Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00806 Eucalyptus grandis HOM05D007082 ORTHO05D008895 5.5e-74 280.8 135 100.0
Eucgr.H01429 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.3e-62 243.0 160 76.2
Eucgr.H01435 Eucalyptus grandis HOM05D007082 ORTHO05D008895 2.0e-60 235.7 160 74.4
Eucgr.H01442 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.1e-58 229.9 154 74.0
Eucgr.H01418 Eucalyptus grandis HOM05D007082 ORTHO05D008895 6.2e-57 224.2 152 73.7
PGR119G0159 Punica granatum HOM05D007082 ORTHO05D008895 1.1e-40 170.2 157 56.1
TWI12G0539 Tripterygium wilfordii HOM05D007082 ORTHO05D008895 6.4e-38 161.0 158 53.2
CANSAT25G2376 Cannabis sativa HOM05D007082 ORTHO05D008895 1.6e-36 156.4 154 50.0
MSTRG.18253 Avicennia marina HOM05D007082 ORTHO05D008895 4.6e-36 154.8 148 48.0
Ciclev10022619m.g Citrus clementina HOM05D007082 ORTHO05D008895 1.0e-35 153.7 154 50.0
Lj2P1167T48 Lonicera japonica HOM05D007082 ORTHO05D008895 1.3e-35 153.3 146 49.3
Manes.01G205300 Manihot esculenta HOM05D007082 ORTHO05D008895 1.7e-35 152.9 158 50.6
arahy.Tifrunner.gnm1.ann1.4F6QX0 Arachis hypogaea HOM05D007082 ORTHO05D008895 2.3e-35 152.5 152 50.7
SalBow4G2456 Salvia bowleyana HOM05D007082 ORTHO05D008895 2.3e-35 152.5 148 48.0
arahy.Tifrunner.gnm1.ann1.CZ80LA Arachis hypogaea HOM05D007082 ORTHO05D008895 5.1e-35 151.4 151 51.0
Haze_10047 Corylus avellana HOM05D007082 ORTHO05D008895 5.1e-35 151.4 150 51.3
CSS0021912 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 8.6e-35 150.6 148 50.7
CSS0029740 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 8.6e-35 150.6 148 50.7
CiPaw.07G089100 Carya illinoinensis HOM05D007082 ORTHO05D008895 8.6e-35 150.6 150 51.3
Haze_04674 Corylus avellana HOM05D007082 ORTHO05D008895 8.6e-35 150.6 150 50.7
Dinv32900 Davidia involucrata HOM05D007082 ORTHO05D008895 2.5e-34 149.1 145 49.7
Thecc.05G027700 Theobroma cacao HOM05D007082 ORTHO05D008895 2.5e-34 149.1 153 47.1
Atru.chr5.1487 Acer truncatum HOM05D000296 ORTHO05D000175 3.3e-34 148.7 155 50.3
Cfa004492 Carpinus fangiana HOM05D007082 ORTHO05D008895 3.3e-34 148.7 150 51.3
Potri.005G212900 Populus trichocarpa HOM05D007082 ORTHO05D008895 4.3e-34 148.3 158 46.2
CAN.G410.16 Capsicum annuum HOM05D007082 ORTHO05D008895 5.6e-34 147.9 149 47.0
Oeu025749.1 Olea europaea HOM05D007082 ORTHO05D008895 7.3e-34 147.5 148 47.3
Haze_10052 Corylus avellana HOM05D007082 ORTHO05D008895 9.6e-34 147.1 150 50.0
vmacro14749 Vaccinium macrocarpon HOM05D007082 ORTHO05D008895 9.6e-34 147.1 144 52.1
COL.COLO4_14680 Corchorus olitorius HOM05D007082 ORTHO05D008895 1.6e-33 146.4 152 48.0
Migut.D00329 Erythranthe guttata HOM05D007082 ORTHO05D008895 2.8e-33 145.6 156 45.5
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 2.8e-33 145.6 159 47.2
Rhsim13G0027400 Rhododendron simsii HOM05D007082 ORTHO05D008895 2.8e-33 145.6 151 49.0
Duzib128G1180 Durio zibethinus HOM05D007082 ORTHO05D008895 3.6e-33 145.2 153 46.4
HanXRQChr05g0154391 Helianthus annuus HOM05D007082 ORTHO05D008895 3.6e-33 145.2 154 46.1
MD03G1260600 Malus domestica HOM05D007082 ORTHO05D008895 4.7e-33 144.8 157 47.1
SGA_v2.0_scaffold1G00512 Striga asiatica HOM05D007082 ORTHO05D008895 1.4e-32 143.3 157 46.5
