Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01239 Eucalyptus grandis HOM05D006642 ORTHO05D008856 9.1e-182 641.0 583 100.0
PGR142G3441 Punica granatum HOM05D006642 ORTHO05D008856 8.1e-114 415.2 334 80.2
Atru.chr6.2750 Acer truncatum HOM05D006642 ORTHO05D008856 3.1e-113 413.3 334 80.2
Ciclev10014674m.g Citrus clementina HOM05D006642 ORTHO05D008856 2.9e-111 406.8 334 79.6
Cfa023538 Carpinus fangiana HOM05D006642 ORTHO05D008856 1.2e-109 401.4 335 78.5
MD09G1145700 Malus domestica HOM05D006642 ORTHO05D008856 6.0e-109 399.1 335 77.0
Prupe.3G180100 Prunus persica HOM05D006642 ORTHO05D008856 1.0e-108 398.3 334 77.2
Sed0004539 Sechium edule HOM05D006642 ORTHO05D008856 1.1e-107 394.8 335 77.3
CSS0001521 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 3.3e-107 393.3 336 76.5
CSS0049788 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 3.3e-107 393.3 336 76.5
Manes.09G006600 Manihot esculenta HOM05D006642 ORTHO05D008856 2.1e-106 390.6 334 75.4
Dinv09723 Davidia involucrata HOM05D006642 ORTHO05D008856 2.8e-106 390.2 335 76.7
CANSAT64G1219 Cannabis sativa HOM05D006642 ORTHO05D008856 4.0e-105 386.3 334 75.4
TAR624G0481 Trochodendron aralioides HOM05D006642 ORTHO05D008856 4.0e-105 386.3 316 79.1
MSTRG.6613 Avicennia marina HOM05D006642 ORTHO05D008856 1.7e-103 380.9 331 75.8
Thecc.01G164600 Theobroma cacao HOM05D006642 ORTHO05D008856 1.1e-102 378.3 297 83.2
TWI23G0590 Tripterygium wilfordii HOM05D006642 ORTHO05D008856 4.2e-102 376.3 335 74.3
Potri.001G220300 Populus trichocarpa HOM05D006642 ORTHO05D008856 7.9e-101 372.1 334 74.9
MBI02_g40097_MAGBIO Magnolia biondii HOM05D006642 ORTHO05D008856 2.3e-100 370.5 318 75.8
Sp5g03940 Schrenkiella parvula HOM05D006642 ORTHO05D008856 2.3e-100 370.5 335 74.6
Sc14g0005210 Simmondsia chinensis HOM05D006642 ORTHO05D008856 2.3e-100 370.5 334 72.8
Oeu051395.1 Olea europaea HOM05D006642 ORTHO05D008856 3.9e-100 369.8 298 80.9
Duzib147G0394 Durio zibethinus HOM05D006642 ORTHO05D008856 5.1e-100 369.4 297 75.4
Thhalv10005856m.g Eutrema salsugineum HOM05D006642 ORTHO05D008856 6.7e-100 369.0 335 74.6
RcHm_v2.0_Chr2g0152561 Rosa chinensis HOM05D006642 ORTHO05D008856 6.7e-100 369.0 334 73.4
Sopen07g023170 Solanum pennellii HOM05D006642 ORTHO05D008856 6.7e-100 369.0 334 73.4
COL.COLO4_29911 Corchorus olitorius HOM05D006642 ORTHO05D008856 1.5e-99 367.9 328 76.8
Solyc07g043600.4 Solanum lycopersicum HOM05D006642 ORTHO05D008856 2.5e-99 367.1 334 73.1
PGSC0003DMG400015924 Solanum tuberosum HOM05D006642 ORTHO05D008856 3.3e-99 366.7 331 73.7
