Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02026 Eucalyptus grandis HOM05D003925 ORTHO05D004832 2.3e-168 595.5 307 100.0
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 2.9e-139 498.8 317 83.9
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 1.9e-138 496.1 317 83.6
PGR142G2211 Punica granatum HOM05D003925 ORTHO05D004832 1.8e-136 489.6 317 79.2
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 5.2e-136 488.0 316 79.7
Manes.07G023200 Manihot esculenta HOM05D003925 ORTHO05D004832 1.5e-135 486.5 318 79.2
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 1.5e-135 486.5 320 78.4
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 3.7e-134 481.9 317 78.5
Duzib052G0643 Durio zibethinus HOM05D003925 ORTHO05D004832 3.2e-133 478.8 317 77.9
Cpa.g.sc30.25 Carica papaya HOM05D003925 ORTHO05D004832 7.0e-133 477.6 317 78.9
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 1.6e-132 476.5 314 78.0
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 1.6e-132 476.5 315 78.4
SGA_v2.0_scaffold42G15910 Striga asiatica HOM05D003925 ORTHO05D004832 1.6e-132 476.5 317 76.3
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 6.6e-131 471.1 320 76.6
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 8.6e-131 470.7 317 75.1
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 8.6e-131 470.7 320 76.6
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 1.9e-130 469.5 312 76.6
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.5e-130 469.2 314 77.1
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 2.5e-130 469.2 317 75.1
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 2.5e-130 469.2 315 77.8
CAN.G798.55 Capsicum annuum HOM05D003925 ORTHO05D004832 3.3e-130 468.8 315 75.9
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 7.3e-130 467.6 314 77.1
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 9.5e-130 467.2 317 76.7
Manes.10G119400 Manihot esculenta HOM05D003925 ORTHO05D004832 1.2e-129 466.8 318 76.1
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 1.6e-129 466.5 319 75.5
DCAR_006681 Daucus carota HOM05D003925 ORTHO05D004832 1.6e-129 466.5 317 74.1
Hma1.2p1_0884F.1_g232530 Hydrangea macrophylla HOM05D003925 ORTHO05D004832 1.6e-129 466.5 318 76.4
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 2.8e-129 465.7 316 75.6
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 2.8e-129 465.7 317 77.6
MSTRG.16495 Avicennia marina HOM05D003925 ORTHO05D004832 4.7e-129 464.9 308 77.3
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 6.2e-129 464.5 315 75.9
MSTRG.5212 Avicennia marina HOM05D003925 ORTHO05D004832 1.0e-128 463.8 317 75.4
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.0e-128 463.8 317 74.4
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 2.3e-128 462.6 314 74.8
Lsat_1_v5_gn_9_121141 Lactuca sativa HOM05D003925 ORTHO05D004832 2.3e-128 462.6 313 76.0
Sed0019914 Sechium edule HOM05D003925 ORTHO05D004832 2.3e-128 462.6 313 74.1
PGSC0003DMG400024923 Solanum tuberosum HOM05D003925 ORTHO05D004832 2.3e-128 462.6 313 75.1
Thecc.02G024000 Theobroma cacao HOM05D003925 ORTHO05D004832 3.1e-128 462.2 316 75.3
Actinidia00183 Actinidia chinensis HOM05D003925 ORTHO05D004832 5.2e-128 461.5 319 74.6
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 6.8e-128 461.1 316 75.9
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 3.4e-127 458.8 316 72.8
Aa31LG4G9470 Aethionema arabicum HOM05D003925 ORTHO05D004832 7.5e-127 457.6 316 72.2
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 7.5e-127 457.6 317 74.1
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 9.8e-127 457.2 318 74.2
Carub.0007s1672 Capsella rubella HOM05D003925 ORTHO05D004832 1.7e-126 456.4 316 72.2
