Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0741 Fragaria x ananassa HOM05D001876 ORTHO05D019192 9.4e-191 670.2 390 100.0
FAN06G3562 Fragaria x ananassa HOM05D001876 ORTHO05D019192 6.5e-99 365.2 399 59.4
FAN06G0414 Fragaria x ananassa HOM05D001876 ORTHO05D019192 8.7e-96 354.8 375 60.8
FvH4_7g10420 Fragaria vesca HOM05D001876 ORTHO05D019192 2.0e-92 343.6 348 61.5
FAN10G1274 Fragaria x ananassa HOM05D030657 ORTHO05D019192 3.1e-85 319.7 337 59.9
FAN03G1210 Fragaria x ananassa HOM05D001876 ORTHO05D019192 1.1e-61 241.5 297 53.9
FvH4_3g41972 Fragaria vesca HOM05D001876 ORTHO05D002002 5.2e-40 169.5 310 43.5
FAN11G3885 Fragaria x ananassa HOM05D001876 ORTHO05D002002 3.0e-35 153.7 280 43.2
FAN25G1930 Fragaria x ananassa HOM05D001876 ORTHO05D002002 1.7e-30 137.9 608 30.1
FAN21G2243 Fragaria x ananassa HOM05D001876 ORTHO05D002002 3.7e-30 136.7 606 29.7
Nitab4.5_0000152g0190 Nicotiana tabacum HOM05D001876 ORTHO05D002002 7.8e-28 129.0 325 37.8
Nitab4.5_0001303g0100 Nicotiana tabacum HOM05D001876 ORTHO05D002002 1.7e-27 127.9 325 37.5
FAN10G0434 Fragaria x ananassa HOM05D030657 ORTHO05D019192 2.5e-26 124.0 70 91.4
RcHm_v2.0_Chr4g0407801 Rosa chinensis HOM05D000005 ORTHO05D000012 5.6e-26 122.9 283 39.2
Dinv06828 Davidia involucrata HOM05D001876 ORTHO05D002002 3.6e-25 120.2 277 37.5
VMungo0540G1408 Vigna mungo HOM05D001876 ORTHO05D002002 3.6e-25 120.2 326 34.4
FAN16G1749 Fragaria x ananassa HOM05D001876 ORTHO05D002002 4.7e-25 119.8 608 28.5
Duzib170G0551 Durio zibethinus HOM05D001876 ORTHO05D002002 8.1e-25 119.0 281 37.0
Hma1.2p1_0193F.1_g084140 Hydrangea macrophylla HOM05D001876 ORTHO05D002002 1.1e-24 118.6 283 37.8
Hma1.2p1_2995F.1_g331450 Hydrangea macrophylla HOM05D001876 ORTHO05D002002 1.1e-24 118.6 283 37.8
RcHm_v2.0_Chr5g0075171 Rosa chinensis HOM05D001876 ORTHO05D002002 1.1e-24 118.6 599 28.5
Atru.chr2.3845 Acer truncatum HOM05D001876 ORTHO05D002002 1.4e-24 118.2 275 37.8
Haze_09897 Corylus avellana HOM05D001876 ORTHO05D002002 1.8e-24 117.9 277 36.8
Rhsim06G0234000 Rhododendron simsii HOM05D001876 ORTHO05D002002 2.3e-24 117.5 198 42.4
Glyma.18G072400 Glycine max HOM05D001876 ORTHO05D002002 3.1e-24 117.1 326 34.7
Cpa.g.sc27.194 Carica papaya HOM05D001876 ORTHO05D002002 5.2e-24 116.3 329 34.7
arahy.Tifrunner.gnm1.ann1.LQ166S Arachis hypogaea HOM05D001876 ORTHO05D002002 8.9e-24 115.5 333 34.2
Peaxi162Scf00232g00036 Petunia axillaris HOM05D001876 ORTHO05D002002 1.2e-23 115.2 325 36.6
TAR627G0307 Trochodendron aralioides HOM05D001876 ORTHO05D002002 1.2e-23 115.2 277 36.8
Nn1g07691 Nelumbo nucifera HOM05D001876 ORTHO05D002002 1.5e-23 114.8 323 35.3
