Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 2.0e-147 525.8 270 100.0
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 1.9e-110 402.9 271 77.1
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 1.9e-110 402.9 272 75.0
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 9.6e-110 400.6 270 74.8
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 4.8e-109 398.3 270 75.2
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 6.2e-109 397.9 272 75.4
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 1.1e-108 397.1 271 73.8
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 3.1e-108 395.6 270 74.1
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 7.6e-107 391.0 271 73.8
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 1.3e-106 390.2 271 73.4
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.7e-106 389.8 271 73.8
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 3.8e-106 388.7 283 70.7
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 1.9e-105 386.3 271 74.2
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 3.2e-105 385.6 270 74.1
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 3.2e-105 385.6 271 72.7
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 3.2e-105 385.6 271 73.8
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 4.2e-105 385.2 271 72.0
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 4.2e-105 385.2 274 71.9
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 5.4e-105 384.8 271 74.5
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 1.2e-104 383.6 271 72.3
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.2e-104 383.6 273 72.5
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 1.6e-104 383.3 269 70.3
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 2.1e-104 382.9 271 71.2
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 3.5e-104 382.1 271 72.3
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 6.0e-104 381.3 270 72.6
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 6.0e-104 381.3 273 70.3
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 6.0e-104 381.3 270 70.7
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 6.0e-104 381.3 270 70.4
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 1.3e-103 380.2 274 72.6
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.8e-103 379.8 271 71.2
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 2.3e-103 379.4 269 70.6
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 3.0e-103 379.0 271 70.5
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 3.9e-103 378.6 271 72.7
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 3.9e-103 378.6 271 69.4
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 5.1e-103 378.3 271 70.8
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 6.7e-103 377.9 272 70.6
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.1e-102 377.1 272 72.1
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 1.1e-102 377.1 271 72.3
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 1.9e-102 376.3 272 72.1
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 2.5e-102 375.9 270 72.6
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.5e-102 375.9 273 71.8
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 4.3e-102 375.2 271 72.7
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 4.3e-102 375.2 330 61.8
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 4.3e-102 375.2 270 72.2
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 5.6e-102 374.8 270 71.1
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 7.4e-102 374.4 272 71.0
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 7.4e-102 374.4 272 71.0
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 1.3e-101 373.6 272 71.0
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.6e-101 373.2 271 70.5
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.6e-101 373.2 271 70.5
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 1.6e-101 373.2 270 69.6
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 2.1e-101 372.9 272 72.1
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 2.8e-101 372.5 270 69.6
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 6.2e-101 371.3 271 71.2
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 8.1e-101 370.9 282 69.1
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 1.8e-100 369.8 272 70.6
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 2.4e-100 369.4 271 70.5
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 4.0e-100 368.6 274 70.8
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 5.3e-100 368.2 270 70.0
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.3e-100 368.2 271 69.0
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 5.3e-100 368.2 270 68.9
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 6.9e-100 367.9 271 70.5
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 6.9e-100 367.9 271 69.7
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 6.9e-100 367.9 270 69.3
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 9.0e-100 367.5 270 69.3
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 1.2e-99 367.1 273 68.5
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 1.5e-99 366.7 272 70.2
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.0e-99 366.3 271 68.6
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.0e-99 366.3 271 68.6
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.0e-99 366.3 271 69.7
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.6e-99 365.9 271 70.5
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.8e-99 364.8 271 69.7
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 7.6e-99 364.4 283 68.2
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 1.0e-98 364.0 272 67.6
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.2e-98 362.8 273 69.6
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 2.9e-98 362.5 270 69.3
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 4.9e-98 361.7 306 62.7
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 4.9e-98 361.7 306 62.7
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 6.5e-98 361.3 285 67.0
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 8.4e-98 360.9 273 69.6
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 1.1e-97 360.5 270 70.4
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 1.9e-97 359.8 296 64.2
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.5e-97 359.4 286 66.4
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.2e-97 359.0 273 69.2
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.2e-97 359.0 273 69.2
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 4.2e-97 358.6 270 69.6
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 9.3e-97 357.5 265 69.8
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 1.6e-96 356.7 263 71.1
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 1.6e-96 356.7 293 62.5
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 3.5e-96 355.5 274 69.3