arahy.Tifrunner.gnm1.ann1.T7AVMG Arachis hypogaea HOM05D006642 ORTHO05D008856 7.4e-99 365.5 304 78.3
CARHR169450 Cardamine hirsuta HOM05D006642 ORTHO05D008856 7.4e-99 365.5 335 74.3
Gorai.012G039700 Gossypium raimondii HOM05D006642 ORTHO05D008856 9.6e-99 365.2 297 81.5
Nn4g26621 Nelumbo nucifera HOM05D006642 ORTHO05D008856 9.6e-99 365.2 303 79.2
vmacro19989 Vaccinium macrocarpon HOM05D006642 ORTHO05D008856 9.6e-99 365.2 336 73.5
Hma1.2p1_0073F.1_g038540 Hydrangea macrophylla HOM05D006642 ORTHO05D008856 1.3e-98 364.8 330 74.5
Gohir.D04G035200 Gossypium hirsutum HOM05D006642 ORTHO05D008856 1.6e-98 364.4 297 81.5
Gohir.A05G380400 Gossypium hirsutum HOM05D006642 ORTHO05D008856 2.1e-98 364.0 297 81.5
Carub.0005s2580 Capsella rubella HOM05D006642 ORTHO05D008856 2.8e-98 363.6 335 73.7
CAN.G819.5 Capsicum annuum HOM05D006642 ORTHO05D008856 3.7e-98 363.2 334 73.1
Actinidia39996 Actinidia chinensis HOM05D006642 ORTHO05D008856 4.8e-98 362.8 336 72.6
Nitab4.5_0001843g0110 Nicotiana tabacum HOM05D006642 ORTHO05D008856 2.4e-97 360.5 303 77.9
THA.LOC104802288 Tarenaya hassleriana HOM05D006642 ORTHO05D008856 5.3e-97 359.4 345 73.0
FAN02G0564 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.2e-96 358.2 334 71.6
FAN14G1916 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.5e-96 357.8 334 71.6
Nitab4.5_0007665g0020 Nicotiana tabacum HOM05D006642 ORTHO05D008856 1.5e-96 357.8 303 77.6
FvH4_6g38970 Fragaria vesca HOM05D006642 ORTHO05D008856 2.0e-96 357.5 334 71.6
AT3G59040 Arabidopsis thaliana HOM05D006642 ORTHO05D008856 2.6e-96 357.1 335 72.8
Cc05_g00360 Coffea canephora HOM05D006642 ORTHO05D008856 4.5e-96 356.3 334 71.6
DCAR_023000 Daucus carota HOM05D006642 ORTHO05D008856 5.9e-96 355.9 310 74.5
Sabra16G0124100 Salix brachista HOM05D006642 ORTHO05D008856 5.9e-96 355.9 303 78.9
Aa31LG10G13530 Aethionema arabicum HOM05D006642 ORTHO05D008856 1.0e-95 355.1 335 72.2
FAN05G5081 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.0e-95 355.1 334 71.3
Aqoxy5G04293 Aquilegia oxysepala HOM05D006642 ORTHO05D008856 1.3e-95 354.8 304 78.3
Migut.M00108 Erythranthe guttata HOM05D006642 ORTHO05D008856 2.9e-95 353.6 334 58.1
SGA_v2.0_scaffold73G24452 Striga asiatica HOM05D006642 ORTHO05D008856 1.1e-94 351.7 332 70.2
Glyma.20G103800 Glycine max HOM05D006642 ORTHO05D008856 9.3e-94 348.6 304 76.6
GSVIVG01020809001 Vitis vinifera HOM05D006642 ORTHO05D008856 9.3e-94 348.6 290 81.0
HPP92_011054 Vanilla planifolia HOM05D006642 ORTHO05D008856 1.2e-93 348.2 324 71.3
Phvul.007G015300 Phaseolus vulgaris HOM05D006642 ORTHO05D008856 1.6e-93 347.8 304 76.0