Psat6g025560 Pisum sativum HOM05D007082 ORTHO05D008895 1.8e-32 142.9 152 45.4
Lalb_Chr10g0095561 Lupinus albus HOM05D007082 ORTHO05D008895 4.0e-32 141.7 147 49.7
Nitab4.5_0016351g0010 Nicotiana tabacum HOM05D007082 ORTHO05D008895 4.0e-32 141.7 148 45.3
RcHm_v2.0_Chr6g0290411 Rosa chinensis HOM05D007082 ORTHO05D008895 4.0e-32 141.7 149 45.0
SGA_v2.0_scaffold12G06137 Striga asiatica HOM05D003153 ORTHO05D008895 4.0e-32 141.7 156 46.8
TAR622G1184 Trochodendron aralioides HOM05D007082 ORTHO05D008895 4.0e-32 141.7 146 48.6
Lj2g0002316 Lotus japonicus HOM05D007082 ORTHO05D008895 6.9e-32 141.0 155 46.5
Medtr1g033230 Medicago truncatula HOM05D007082 ORTHO05D008895 8.9e-32 140.6 154 46.1
Hund09516 Selenicereus undatus HOM05D007082 ORTHO05D008895 8.9e-32 140.6 155 47.1
THA.LOC104800748 Tarenaya hassleriana HOM05D007082 ORTHO05D008895 8.9e-32 140.6 154 48.1
TPR.G34570 Trifolium pratense HOM05D007082 ORTHO05D008895 1.2e-31 140.2 154 44.8
Sopen01g035010 Solanum pennellii HOM05D007082 ORTHO05D008895 1.5e-31 139.8 148 44.6
ClCG07G000420 Citrullus lanatus HOM05D007082 ORTHO05D008895 2.0e-31 139.4 155 49.0
MELO3C014298.2 Cucumis melo HOM05D007082 ORTHO05D008895 3.4e-31 138.7 152 49.3
CsaV3_2G013600 Cucumis sativus L. HOM05D007082 ORTHO05D008895 3.4e-31 138.7 152 48.0
Medtr5g020430 Medicago truncatula HOM05D007082 ORTHO05D008895 3.4e-31 138.7 154 45.5
Cc01_g19180 Coffea canephora HOM05D007082 ORTHO05D008895 4.4e-31 138.3 146 43.8
DCAR_002714 Daucus carota HOM05D007082 ORTHO05D008895 4.4e-31 138.3 156 44.2
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 5.8e-31 137.9 152 44.7
FvH4_2g23151 Fragaria vesca HOM05D007082 ORTHO05D008895 9.9e-31 137.1 152 43.4
FAN20G2212 Fragaria x ananassa HOM05D007082 ORTHO05D008895 9.9e-31 137.1 152 42.8
QL12p020738 Quercus lobata HOM05D007082 ORTHO05D008895 2.2e-30 136.0 150 46.0
Lsat_1_v5_gn_9_86820 Lactuca sativa HOM05D007082 ORTHO05D008895 4.9e-30 134.8 153 44.4
Aa31LG5G6620 Aethionema arabicum HOM05D007082 ORTHO05D008895 8.4e-30 134.0 154 44.8
Sed0015110 Sechium edule HOM05D007082 ORTHO05D008895 1.1e-29 133.7 159 44.7
VMungo1215G3041 Vigna mungo HOM05D007082 ORTHO05D008895 1.1e-29 133.7 149 45.6
Ah.11g050380 Amaranthus hybridus HOM05D007082 ORTHO05D008895 1.9e-29 132.9 154 44.8
Sc05g0001390 Simmondsia chinensis HOM05D007082 ORTHO05D008895 2.4e-29 132.5 149 43.6
Nn5g27058 Nelumbo nucifera HOM05D007082 ORTHO05D008895 4.2e-29 131.7 147 47.6
Psat6g050280 Pisum sativum HOM05D007082 ORTHO05D008895 4.2e-29 131.7 154 44.2
Glyma.08G176000 Glycine max HOM05D007082 ORTHO05D008895 2.1e-28 129.4 149 45.0
Lsat_1_v5_gn_9_6120 Lactuca sativa HOM05D007082 ORTHO05D008895 2.1e-28 129.4 146 44.5
SHI10976 Sapria himalayana HOM05D007082 ORTHO05D008895 7.8e-28 127.5 155 41.9
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 1.3e-27 126.7 153 45.1
MBI19_g34822_MAGBIO Magnolia biondii HOM05D007082 ORTHO05D008895 1.7e-27 126.3 149 42.3
PSO832G2607 Papaver somniferum HOM05D007082 ORTHO05D008895 1.7e-27 126.3 153 42.5
Cpa.g.sc41.65 Carica papaya HOM05D007082 ORTHO05D008895 2.3e-27 125.9 141 43.3
Gorai.001G088200 Gossypium raimondii HOM05D007082 ORTHO05D008895 2.3e-27 125.9 151 40.4
SEGI_21621 Sequoiadendron giganteum HOM05D007082 ORTHO05D008895 2.3e-27 125.9 159 44.7