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 1.7e-126 456.4 317 75.4
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 2.2e-126 456.1 316 74.4
Aqoxy5G03033 Aquilegia oxysepala HOM05D003925 ORTHO05D004832 3.7e-126 455.3 317 74.1
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 6.4e-126 454.5 312 76.0
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 1.1e-125 453.8 317 74.1
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 1.1e-125 453.8 317 74.1
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 1.1e-125 453.8 357 67.2
CARHR231760 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.4e-125 453.4 316 71.5
SalBow3G3816 Salvia bowleyana HOM05D003925 ORTHO05D004832 4.1e-125 451.8 317 72.9
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 5.4e-125 451.4 317 73.5
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 1.2e-124 450.3 316 73.4
Oeu023407.1 Olea europaea HOM05D003925 ORTHO05D004832 2.0e-124 449.5 317 72.2
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 2.7e-124 449.1 316 72.8
EL10Ac6g14144 Beta vulgaris HOM05D003925 ORTHO05D004832 3.5e-124 448.7 315 73.0
vmacro19868 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 3.5e-124 448.7 317 73.5
Peaxi162Scf00011g00941 Petunia axillaris HOM05D003925 ORTHO05D004832 6.0e-124 448.0 315 74.0
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 1.0e-123 447.2 317 74.8
Glyma.12G167500 Glycine max HOM05D003925 ORTHO05D004832 1.0e-123 447.2 317 73.5
Phvul.006G218500 Phaseolus vulgaris HOM05D003925 ORTHO05D004832 1.3e-123 446.8 313 73.2
Actinidia06473 Actinidia chinensis HOM05D003925 ORTHO05D004832 2.3e-123 446.0 318 72.6
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 2.3e-123 446.0 317 71.3
CANSAT54G0877 Cannabis sativa HOM05D003925 ORTHO05D004832 3.0e-123 445.7 317 73.2
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 3.0e-123 445.7 317 71.9
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 3.0e-123 445.7 317 74.1
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 3.9e-123 445.3 317 71.9
TPR.G2147 Trifolium pratense HOM05D003925 ORTHO05D004832 6.6e-123 444.5 314 71.3
Nitab4.5_0000948g0030 Nicotiana tabacum HOM05D003925 ORTHO05D004832 3.3e-122 442.2 315 72.7
Nitab4.5_0002596g0090 Nicotiana tabacum HOM05D003925 ORTHO05D004832 5.6e-122 441.4 315 72.7
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 9.5e-122 440.7 271 80.1
ECA240G1679 Erigeron canadensis HOM05D003925 ORTHO05D004832 6.2e-121 438.0 313 71.6
Medtr2g005930 Medicago truncatula HOM05D003925 ORTHO05D004832 8.1e-121 437.6 314 70.4
Psat1g223280 Pisum sativum HOM05D003925 ORTHO05D004832 2.3e-120 436.0 313 70.6
Solyc01g103680.3 Solanum lycopersicum HOM05D003925 ORTHO05D004832 2.3e-120 436.0 313 71.6
HanXRQChr06g0181341 Helianthus annuus HOM05D003925 ORTHO05D004832 4.0e-120 435.3 314 71.3
Sopen01g046090 Solanum pennellii HOM05D003925 ORTHO05D004832 5.2e-120 434.9 313 71.2
THA.LOC104800040 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 8.9e-120 434.1 317 71.0
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 1.5e-119 433.3 318 71.7
VMungo0540G0371 Vigna mungo HOM05D003925 ORTHO05D004832 1.5e-119 433.3 313 71.9
CiPaw.05G005700 Carya illinoinensis HOM05D003925 ORTHO05D004832 2.0e-119 433.0 318 71.7
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 2.6e-119 432.6 331 70.4
CiPaw.06G173300 Carya illinoinensis HOM05D003925 ORTHO05D004832 3.4e-119 432.2 318 72.0
Glyma.16G003600 Glycine max HOM05D003925 ORTHO05D004832 3.4e-119 432.2 324 69.8
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 3.4e-119 432.2 329 69.3
ClCG10G007000 Citrullus lanatus HOM05D003925 ORTHO05D004832 9.8e-119 430.6 313 70.6
