Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02744 Eucalyptus grandis HOM05D001987 ORTHO05D006514 6.2e-70 267.3 132 100.0
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 3.3e-55 218.4 116 94.0
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 4.3e-55 218.0 116 93.1
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 5.6e-55 217.6 116 93.1
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 1.3e-54 216.5 116 92.2
Peaxi162Scf00238g00149 Petunia axillaris HOM05D001987 ORTHO05D006514 2.8e-54 215.3 116 92.2
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 1.4e-53 213.0 116 91.4
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.1e-53 211.8 116 90.5
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.1e-53 211.8 116 90.5
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.1e-53 211.8 116 90.5
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.1e-53 211.8 116 90.5
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 1.2e-52 209.9 116 89.7
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 4.5e-52 208.0 116 90.5
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 5.8e-52 207.6 116 89.7
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 5.8e-52 207.6 116 89.7
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 5.8e-52 207.6 116 89.7
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 5.8e-52 207.6 116 89.7
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 7.6e-52 207.2 116 88.8
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 1.7e-51 206.1 116 89.7
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 1.7e-51 206.1 116 88.8
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 2.9e-51 205.3 116 88.8
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 2.9e-51 205.3 116 87.9
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 1.4e-50 203.0 116 87.9
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 1.4e-50 203.0 110 92.7
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 1.9e-50 202.6 116 87.9
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 1.9e-50 202.6 109 91.7
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 5.5e-50 201.1 122 86.1
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 5.5e-50 201.1 122 86.1
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 5.5e-50 201.1 122 86.1
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 5.5e-50 201.1 110 90.0
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 7.1e-50 200.7 116 87.1
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 7.1e-50 200.7 116 87.1
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 7.1e-50 200.7 116 85.3
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 1.6e-49 199.5 116 86.2
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 1.6e-49 199.5 116 86.2
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 1.6e-49 199.5 116 86.2
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 1.6e-49 199.5 116 86.2
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 1.6e-49 199.5 116 86.2
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 1.6e-49 199.5 116 86.2
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 1.8e-48 196.1 101 96.0
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 3.0e-48 195.3 119 84.9
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 3.0e-48 195.3 119 84.9
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 8.7e-48 193.7 109 89.0
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 1.5e-47 193.0 116 84.5
arahy.Tifrunner.gnm1.ann1.L3L3JQ Arachis hypogaea HOM05D001987 ORTHO05D006514 4.3e-47 191.4 103 92.2
Lalb_Chr11g0070921 Lupinus albus HOM05D001987 ORTHO05D006514 1.3e-46 189.9 118 83.9
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.1e-46 189.1 112 84.8
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 1.1e-45 186.8 114 82.5
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 2.4e-45 185.7 129 78.3
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 2.0e-44 182.6 124 78.2
ECA240G1514 Erigeron canadensis HOM05D001987 ORTHO05D006514 2.6e-44 182.2 116 82.8
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 3.4e-44 181.8 114 79.8
BraSC48t46330Z Brassica rapa HOM05D001987 ORTHO05D006514 3.4e-44 181.8 103 88.3
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 3.4e-44 181.8 116 82.8
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 3.4e-44 181.8 116 82.8
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 3.4e-44 181.8 116 82.8
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 3.4e-44 181.8 116 82.8
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 4.9e-43 177.9 119 79.0
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.4e-43 177.2 116 79.3
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 5.5e-42 174.5 117 78.6
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 6.0e-41 171.0 110 80.0
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 1.4e-37 159.8 108 78.7
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 1.0e-35 153.7 100 78.0
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.9e-34 149.4 115 67.0
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.9e-34 149.4 115 67.0
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.9e-34 149.4 115 67.0
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.9e-34 149.4 115 67.0
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.9e-34 149.4 115 67.0
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.7e-33 145.6 115 66.1
Nitab4.5_0000309g0190 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.5e-31 139.8 96 77.1
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 1.9e-31 139.4 115 66.1
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 1.3e-30 136.7 115 64.3
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.2e-30 136.0 83 84.3
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 1.8e-29 132.9 68 97.1
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.4e-28 128.6 96 69.8
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 1.7e-22 109.8 76 76.3
TPR.G21771 Trifolium pratense HOM05D001987 ORTHO05D006514 1.5e-20 103.2 88 63.6
MELO3C028575.2 Cucumis melo HOM05D001987 ORTHO05D006514 6.5e-19 97.8 57 80.7
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 8.0e-17 90.9 54 81.5
Nitab4.5_0000334g0030 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.4e-16 90.1 58 75.9
EL10Ac1g01304 Beta vulgaris HOM05D001987 ORTHO05D006514 5.2e-16 88.2 77 59.7
Solyc05g045824.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 4.1e-13 78.6 63 66.7
Nitab4.5_0000334g0040 Nicotiana tabacum HOM05D001987 ORTHO05D006514 6.5e-11 71.2 43 74.4
Solyc05g045780.1 Solanum lycopersicum HOM05D001987 ORTHO05D004018 2.5e-10 69.3 42 81.0
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.7e-09 65.9 56 58.9
Nitab4.5_0011784g0040 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.0e-08 63.9 35 82.9
SHI11170 Sapria himalayana HOM05D001987 ORTHO05D006514 4.4e-07 58.5 49 65.3
EL10Ac5g12759 Beta vulgaris HOM05D001987 ORTHO05D006514 5.7e-07 58.2 74 45.9
Lalb_Chr19g0127771 Lupinus albus HOM05D001987 ORTHO05D006514 5.7e-07 58.2 40 72.5
Solyc12g035820.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.8e-06 55.8 29 82.8
Nitab4.5_0010565g0030 Nicotiana tabacum HOM05D000040 ORTHO05D000759 6.3e-06 54.7 36 69.4


User provided reference genes

Program Settings