Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01567 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.2e-32 142.5 68 100.0
Eucgr.L02413 Eucalyptus grandis HOM05D005128 ORTHO05D006227 5.9e-32 140.2 68 98.5
Eucgr.E01576 Eucalyptus grandis HOM05D005128 ORTHO05D006227 6.5e-31 136.7 68 95.6
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.9e-30 135.2 68 94.1
PGR042G1446 Punica granatum HOM05D005128 ORTHO05D006227 3.2e-30 134.4 68 92.6
ATR0057G123 Amborella trichopoda HOM05D005128 ORTHO05D006227 5.5e-30 133.7 68 91.2
Sabra14G0033100 Salix brachista HOM05D005128 ORTHO05D006227 5.5e-30 133.7 68 91.2
GSVIVG01018248001 Vitis vinifera HOM05D005128 ORTHO05D006227 5.5e-30 133.7 68 91.2
CSS0048126 Camellia sinensis var. sinensis HOM05D005128 ORTHO05D006227 1.2e-29 132.5 68 89.7
COL.COLO4_12428 Corchorus olitorius HOM05D005128 ORTHO05D006227 1.2e-29 132.5 68 89.7
CsaV3_6G001140 Cucumis sativus L. HOM05D005128 ORTHO05D006227 1.2e-29 132.5 68 89.7
Prupe.2G127400 Prunus persica HOM05D005128 ORTHO05D006227 1.2e-29 132.5 68 89.7
Thecc.01G392500 Theobroma cacao HOM05D005128 ORTHO05D006227 1.2e-29 132.5 68 89.7
TWI14G0708 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 1.2e-29 132.5 68 89.7
TWI14G1050 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 1.2e-29 132.5 68 89.7
ClCG11G006910 Citrullus lanatus HOM05D005128 ORTHO05D006227 1.6e-29 132.1 68 89.7
MELO3C008212.2 Cucumis melo HOM05D005128 ORTHO05D006227 1.6e-29 132.1 68 89.7
Sed0016496 Sechium edule HOM05D005128 ORTHO05D006227 1.6e-29 132.1 68 89.7
Potri.002G136500 Populus trichocarpa HOM05D005128 ORTHO05D006227 2.1e-29 131.7 68 88.2
FvH4_7g09830 Fragaria vesca HOM05D005128 ORTHO05D006227 2.7e-29 131.3 68 88.2
FAN01G3136 Fragaria x ananassa HOM05D005128 ORTHO05D006227 2.7e-29 131.3 68 88.2
FAN03G0006 Fragaria x ananassa HOM05D005128 ORTHO05D006227 2.7e-29 131.3 68 88.2
FAN10G0506 Fragaria x ananassa HOM05D005128 ORTHO05D006227 2.7e-29 131.3 68 88.2
FAN10G2714 Fragaria x ananassa HOM05D005128 ORTHO05D006227 2.7e-29 131.3 68 88.2
MBI04_g34109_MAGBIO Magnolia biondii HOM05D005128 ORTHO05D006227 2.7e-29 131.3 68 88.2
Potri.014G045200 Populus trichocarpa HOM05D005128 ORTHO05D006227 2.7e-29 131.3 68 88.2
RcHm_v2.0_Chr1g0346991 Rosa chinensis HOM05D005128 ORTHO05D006227 2.7e-29 131.3 68 88.2
Duzib138G0976 Durio zibethinus HOM05D005128 ORTHO05D006227 3.6e-29 131.0 68 88.2
Gohir.D12G099300 Gossypium hirsutum HOM05D005128 ORTHO05D006227 3.6e-29 131.0 68 88.2
Gorai.008G108000 Gossypium raimondii HOM05D005128 ORTHO05D006227 3.6e-29 131.0 68 88.2
MD02G1216700 Malus domestica HOM05D005128 ORTHO05D006227 3.6e-29 131.0 68 88.2
FAN06G2047 Fragaria x ananassa HOM05D005128 ORTHO05D006227 6.1e-29 130.2 68 88.2