CDE08G0951 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 1.3e-118 430.3 316 70.6
Atru.chr6.781 Acer truncatum HOM05D003925 ORTHO05D004832 2.2e-118 429.5 314 70.7
Atru.chr6.812 Acer truncatum HOM05D003925 ORTHO05D004832 2.2e-118 429.5 314 70.7
MELO3C016507.2 Cucumis melo HOM05D003925 ORTHO05D004832 3.7e-118 428.7 313 71.9
HanXRQChr16g0509421 Helianthus annuus HOM05D003925 ORTHO05D004832 3.7e-118 428.7 329 67.2
Gohir.A01G182900 Gossypium hirsutum HOM05D003925 ORTHO05D004832 8.3e-118 427.6 317 70.3
Lalb_Chr15g0090731 Lupinus albus HOM05D003925 ORTHO05D004832 1.4e-117 426.8 316 70.6
BraA03t11971Z Brassica rapa HOM05D003925 ORTHO05D004832 1.9e-117 426.4 315 68.3
Sp6g11590 Schrenkiella parvula HOM05D003925 ORTHO05D004832 9.2e-117 424.1 314 67.8
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 7.8e-116 421.0 314 69.4
CsaV3_3G006350 Cucumis sativus L. HOM05D003925 ORTHO05D004832 7.8e-116 421.0 313 70.6
Lj6g0026503 Lotus japonicus HOM05D003925 ORTHO05D004832 7.8e-116 421.0 314 67.8
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 1.3e-115 420.2 314 69.4
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 1.3e-115 420.2 316 67.7
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 2.3e-115 419.5 314 69.1
BolC7t45848H Brassica oleracea HOM05D003925 ORTHO05D004832 3.9e-115 418.7 313 67.4
BcaC06g32885 Brassica carinata HOM05D003925 ORTHO05D004832 5.1e-115 418.3 313 67.4
AL7G28890 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 6.6e-115 417.9 316 67.1
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 6.6e-115 417.9 314 68.8
Potri.004G223000 Populus trichocarpa HOM05D003925 ORTHO05D004832 6.6e-115 417.9 318 69.5
ATR0584G077 Amborella trichopoda HOM05D003925 ORTHO05D004832 8.6e-115 417.5 316 68.0
A03p55280 Brassica napus HOM05D003925 ORTHO05D004832 8.6e-115 417.5 313 67.7
BraA03t14587Z Brassica rapa HOM05D003925 ORTHO05D004832 8.6e-115 417.5 313 67.7
PSO170G6240 Papaver somniferum HOM05D003925 ORTHO05D004832 1.1e-114 417.2 314 68.5
AT4G24330 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 2.5e-114 416.0 316 66.5
Zm00001eb289240 Zea mays HOM05D003925 ORTHO05D004832 4.3e-114 415.2 312 68.6
C07p53570 Brassica napus HOM05D003925 ORTHO05D004832 1.2e-113 413.7 313 66.5
Sabra01G0168900 Salix brachista HOM05D003925 ORTHO05D004832 1.2e-113 413.7 318 67.9
Aa31LG3G6740 Aethionema arabicum HOM05D003925 ORTHO05D004832 1.8e-112 409.8 317 65.9
BcaC01g04841 Brassica carinata HOM05D003925 ORTHO05D004832 2.3e-112 409.5 315 66.7
vmacro01723 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 3.1e-112 409.1 313 66.1
SEGI_07809 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 6.8e-112 407.9 317 63.7
Zm00001eb348650 Zea mays HOM05D003925 ORTHO05D004832 1.2e-111 407.1 310 67.1
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 3.4e-111 405.6 319 65.8
PSO782G4904 Papaver somniferum HOM05D003925 ORTHO05D004832 4.4e-111 405.2 314 66.6
BcaB01g02930 Brassica carinata HOM05D003925 ORTHO05D004832 2.2e-110 402.9 315 65.4
arahy.Tifrunner.gnm1.ann1.0HG9JC Arachis hypogaea HOM05D003925 ORTHO05D004832 3.7e-110 402.1 313 66.1
Carub.0008s0983 Capsella rubella HOM05D003925 ORTHO05D004832 1.9e-109 399.8 314 64.3
BolC3t15651H Brassica oleracea HOM05D003925 ORTHO05D004832 2.4e-109 399.4 315 65.1
AL8G23900 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 3.2e-109 399.1 314 65.0
C03p33290 Brassica napus HOM05D003925 ORTHO05D004832 5.4e-109 398.3 315 64.8
MBI09_g03430_MAGBIO Magnolia biondii HOM05D003925 ORTHO05D004832 1.6e-108 396.7 316 66.1
A03p27580 Brassica napus HOM05D003925 ORTHO05D004832 2.1e-108 396.4 315 64.1
Thhalv10013427m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 1.0e-107 394.0 315 63.8