PSO210G1980 Papaver somniferum HOM05D007082 ORTHO05D008895 3.0e-27 125.6 153 42.5
CARHR006820 Cardamine hirsuta HOM05D007082 ORTHO05D008895 3.9e-27 125.2 155 41.9
AUR62011993 Chenopodium quinoa HOM05D007082 ORTHO05D008895 5.1e-27 124.8 133 48.1
Gohir.D07G082600 Gossypium hirsutum HOM05D007082 ORTHO05D008895 5.1e-27 124.8 151 40.4
AL1G17250 Arabidopsis lyrata HOM05D007082 ORTHO05D008895 1.1e-26 123.6 155 41.3
AUR62032313 Chenopodium quinoa HOM05D007082 ORTHO05D008895 1.5e-26 123.2 133 48.1
AT1G07130 Arabidopsis thaliana HOM05D007082 ORTHO05D008895 3.3e-26 122.1 155 40.6
Sp1g05880 Schrenkiella parvula HOM05D007082 ORTHO05D008895 5.6e-26 121.3 155 41.3
Zm00001eb394240 Zea mays HOM05D007082 ORTHO05D008895 9.6e-26 120.6 158 41.8
ECA247G0055 Erigeron canadensis HOM05D007082 ORTHO05D008895 1.3e-25 120.2 118 44.9
Os03g0366900 Oryza sativa ssp. japonica HOM05D007082 ORTHO05D008895 1.6e-25 119.8 158 41.8
CDE05G2411 Ceratophyllum demersum HOM05D007082 ORTHO05D008895 2.8e-25 119.0 145 42.1
Gohir.A07G077800 Gossypium hirsutum HOM05D007082 ORTHO05D008895 2.8e-25 119.0 138 42.8
HanXRQChr16g0516211 Helianthus annuus HOM05D007082 ORTHO05D008895 1.4e-24 116.7 141 42.6
Phvul.003G015400 Phaseolus vulgaris HOM05D007082 ORTHO05D008895 1.4e-24 116.7 143 43.4
EL10Ac5g10526 Beta vulgaris HOM05D007082 ORTHO05D008895 5.3e-24 114.8 154 37.0
BolC8t47089H Brassica oleracea HOM05D007082 ORTHO05D008895 5.3e-24 114.8 155 39.4
A08p35770 Brassica napus HOM05D007082 ORTHO05D008895 6.9e-24 114.4 155 38.7
BraA08t35483Z Brassica rapa HOM05D007082 ORTHO05D008895 6.9e-24 114.4 155 38.7
Carub.0001s0641 Capsella rubella HOM05D007082 ORTHO05D008895 9.0e-24 114.0 155 39.4
Thhalv10008979m.g Eutrema salsugineum HOM05D007082 ORTHO05D008895 1.2e-23 113.6 155 39.4
C08p02920 Brassica napus HOM05D007082 ORTHO05D008895 2.0e-23 112.8 155 38.7
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 9.9e-23 110.5 148 36.5
BolC8t47080H Brassica oleracea HOM05D007082 ORTHO05D008895 2.2e-22 109.4 155 37.4
BcaB03g13405 Brassica carinata HOM05D007082 ORTHO05D008895 1.1e-21 107.1 154 37.7
Mapoly0041s0121 Marchantia polymorpha HOM05D007082 ORTHO05D008895 1.9e-21 106.3 154 37.7
Pp3c1_6180 Physcomitrium patens HOM05D007082 ORTHO05D008895 3.2e-21 105.5 150 37.3
C08p02850 Brassica napus HOM05D007082 ORTHO05D008895 3.5e-20 102.1 168 34.5
Medtr5g020340 Medicago truncatula HOM05D000096 ORTHO05D008895 3.0e-19 99.0 119 43.7
ATR0580G091 Amborella trichopoda HOM05D007082 ORTHO05D008895 8.7e-19 97.4 144 41.7
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 8.7e-19 97.4 131 42.7
AagrBONN_evm.TU.Sc2ySwM_117.1416 Anthoceros agrestis HOM05D007082 ORTHO05D008895 2.0e-15 86.3 148 31.1
Lj3g0026065 Lotus japonicus HOM05D007082 ORTHO05D008895 5.8e-15 84.7 90 43.3
MD15G1065600 Malus domestica HOM05D007082 ORTHO05D008895 7.6e-15 84.3 89 46.1
Aqoxy5G02465 Aquilegia oxysepala HOM05D007082 ORTHO05D008895 2.1e-12 76.3 138 36.2
Actinidia09115 Actinidia chinensis HOM05D007082 ORTHO05D008895 3.7e-09 65.5 45 60.0
SMO307G0023 Selaginella moellendorffii HOM05D007082 ORTHO05D008895 2.0e-07 59.7 87 35.6
Sc05g0001360 Simmondsia chinensis HOM05D007082 ORTHO05D008895 2.0e-07 59.7 119 35.3


User provided reference genes

Program Settings