Glyma.10G285200 Glycine max HOM05D006642 ORTHO05D008856 3.6e-93 346.7 303 76.2
Lj5g0013784 Lotus japonicus HOM05D006642 ORTHO05D008856 4.6e-93 346.3 300 76.7
ClCG11G016650 Citrullus lanatus HOM05D006642 ORTHO05D008856 6.1e-93 345.9 334 71.3
Ca_11227_v3 Cicer arietinum L. HOM05D006642 ORTHO05D008856 7.9e-93 345.5 304 76.0
HanXRQChr01g0029361 Helianthus annuus HOM05D006642 ORTHO05D008856 7.9e-93 345.5 295 77.3
Ah.07g198470 Amaranthus hybridus HOM05D006642 ORTHO05D008856 1.0e-92 345.1 298 61.4
Medtr1g114300 Medicago truncatula HOM05D006642 ORTHO05D008856 1.3e-92 344.7 303 75.9
Ah.07g201920 Amaranthus hybridus HOM05D006642 ORTHO05D008856 1.8e-92 344.4 298 77.5
CDE05G1065 Ceratophyllum demersum HOM05D006642 ORTHO05D008856 5.1e-92 342.8 303 76.6
AUR62002293 Chenopodium quinoa HOM05D006642 ORTHO05D008856 8.7e-92 342.0 295 77.3
Lsat_1_v5_gn_1_49160 Lactuca sativa HOM05D006642 ORTHO05D008856 8.7e-92 342.0 307 68.4
ECA248G0755 Erigeron canadensis HOM05D006642 ORTHO05D008856 1.5e-91 341.3 298 76.5
ATR1098G151 Amborella trichopoda HOM05D006642 ORTHO05D008856 1.9e-91 340.9 315 71.4
Os08g0191900 Oryza sativa ssp. japonica HOM05D006642 ORTHO05D008856 4.3e-91 339.7 318 71.4
VMungo0720G2195 Vigna mungo HOM05D000164 ORTHO05D000096 4.3e-91 339.7 304 74.7
Psat6g233520 Pisum sativum HOM05D006642 ORTHO05D008856 5.7e-91 339.3 304 74.3
CsaV3_4G032160 Cucumis sativus L. HOM05D006642 ORTHO05D008856 2.2e-90 337.4 334 69.8
unitig_899.g15288 Utricularia gibba HOM05D006642 ORTHO05D008856 3.7e-90 336.7 342 68.4
Lalb_Chr06g0163881 Lupinus albus HOM05D006642 ORTHO05D008856 2.4e-89 334.0 307 73.3
AUR62015397 Chenopodium quinoa HOM05D006642 ORTHO05D008856 3.1e-89 333.6 327 56.3
Zm00001eb413390 Zea mays HOM05D006642 ORTHO05D008856 4.1e-89 333.2 304 73.0
Hund08483 Selenicereus undatus HOM05D006642 ORTHO05D008856 2.6e-88 330.5 335 67.8
C08p34230 Brassica napus HOM05D006642 ORTHO05D008856 6.5e-87 325.9 335 69.6
EL10Ac8g19571 Beta vulgaris HOM05D006642 ORTHO05D008856 1.1e-86 325.1 313 71.6
TPR.G4069 Trifolium pratense HOM05D006642 ORTHO05D008856 1.1e-86 325.1 304 71.7
A09p51470 Brassica napus HOM05D006642 ORTHO05D008856 2.5e-86 323.9 335 69.6
BcaC07g40235 Brassica carinata HOM05D006642 ORTHO05D008856 3.2e-86 323.6 335 69.3
PSO675G5462 Papaver somniferum HOM05D006642 ORTHO05D008856 6.1e-85 319.3 324 70.1
QL02p091883 Quercus lobata HOM05D006642 ORTHO05D008856 2.0e-83 314.3 336 68.8
BraA09t40583Z Brassica rapa HOM05D006642 ORTHO05D008856 7.4e-83 312.4 335 68.1
PSO541G5267 Papaver somniferum HOM05D006642 ORTHO05D008856 1.7e-82 311.2 323 69.0