Manes.01G272200 Manihot esculenta HOM05D005128 ORTHO05D006227 6.1e-29 130.2 68 86.8
Nn6g33850 Nelumbo nucifera HOM05D005128 ORTHO05D006227 6.1e-29 130.2 68 86.8
vmacro13485 Vaccinium macrocarpon HOM05D005128 ORTHO05D006227 6.1e-29 130.2 68 86.8
Actinidia40389 Actinidia chinensis HOM05D005128 ORTHO05D006227 8.0e-29 129.8 68 86.8
Nitab4.5_0002874g0020 Nicotiana tabacum HOM05D005128 ORTHO05D006227 1.0e-28 129.4 68 86.8
Nitab4.5_0003553g0110 Nicotiana tabacum HOM05D005128 ORTHO05D006227 1.0e-28 129.4 68 86.8
Solyc01g090450.3 Solanum lycopersicum HOM05D005128 ORTHO05D006227 1.0e-28 129.4 68 86.8
Cpa.g.sc101.28 Carica papaya HOM05D005128 ORTHO05D006227 1.4e-28 129.0 68 86.8
Eucgr.E04335 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.4e-28 129.0 68 91.2
FAN03G2425 Fragaria x ananassa HOM05D005128 ORTHO05D006227 1.4e-28 129.0 66 87.9
FAN06G2910 Fragaria x ananassa HOM05D005128 ORTHO05D006227 1.4e-28 129.0 66 87.9
TAR374G1117 Trochodendron aralioides HOM05D005128 ORTHO05D006227 1.4e-28 129.0 68 85.3
Atru.chr5.161 Acer truncatum HOM05D005128 ORTHO05D006227 1.8e-28 128.6 68 86.8
Ciclev10029559m.g Citrus clementina HOM05D005128 ORTHO05D006227 1.8e-28 128.6 68 86.8
ECA234G3101 Erigeron canadensis HOM05D005128 ORTHO05D006227 1.8e-28 128.6 68 85.3
Gohir.A12G096500 Gossypium hirsutum HOM05D005128 ORTHO05D006227 1.8e-28 128.6 68 85.3
HanXRQChr05g0138471 Helianthus annuus HOM05D005128 ORTHO05D006227 1.8e-28 128.6 68 85.3
SGA_v2.0_scaffold52G19215 Striga asiatica HOM05D005128 ORTHO05D006227 1.8e-28 128.6 68 85.3
Aqoxy3G02773 Aquilegia oxysepala HOM05D005128 ORTHO05D006227 2.3e-28 128.3 68 85.3
CDE02G2422 Ceratophyllum demersum HOM05D005128 ORTHO05D006227 2.3e-28 128.3 68 85.3
Peaxi162Scf00030g00515 Petunia axillaris HOM05D005128 ORTHO05D006227 2.3e-28 128.3 68 85.3
CAN.G362.11 Capsicum annuum HOM05D005128 ORTHO05D006227 3.0e-28 127.9 68 85.3
CiPaw.13G027900 Carya illinoinensis HOM05D005128 ORTHO05D006227 3.0e-28 127.9 68 86.8
Os11g0557900 Oryza sativa ssp. japonica HOM05D005128 ORTHO05D006227 3.0e-28 127.9 68 83.8
Zm00001eb201920 Zea mays HOM05D005128 ORTHO05D006227 3.0e-28 127.9 68 83.8
Cc02_g24910 Coffea canephora HOM05D005128 ORTHO05D006227 3.9e-28 127.5 68 85.3
PSO782G3280 Papaver somniferum HOM05D005128 ORTHO05D006227 3.9e-28 127.5 68 86.8
unitig_0.g1324 Utricularia gibba HOM05D005128 ORTHO05D006227 3.9e-28 127.5 68 85.3
Sopen01g036240 Solanum pennellii HOM05D005128 ORTHO05D006227 5.2e-28 127.1 68 85.3
CDE11G0478 Ceratophyllum demersum HOM05D005128 ORTHO05D006227 6.7e-28 126.7 68 82.4
Migut.A00726 Erythranthe guttata HOM05D005128 ORTHO05D006227 6.7e-28 126.7 68 85.3
MSTRG.20701 Avicennia marina HOM05D005128 ORTHO05D006227 8.8e-28 126.3 68 83.8