Sabra16G0318400 Salix brachista HOM05D001876 ORTHO05D002002 1.5e-23 114.8 277 37.2
FvH4_3g41980 Fragaria vesca HOM05D001876 ORTHO05D002002 3.4e-23 113.6 608 28.1
Cfa016942 Carpinus fangiana HOM05D001876 ORTHO05D002002 4.4e-23 113.2 276 36.6
Potri.016G002100 Populus trichocarpa HOM05D001876 ORTHO05D002002 5.8e-23 112.8 285 36.8
arahy.Tifrunner.gnm1.ann1.SQBY3A Arachis hypogaea HOM05D001876 ORTHO05D002002 1.3e-22 111.7 283 35.3
DCAR_017598 Daucus carota HOM05D001876 ORTHO05D002002 1.3e-22 111.7 226 38.9
CiPaw.10G084200 Carya illinoinensis HOM05D001876 ORTHO05D002002 2.9e-22 110.5 278 35.3
Peaxi162Scf00006g00717 Petunia axillaris HOM05D001876 ORTHO05D002002 2.9e-22 110.5 349 33.8
arahy.Tifrunner.gnm1.ann1.ADA7T8 Arachis hypogaea HOM05D001876 ORTHO05D002002 4.9e-22 109.8 333 33.9
Phvul.006G060500 Phaseolus vulgaris HOM05D001876 ORTHO05D002002 6.4e-22 109.4 325 33.2
Hund01842 Selenicereus undatus HOM05D001876 ORTHO05D002002 6.4e-22 109.4 223 39.5
TAR629G2148 Trochodendron aralioides HOM05D001876 ORTHO05D002002 8.3e-22 109.0 344 33.7
Lalb_Chr20g0115301 Lupinus albus HOM05D001876 ORTHO05D002002 1.1e-21 108.6 326 33.1
arahy.Tifrunner.gnm1.ann1.49CTIT Arachis hypogaea HOM05D001876 ORTHO05D002002 1.9e-21 107.8 192 40.6
Duzib213G0425 Durio zibethinus HOM05D001876 ORTHO05D002002 4.1e-21 106.7 333 32.7
Gorai.004G034200 Gossypium raimondii HOM05D001876 ORTHO05D002002 9.2e-21 105.5 278 37.1
TWI38G1429 Tripterygium wilfordii HOM05D001876 ORTHO05D002002 9.2e-21 105.5 354 31.1
Gohir.D08G036200 Gossypium hirsutum HOM05D001876 ORTHO05D002002 1.2e-20 105.1 278 37.1
TPR.G17949 Trifolium pratense HOM05D001876 ORTHO05D002002 4.6e-20 103.2 326 32.2
Potri.011G166400 Populus trichocarpa HOM05D001876 ORTHO05D002002 6.0e-20 102.8 232 38.8
Medtr3g061160 Medicago truncatula HOM05D001876 ORTHO05D002002 7.8e-20 102.4 326 31.9
TAR626G0018 Trochodendron aralioides HOM05D001876 ORTHO05D002002 1.3e-19 101.7 323 33.1
AUR62035638 Chenopodium quinoa HOM05D001876 ORTHO05D002002 2.3e-19 100.9 223 38.1
Lj6g0010416 Lotus japonicus HOM05D001876 ORTHO05D002002 2.3e-19 100.9 336 32.7
Gohir.A08G025700 Gossypium hirsutum HOM05D001876 ORTHO05D002002 3.0e-19 100.5 278 36.3
SHI21632 Sapria himalayana HOM05D001876 ORTHO05D002002 3.0e-19 100.5 154 42.9
Ca_14851_v3 Cicer arietinum L. HOM05D001876 ORTHO05D002002 6.6e-19 99.4 328 32.6
MBI15_g00880_MAGBIO Magnolia biondii HOM05D001876 ORTHO05D002002 8.6e-19 99.0 281 34.2
Dinv10376 Davidia involucrata HOM05D001876 ORTHO05D002002 1.9e-18 97.8 283 34.6