BolC8t51020H Brassica oleracea HOM05D006642 ORTHO05D008856 2.4e-81 307.4 317 71.0
BcaC07g40308 Brassica carinata HOM05D006642 ORTHO05D008856 2.5e-78 297.4 293 74.7
Rhsim05G0172300 Rhododendron simsii HOM05D006642 ORTHO05D008856 5.5e-78 296.2 312 68.3
QL93p2017_0027 Quercus lobata HOM05D006642 ORTHO05D008856 2.6e-72 277.3 292 70.9
MD17G1132200 Malus domestica HOM05D006642 ORTHO05D008856 8.5e-71 272.3 291 64.9
Cpa.g.sc50.124 Carica papaya HOM05D006642 ORTHO05D008856 1.2e-69 268.5 316 51.3
Haze_13626 Corylus avellana HOM05D006642 ORTHO05D008856 2.2e-66 257.7 211 88.2
MELO3C026387.2 Cucumis melo HOM05D006642 ORTHO05D008856 3.7e-66 256.9 283 68.2
Lj1A585G41 Lonicera japonica HOM05D006642 ORTHO05D008856 6.3e-58 229.6 183 64.5
Nn4g26620 Nelumbo nucifera HOM05D006642 ORTHO05D008856 5.5e-54 216.5 136 75.7
AL5G40920 Arabidopsis lyrata HOM05D006642 ORTHO05D008856 3.4e-51 207.2 196 82.7
HPP92_011074 Vanilla planifolia HOM05D006642 ORTHO05D008856 6.3e-50 203.0 175 57.7
EL10Ac5g11659 Beta vulgaris HOM05D006642 ORTHO05D008856 4.5e-48 196.8 145 66.2
CiPaw.03G197600 Carya illinoinensis HOM05D006642 ORTHO05D008856 1.7e-42 178.3 103 85.4
EL10Ac5g11660 Beta vulgaris HOM05D006642 ORTHO05D008856 1.6e-40 171.8 103 81.6
FAN09G4833 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.5e-38 165.2 123 65.0
Mapoly0047s0104 Marchantia polymorpha HOM05D006642 ORTHO05D008856 3.3e-30 137.5 261 49.0
Pp3c26_11100 Physcomitrium patens HOM05D006642 ORTHO05D008856 7.3e-30 136.3 262 48.1
C06p25860 Brassica napus HOM05D000461 ORTHO05D001840 8.1e-29 132.9 293 35.8
SMO259G0047 Selaginella moellendorffii HOM05D006642 ORTHO05D008856 7.1e-25 119.8 330 39.1
BcaC08g44955 Brassica carinata HOM05D006642 ORTHO05D008856 2.7e-24 117.9 82 74.4
BcaB02g07488 Brassica carinata HOM05D006642 ORTHO05D008856 1.1e-22 112.5 136 67.6
BcaB02g07487 Brassica carinata HOM05D000461 ORTHO05D001840 1.8e-20 105.1 77 71.4
BolC6t37747H Brassica oleracea HOM05D006642 ORTHO05D032904 1.8e-20 105.1 93 62.4
BcaC08g44954 Brassica carinata HOM05D006642 ORTHO05D032904 1.4e-12 79.0 77 58.4
VMungo1215G1169 Vigna mungo HOM05D007173 ORTHO05D009151 1.3e-07 62.4 113 28.3
Ca_27070_v3 Cicer arietinum L. HOM05D002503 ORTHO05D009151 2.3e-07 61.6 113 25.7
Phvul.009G215700 Phaseolus vulgaris HOM05D007173 ORTHO05D009151 3.9e-07 60.8 113 27.4
MBI02_g40094_MAGBIO Magnolia biondii HOM05D006642 ORTHO05D027104 6.6e-07 60.1 31 96.8
Lj1A585G40 Lonicera japonica HOM05D006642 ORTHO05D027104 8.7e-07 59.7 31 93.5


User provided reference genes

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