Cfa011089 Carpinus fangiana HOM05D005128 ORTHO05D006227 1.1e-27 125.9 68 83.8
TWI59G1443 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 1.1e-27 125.9 68 83.8
Lsat_1_v5_gn_4_46700 Lactuca sativa HOM05D005128 ORTHO05D006227 1.5e-27 125.6 68 82.4
Migut.B01551 Erythranthe guttata HOM05D005128 ORTHO05D006227 2.0e-27 125.2 68 83.8
Lj3g0015662 Lotus japonicus HOM05D005128 ORTHO05D006227 2.0e-27 125.2 68 83.8
PSO063G1454 Papaver somniferum HOM05D005128 ORTHO05D006227 3.3e-27 124.4 68 85.3
SGA_v2.0_scaffold153G36917 Striga asiatica HOM05D005128 ORTHO05D006227 3.3e-27 124.4 68 80.9
Glyma.07G112500 Glycine max HOM05D005128 ORTHO05D006227 4.4e-27 124.0 68 82.4
Phvul.010G052100 Phaseolus vulgaris HOM05D005128 ORTHO05D006227 4.4e-27 124.0 68 82.4
QL04p030930 Quercus lobata HOM05D005128 ORTHO05D006227 4.4e-27 124.0 67 85.1
Hund11691 Selenicereus undatus HOM05D005128 ORTHO05D006227 4.4e-27 124.0 68 83.8
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 4.4e-27 124.0 68 80.9
VMungo0331G0261 Vigna mungo HOM05D005128 ORTHO05D006227 4.4e-27 124.0 68 82.4
Medtr8g006725 Medicago truncatula HOM05D005128 ORTHO05D006227 5.7e-27 123.6 68 83.8
TPR.G33121 Trifolium pratense HOM05D005128 ORTHO05D006227 5.7e-27 123.6 68 83.8
Lalb_Chr07g0195501 Lupinus albus HOM05D005128 ORTHO05D006227 9.7e-27 122.9 68 80.9
Lalb_Chr13g0304581 Lupinus albus HOM05D005128 ORTHO05D006227 9.7e-27 122.9 68 80.9
CiPaw.14G021600 Carya illinoinensis HOM05D005128 ORTHO05D006227 1.3e-26 122.5 68 85.3
Ca_14055_v3 Cicer arietinum L. HOM05D005128 ORTHO05D006227 1.3e-26 122.5 68 82.4
Psat0s118g0040 Pisum sativum HOM05D005128 ORTHO05D006227 1.3e-26 122.5 68 82.4
Medtr1g112900 Medicago truncatula HOM05D005128 ORTHO05D006227 1.7e-26 122.1 68 82.4
HanXRQChr16g0520301 Helianthus annuus HOM05D005128 ORTHO05D006227 2.2e-26 121.7 68 79.4
CARHR248040 Cardamine hirsuta HOM05D005128 ORTHO05D006227 2.8e-26 121.3 68 80.9
AUR62023426 Chenopodium quinoa HOM05D005128 ORTHO05D006227 2.8e-26 121.3 68 80.9
Sc02g0003030 Simmondsia chinensis HOM05D005128 ORTHO05D006227 2.8e-26 121.3 68 80.9
THA.LOC104814071 Tarenaya hassleriana HOM05D005128 ORTHO05D006227 3.7e-26 120.9 68 79.4
AL6G53500 Arabidopsis lyrata HOM05D005128 ORTHO05D006227 6.3e-26 120.2 68 79.4
Carub.0006s3721 Capsella rubella HOM05D005128 ORTHO05D006227 6.3e-26 120.2 68 79.4
AT4G01710 Arabidopsis thaliana HOM05D005128 ORTHO05D006227 8.2e-26 119.8 68 79.4
Glyma.03G114200 Glycine max HOM05D005128 ORTHO05D006227 1.4e-25 119.0 68 79.4
SMO203G0150 Selaginella moellendorffii HOM05D005128 ORTHO05D006227 1.4e-25 119.0 68 76.5
AUR62013728 Chenopodium quinoa HOM05D005128 ORTHO05D006227 1.8e-25 118.6 68 77.9
Thhalv10005116m.g Eutrema salsugineum HOM05D005128 ORTHO05D006227 1.8e-25 118.6 68 77.9