FAN25G2172 Fragaria x ananassa HOM05D001876 ORTHO05D002002 2.5e-18 97.4 168 47.0
MBI15_g35676_MAGBIO Magnolia biondii HOM05D001876 ORTHO05D002002 2.5e-18 97.4 333 30.9
RcHm_v2.0_Chr4g0389341 Rosa chinensis HOM05D001876 ORTHO05D002002 3.3e-18 97.1 156 47.4
Aa31LG10G500 Aethionema arabicum HOM05D001876 ORTHO05D002002 5.6e-18 96.3 136 41.9
Carub.0003s1268 Capsella rubella HOM05D001876 ORTHO05D002002 9.5e-18 95.5 206 38.3
THA.LOC104810297 Tarenaya hassleriana HOM05D001876 ORTHO05D002002 9.5e-18 95.5 321 31.8
AT3G13300 Arabidopsis thaliana HOM05D001876 ORTHO05D002002 1.2e-17 95.1 223 35.9
QL05p066377 Quercus lobata HOM05D001876 ORTHO05D002002 1.2e-17 95.1 277 33.2
Potri.001G469500 Populus trichocarpa HOM05D001876 ORTHO05D002002 2.1e-17 94.4 297 33.3
GSVIVG01014783001 Vitis vinifera HOM05D001876 ORTHO05D002002 3.6e-17 93.6 336 32.7
FAN03G1480 Fragaria x ananassa HOM05D013306 ORTHO05D035584 4.7e-17 93.2 302 33.1
PGR083G2540 Punica granatum HOM05D001876 ORTHO05D002002 6.2e-17 92.8 135 47.4
MBI11_g40896_MAGBIO Magnolia biondii HOM05D001876 ORTHO05D002002 8.1e-17 92.4 135 44.4
MBI15_g41024_MAGBIO Magnolia biondii HOM05D001876 ORTHO05D002002 8.1e-17 92.4 376 27.9
vmacro09608 Vaccinium macrocarpon HOM05D001876 ORTHO05D002002 8.1e-17 92.4 328 32.0
AL3G25120 Arabidopsis lyrata HOM05D001876 ORTHO05D002002 1.1e-16 92.0 223 35.0
CiPaw.09G112100 Carya illinoinensis HOM05D001876 ORTHO05D002002 1.1e-16 92.0 292 31.2
FAN21G1995 Fragaria x ananassa HOM05D001876 ORTHO05D002002 1.4e-16 91.7 77 71.4
Cfa000007 Carpinus fangiana HOM05D001876 ORTHO05D002002 1.8e-16 91.3 278 33.8
Haze_07052 Corylus avellana HOM05D001876 ORTHO05D002002 4.0e-16 90.1 289 33.6
RcHm_v2.0_Chr4g0389211 Rosa chinensis HOM05D001876 ORTHO05D019192 6.8e-16 89.4 76 67.1
Potri.006G001400 Populus trichocarpa HOM05D001876 ORTHO05D002002 8.9e-16 89.0 283 33.2
HanXRQChr11g0334581 Helianthus annuus HOM05D001876 ORTHO05D002002 1.5e-15 88.2 322 31.4
Sc07g0002250 Simmondsia chinensis HOM05D001876 ORTHO05D002002 2.0e-15 87.8 276 33.0
SGA_v2.0_scaffold42G15938 Striga asiatica HOM05D001876 ORTHO05D002002 5.8e-15 86.3 190 38.4
DCAR_013771 Daucus carota HOM05D001876 ORTHO05D002002 9.9e-15 85.5 324 30.9
CDE10G0783 Ceratophyllum demersum HOM05D001876 ORTHO05D002002 4.9e-14 83.2 228 34.6
RcHm_v2.0_Chr4g0386931 Rosa chinensis HOM05D001876 ORTHO05D002002 8.4e-14 82.4 137 46.7
GSVIVG01006976001 Vitis vinifera HOM05D001876 ORTHO05D002002 2.4e-13 80.9 237 32.5
HanXRQChr03g0077781 Helianthus annuus HOM05D001876 ORTHO05D002002 4.1e-13 80.1 275 30.9
AT3G13290 Arabidopsis thaliana HOM05D001876 ORTHO05D002002 5.4e-13 79.7 130 43.8