AT5G49945 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 3.9e-107 392.1 314 64.0
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.5e-106 390.2 251 74.9
Lj9C300G1 Lonicera japonica HOM05D003925 ORTHO05D004832 4.3e-106 388.7 351 61.0
arahy.Tifrunner.gnm1.ann1.D6FTCL Arachis hypogaea HOM05D003925 ORTHO05D004832 1.2e-105 387.1 339 61.1
Ca_00045_v3 Cicer arietinum L. HOM05D003925 ORTHO05D004832 5.2e-104 381.7 314 65.0
HPP92_013757 Vanilla planifolia HOM05D003925 ORTHO05D004832 1.2e-103 380.6 319 62.7
CARHR258770 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.7e-102 376.7 314 62.4
CARHR231750 Cardamine hirsuta HOM05D003925 ORTHO05D004832 2.2e-102 376.3 264 69.7
CSS0030901 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.9e-102 375.9 230 80.0
SGA_v2.0_scaffold8G04435 Striga asiatica HOM05D003925 ORTHO05D004832 2.9e-102 375.9 230 78.3
CDE06G0202 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 1.9e-101 373.2 297 65.7
Os05g0432400 Oryza sativa ssp. japonica HOM05D003925 ORTHO05D004832 1.6e-100 370.2 312 62.5
Mapoly0037s0012 Marchantia polymorpha HOM05D003925 ORTHO05D004832 1.9e-90 336.7 314 57.0
SMO356G0110 Selaginella moellendorffii HOM05D003925 ORTHO05D004832 3.3e-90 335.9 317 54.6
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 6.2e-89 331.6 277 64.6
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 2.2e-86 323.2 270 65.2
Pp3c5_6620 Physcomitrium patens HOM05D003925 ORTHO05D004832 1.3e-81 307.4 308 50.3
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 1.0e-67 261.2 192 72.9
SEGI_11230 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 5.1e-67 258.8 171 70.2
GSVIVG01023266001 Vitis vinifera HOM05D003925 ORTHO05D004832 9.1e-56 221.5 195 65.6
AagrBONN_evm.TU.Sc2ySwM_362.431 Anthoceros agrestis HOM05D003925 ORTHO05D004832 3.6e-52 209.5 174 58.0
CBR_g4722 Chara braunii HOM05D003925 ORTHO05D004832 2.3e-51 206.8 345 38.0
SHI34757 Sapria himalayana HOM05D003925 ORTHO05D004832 4.7e-44 182.6 184 53.3
BcaC01g04842 Brassica carinata HOM05D003925 ORTHO05D004832 1.3e-41 174.5 138 62.3
CSS0013131 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 9.1e-40 168.3 137 68.6
CAN.G697.8 Capsicum annuum HOM05D003925 ORTHO05D004832 1.6e-39 167.5 117 66.7
CSS0019842 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.5e-37 160.2 129 69.0
Migut.B00784 Erythranthe guttata HOM05D003925 ORTHO05D004832 4.7e-36 156.0 129 66.7
SEGI_10393 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 1.8e-35 154.1 147 55.8
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 1.3e-33 147.9 145 60.7
Lalb_Chr20g0123671 Lupinus albus HOM05D003925 ORTHO05D004832 1.3e-33 147.9 99 71.7
Lj6g0024462 Lotus japonicus HOM05D003925 ORTHO05D004832 8.0e-28 128.6 305 34.1
Cre02.g106300 Chlamydomonas reinhardtii HOM05D003925 ORTHO05D004832 1.8e-27 127.5 320 33.8
CARHR216310 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.5e-26 124.4 99 61.6
MCO13G620 Micromonas commoda HOM05D003925 ORTHO05D004832 1.6e-20 104.4 325 27.7
CAN.G386.33 Capsicum annuum HOM05D003925 ORTHO05D004832 1.8e-16 90.9 70 51.4
AL3G33580 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 3.0e-14 83.6 134 39.6
CAN.G963.3 Capsicum annuum HOM05D003925 ORTHO05D004832 5.6e-13 79.3 47 74.5
Zm00001eb254380 Zea mays HOM05D002934 ORTHO05D004560 2.8e-12 77.0 54 63.0
Zm00001eb276420 Zea mays HOM05D002934 ORTHO05D004560 2.8e-12 77.0 54 63.0
BolC8t48574H Brassica oleracea HOM05D003925 ORTHO05D004832 5.8e-10 69.3 102 46.1
Thecc.02G021600 Theobroma cacao HOM05D003925 ORTHO05D004832 1.4e-08 64.7 53 64.2


User provided reference genes

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