Manes.05G053000 Manihot esculenta HOM05D005128 ORTHO05D006227 1.8e-25 118.6 63 84.1
Nn1g00897 Nelumbo nucifera HOM05D005128 ORTHO05D006227 1.8e-25 118.6 68 79.4
EL10Ac1g00782 Beta vulgaris HOM05D005128 ORTHO05D006227 2.4e-25 118.2 68 77.9
A06p32130 Brassica napus HOM05D005128 ORTHO05D006227 2.4e-25 118.2 68 77.9
BolC3t18340H Brassica oleracea HOM05D005128 ORTHO05D006227 2.4e-25 118.2 68 77.9
BraA06t26141Z Brassica rapa HOM05D005128 ORTHO05D006227 2.4e-25 118.2 68 77.9
Sp2g28380 Schrenkiella parvula HOM05D005128 ORTHO05D006227 4.1e-25 117.5 68 77.9
C03p60810 Brassica napus HOM05D005128 ORTHO05D006227 5.3e-25 117.1 68 76.5
Carub.0008s2615 Capsella rubella HOM05D005128 ORTHO05D006227 9.1e-25 116.3 68 76.5
Aa31LG5G70 Aethionema arabicum HOM05D005128 ORTHO05D006227 1.2e-24 115.9 68 76.5
Gohir.D11G020200 Gossypium hirsutum HOM05D005128 ORTHO05D006227 1.2e-24 115.9 68 75.0
AT5G65274 Arabidopsis thaliana HOM05D005128 ORTHO05D006227 2.0e-24 115.2 68 76.5
Gohir.A13G167950 Gossypium hirsutum HOM05D005128 ORTHO05D006227 2.0e-24 115.2 68 73.5
Eucgr.E02797 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.3e-23 112.5 70 85.7
AagrBONN_evm.TU.Sc2ySwM_369.249 Anthoceros agrestis HOM05D005128 ORTHO05D006227 5.0e-23 110.5 68 67.6
Gorai.007G021500 Gossypium raimondii HOM05D005128 ORTHO05D006227 5.0e-23 110.5 68 70.6
Mapoly0006s0266 Marchantia polymorpha HOM05D005128 ORTHO05D006227 5.0e-23 110.5 68 70.6
arahy.Tifrunner.gnm1.ann1.L9RWF4 Arachis hypogaea HOM05D005128 ORTHO05D006227 1.6e-21 105.5 100 55.0
arahy.Tifrunner.gnm1.ann1.V0IP08 Arachis hypogaea HOM05D005128 ORTHO05D006227 1.6e-21 105.5 100 55.0
AagrBONN_evm.TU.Sc2ySwM_369.256 Anthoceros agrestis HOM05D005128 ORTHO05D006227 3.6e-21 104.4 67 71.6
AL8G42840 Arabidopsis lyrata HOM05D005128 ORTHO05D006227 6.1e-21 103.6 65 70.8
PGSC0003DMG400026042 Solanum tuberosum HOM05D005128 ORTHO05D006227 1.4e-20 102.4 121 47.9
SEGI_29435 Sequoiadendron giganteum HOM05D005128 ORTHO05D006227 8.8e-20 99.8 62 71.0
MD07G1103100 Malus domestica HOM05D005128 ORTHO05D006227 2.0e-19 98.6 68 73.5
Pp3c15_3940 Physcomitrium patens HOM05D005128 ORTHO05D006227 3.4e-19 97.8 68 63.2
Ah.05g173200 Amaranthus hybridus HOM05D005128 ORTHO05D006227 2.4e-17 91.7 132 41.7
Lalb_Chr13g0304551 Lupinus albus HOM05D005128 ORTHO05D006227 3.5e-16 87.8 46 82.6
TPR.G6927 Trifolium pratense HOM05D005128 ORTHO05D006922 1.3e-15 85.9 45 82.2
Haze_02808 Corylus avellana HOM05D005128 ORTHO05D006227 4.2e-14 80.9 69 60.9
Sed0016493 Sechium edule HOM05D005128 ORTHO05D006227 2.3e-12 75.1 68 60.3
BcaC03g18322 Brassica carinata HOM05D005128 ORTHO05D006227 4.5e-08 60.8 42 71.4


User provided reference genes

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