CDE10G0998 Ceratophyllum demersum HOM05D001876 ORTHO05D002002 5.4e-13 79.7 220 34.1
Rhsim04G0009400 Rhododendron simsii HOM05D001876 ORTHO05D002002 5.4e-13 79.7 227 34.8
SGA_v2.0_scaffold8G04429 Striga asiatica HOM05D001876 ORTHO05D002002 5.4e-13 79.7 226 33.6
Manes.05G206100 Manihot esculenta HOM05D001876 ORTHO05D002002 9.2e-13 79.0 278 31.7
THA.LOC104822709 Tarenaya hassleriana HOM05D001876 ORTHO05D002002 1.6e-12 78.2 224 32.6
A05p36310 Brassica napus HOM05D001876 ORTHO05D002002 2.7e-12 77.4 224 32.1
BraA05t22432Z Brassica rapa HOM05D001876 ORTHO05D002002 2.7e-12 77.4 224 32.1
Psat5g163240 Pisum sativum HOM05D001876 ORTHO05D002002 6.0e-12 76.3 328 27.7
Actinidia03661 Actinidia chinensis HOM05D001876 ORTHO05D002002 7.8e-12 75.9 285 31.9
FAN25G3337 Fragaria x ananassa HOM05D001876 ORTHO05D002002 7.8e-12 75.9 120 49.2
Glyma.08G337200 Glycine max HOM05D001876 ORTHO05D002002 1.7e-11 74.7 329 29.5
Gohir.A09G067700 Gossypium hirsutum HOM05D001876 ORTHO05D002002 1.7e-11 74.7 310 29.0
Thecc.07G005200 Theobroma cacao HOM05D001876 ORTHO05D002002 1.7e-11 74.7 281 30.2
HPP92_026159 Vanilla planifolia HOM05D001876 ORTHO05D002002 1.7e-11 74.7 108 41.7
Pp3c15_3440 Physcomitrium patens HOM05D001876 ORTHO05D002002 2.3e-11 74.3 136 37.5
Pp3c15_3450 Physcomitrium patens HOM05D001876 ORTHO05D002002 2.3e-11 74.3 136 37.5
Prupe.6G032100 Prunus persica HOM05D001876 ORTHO05D002002 2.3e-11 74.3 279 31.2
Lsat_1_v5_gn_7_116441 Lactuca sativa HOM05D001876 ORTHO05D002002 3.0e-11 73.9 226 31.9
BcaC05g29191 Brassica carinata HOM05D001876 ORTHO05D002002 3.9e-11 73.6 224 30.8
C05p54620 Brassica napus HOM05D001876 ORTHO05D002002 3.9e-11 73.6 224 30.8
BolC5t34127H Brassica oleracea HOM05D001876 ORTHO05D002002 3.9e-11 73.6 224 30.8
Actinidia10583 Actinidia chinensis HOM05D001876 ORTHO05D002002 5.1e-11 73.2 83 54.2
MBI14_g30654_MAGBIO Magnolia biondii HOM05D001876 ORTHO05D002002 5.1e-11 73.2 279 30.8
GSVIVG01037795001 Vitis vinifera HOM05D001876 ORTHO05D002002 6.6e-11 72.8 106 40.6
Gorai.006G081900 Gossypium raimondii HOM05D001876 ORTHO05D002002 8.6e-11 72.4 295 29.5
Sp3g11500 Schrenkiella parvula HOM05D001876 ORTHO05D002002 8.6e-11 72.4 323 28.2
Dinv04380 Davidia involucrata HOM05D001876 ORTHO05D002002 1.9e-10 71.2 260 31.9
Nn1g08429 Nelumbo nucifera HOM05D001876 ORTHO05D002002 2.5e-10 70.9 273 31.1
QL08p001531 Quercus lobata HOM05D001876 ORTHO05D002002 2.5e-10 70.9 327 30.9
Duzib235G0083 Durio zibethinus HOM05D001876 ORTHO05D002002 3.3e-10 70.5 310 28.1
FvH4_7g10090 Fragaria vesca HOM05D013306 ORTHO05D035584 4.3e-10 70.1 65 60.0