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 7.9e-96 354.4 273 68.5
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 7.9e-96 354.4 273 68.5
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 1.0e-95 354.0 271 67.9
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.3e-95 353.6 272 67.6
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 5.1e-95 351.7 298 63.4
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 1.5e-94 350.1 271 66.1
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 1.5e-94 350.1 270 68.9
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 2.5e-94 349.4 277 67.5
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 3.3e-94 349.0 273 67.4
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 4.3e-94 348.6 343 55.7
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 1.4e-92 343.6 254 69.7
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 1.5e-91 340.1 274 65.7
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 2.6e-91 339.3 259 68.0
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 1.7e-90 336.7 237 75.1
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 2.2e-90 336.3 270 64.4
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 3.2e-89 332.4 273 67.4
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 5.5e-89 331.6 270 63.3
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 5.5e-89 331.6 273 66.7
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.6e-88 330.1 273 66.7
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 2.1e-88 329.7 332 57.5
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 1.3e-87 327.0 273 66.7
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 1.3e-87 327.0 273 63.4
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 2.8e-85 319.3 265 62.6
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 1.1e-84 317.4 231 70.6
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 1.1e-84 317.4 234 67.5
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 1.8e-84 316.6 266 62.8
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 2.4e-84 316.2 273 66.3
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 3.1e-84 315.8 231 70.1
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 5.3e-84 315.1 276 64.1
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.3e-84 315.1 232 69.4
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 1.2e-83 313.9 318 56.6
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 2.0e-83 313.2 276 62.0
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 5.9e-83 311.6 278 61.9
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 3.2e-81 305.8 231 69.3
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 4.2e-81 305.4 231 68.0
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 9.4e-81 304.3 272 59.6
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 1.6e-80 303.5 233 68.2
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 9.7e-78 294.3 358 50.6
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 6.3e-77 291.6 261 60.5
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 2.4e-76 289.7 338 51.8
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 2.6e-75 286.2 266 57.9
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 2.7e-72 276.2 270 57.8
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 7.9e-72 274.6 279 54.5
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 6.7e-71 271.6 232 62.9
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 9.7e-70 267.7 226 63.7
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.2e-69 266.5 284 54.6
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 7.2e-65 251.5 259 56.0
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 9.4e-65 251.1 199 68.3
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 1.4e-63 247.3 276 51.1
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 3.0e-63 246.1 229 57.6
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 2.6e-62 243.0 182 69.8
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 3.7e-61 239.2 261 51.0
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 3.7e-61 239.2 226 58.8
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 2.4e-60 236.5 202 62.4
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 2.4e-60 236.5 261 50.6
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 4.1e-60 235.7 270 51.1
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 1.6e-59 233.8 173 67.1
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 1.6e-59 233.8 173 66.5
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.4e-55 220.7 271 46.9
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 1.8e-52 210.3 149 67.8
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 3.1e-52 209.5 176 61.9
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 2.0e-51 206.8 163 66.9
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 4.5e-51 205.7 170 64.1
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 7.7e-51 204.9 149 68.5
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 1.9e-49 200.3 131 75.6
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 1.6e-48 197.2 140 67.9
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 2.3e-47 193.4 259 46.7
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 3.1e-44 183.0 212 50.9
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 5.4e-44 182.2 257 47.1
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 3.5e-43 179.5 143 66.4
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 6.1e-40 168.7 125 66.4
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 1.8e-39 167.2 233 44.6
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.8e-39 167.2 200 49.0
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.9e-33 147.1 140 57.9
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 1.4e-31 141.0 133 60.2
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.4e-30 136.3 230 38.7
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.9e-28 130.6 164 47.0
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 4.6e-27 125.9 91 70.3
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 4.6e-27 125.9 265 36.2
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 2.3e-26 123.6 88 70.5
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.2e-22 111.3 69 73.9
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 9.8e-22 108.2 150 51.3
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.0e-18 96.7 67 70.1
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 3.9e-18 96.3 80 63.8
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 5.1e-18 95.9 151 43.0
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 1.3e-13 81.3 75 61.3
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 4.3e-09 66.2 60 55.0
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.4e-07 60.5 42 71.4
HPP92_019650 Vanilla planifolia HOM05D001715 ORTHO05D004824 4.4e-06 56.2 174 28.2
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 9.9e-06 55.1 40 70.0


User provided reference genes

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