116 52.6
Cc03_g16290 Coffea canephora HOM05D002235 ORTHO05D006252 2.7e-22 109.4 116 51.7
BcaC03g14225 Brassica carinata HOM05D002235 ORTHO05D006252 7.9e-22 107.8 103 53.4
SEGI_26152 Sequoiadendron giganteum HOM05D002235 ORTHO05D006252 1.3e-21 107.1 103 52.4
SalBow1G4279 Salvia bowleyana HOM05D002235 ORTHO05D006252 3.9e-21 105.5 97 54.6
SMO169G0123 Selaginella moellendorffii HOM05D002235 ORTHO05D006252 3.3e-20 102.4 101 52.5
Mapoly0005s0245 Marchantia polymorpha HOM05D002235 ORTHO05D006252 4.3e-20 102.1 114 49.1
AagrBONN_evm.TU.Sc2ySwM_368.1692 Anthoceros agrestis HOM05D002235 ORTHO05D006252 1.1e-18 97.4 74 64.9
CBR_g40529 Chara braunii HOM05D002235 ORTHO05D006252 3.5e-14 82.4 127 45.7
Lsat_1_v5_gn_5_33001 Lactuca sativa HOM05D002235 ORTHO05D006252 1.3e-13 80.5 69 55.1
Pp3s128_40 Physcomitrium patens HOM05D002235 ORTHO05D006252 1.3e-13 80.5 114 46.5
CARHR004650 Cardamine hirsuta HOM05D002235 ORTHO05D006252 6.7e-13 78.2 80 51.2
vmacro20205 Vaccinium macrocarpon HOM05D002235 ORTHO05D006252 2.5e-12 76.3 57 59.6
Medtr0316s0010 Medicago truncatula HOM05D002235 ORTHO05D006252 5.6e-12 75.1 52 69.2
HanXRQChr15g0479751 Helianthus annuus HOM05D002235 ORTHO05D225803 1.6e-11 73.6 57 63.2
Migut.A00837 Erythranthe guttata HOM05D000943 ORTHO05D007752 3.4e-09 65.9 115 37.4
C02p15280 Brassica napus HOM05D002235 ORTHO05D006252 3.8e-08 62.4 49 59.2
MCO03G488 Micromonas commoda HOM05D002235 ORTHO05D006252 1.1e-07 60.8 106 35.8
PRCOL_00003594 Prasinoderma coloniale HOM05D002235 ORTHO05D006252 1.9e-07 60.1 91 39.6
BraA02t05980Z Brassica rapa HOM05D002235 ORTHO05D006252 3.2e-07 59.3 49 57.1
Cre09.g415950 Chlamydomonas reinhardtii HOM05D002235 ORTHO05D006252 1.6e-06 57.0 74 47.3
Haze_27389 Corylus avellana HOM05D002235 ORTHO05D006252 2.7e-06 56.2 69 40.6
SMO347G0080 Selaginella moellendorffii HOM05D002235 ORTHO05D006252 3.5e-06 55.8 66 43.9
MSTRG.12057 Avicennia marina HOM05D000943 ORTHO05D007752 4.6e-06 55.5 90 40.0


User provided reference genes

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