BcaC05g30231 Brassica carinata HOM05D001876 ORTHO05D002002 7.3e-10 69.3 216 32.4
Pp3c9_4880 Physcomitrium patens HOM05D001876 ORTHO05D002002 7.3e-10 69.3 148 35.1
ECA240G3156 Erigeron canadensis HOM05D001876 ORTHO05D002002 9.6e-10 68.9 333 29.4
Ah.14g085010 Amaranthus hybridus HOM05D001876 ORTHO05D002002 1.2e-09 68.6 207 31.4
Sopen07g034150 Solanum pennellii HOM05D001876 ORTHO05D002002 1.2e-09 68.6 338 29.3
FAN08G2706 Fragaria x ananassa HOM05D013306 ORTHO05D046474 2.1e-09 67.8 57 68.4
FAN06G0659 Fragaria x ananassa HOM05D001876 ORTHO05D035584 2.8e-09 67.4 65 58.5
Lalb_Chr15g0088371 Lupinus albus HOM05D001876 ORTHO05D002002 2.8e-09 67.4 136 36.0
FAN21G3992 Fragaria x ananassa HOM05D001876 ORTHO05D002002 4.7e-09 66.6 241 32.4
arahy.Tifrunner.gnm1.ann1.EXSC1B Arachis hypogaea HOM05D001876 ORTHO05D002002 8.1e-09 65.9 276 29.0
arahy.Tifrunner.gnm1.ann1.M7DLA2 Arachis hypogaea HOM05D001876 ORTHO05D002002 1.1e-08 65.5 276 29.0
FvH4_5g06810 Fragaria vesca HOM05D013306 ORTHO05D046474 1.1e-08 65.5 238 32.4
TWI63G1743 Tripterygium wilfordii HOM05D001876 ORTHO05D002002 2.4e-08 64.3 274 29.6
Aqoxy7G01305 Aquilegia oxysepala HOM05D001876 ORTHO05D002002 4.0e-08 63.5 88 46.6
Sed0006897 Sechium edule HOM05D001876 ORTHO05D002002 5.2e-08 63.2 330 27.0
FAN11G3414 Fragaria x ananassa HOM05D001876 ORTHO05D002002 1.5e-07 61.6 248 31.0
TWI39G0122 Tripterygium wilfordii HOM05D001876 ORTHO05D002002 2.0e-07 61.2 316 29.1
Mapoly0037s0026 Marchantia polymorpha HOM05D001876 ORTHO05D002002 2.6e-07 60.8 159 32.1
Pp3c3_2660 Physcomitrium patens HOM05D001876 ORTHO05D002002 2.6e-07 60.8 287 25.8
Sc20g0000100 Simmondsia chinensis HOM05D001876 ORTHO05D002002 3.4e-07 60.5 311 27.7
CiPaw.12G141800 Carya illinoinensis HOM05D001876 ORTHO05D002002 5.8e-07 59.7 336 29.2
COL.COLO4_31961 Corchorus olitorius HOM05D001876 ORTHO05D002002 5.8e-07 59.7 277 28.9
MSTRG.14512 Avicennia marina HOM05D001876 ORTHO05D002002 1.3e-06 58.5 276 30.1
Sopen10g001880 Solanum pennellii HOM05D001876 ORTHO05D002002 2.2e-06 57.8 221 29.9
FvH4_4g01920 Fragaria vesca HOM05D065299 ORTHO05D196952 2.9e-06 57.4 126 42.1
Pp3c7_25280 Physcomitrium patens HOM05D001876 ORTHO05D002002 2.9e-06 57.4 168 25.6
Actinidia30365 Actinidia chinensis HOM05D001876 ORTHO05D002002 3.8e-06 57.0 73 42.5
Dinv40896 Davidia involucrata HOM05D001876 ORTHO05D002002 8.4e-06 55.8 175 28.6
Glyma.15G122400 Glycine max HOM05D001876 ORTHO05D002002 8.4e-06 55.8 221 29.4
Manes.08G015400 Manihot esculenta HOM05D001876 ORTHO05D002002 8.4e-06 55.8 137 35.8


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