Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01034 Eucalyptus grandis HOM05D005790 ORTHO05D007464 4.7e-227 790.8 383 100.0
Cfa013914 Carpinus fangiana HOM05D005790 ORTHO05D007464 1.1e-159 567.0 389 71.2
PGR031G1208 Punica granatum HOM05D005790 ORTHO05D007464 3.2e-159 565.5 391 71.9
Dinv31817 Davidia involucrata HOM05D005790 ORTHO05D007464 2.4e-154 549.3 388 69.1
Actinidia37976 Actinidia chinensis HOM05D005790 ORTHO05D007464 1.3e-152 543.5 388 68.8
COL.COLO4_26188 Corchorus olitorius HOM05D005790 ORTHO05D007464 6.5e-152 541.2 392 69.1
GSVIVG01009836001 Vitis vinifera HOM05D005790 ORTHO05D007464 7.1e-151 537.7 382 67.8
QL02p010842 Quercus lobata HOM05D005790 ORTHO05D007464 7.9e-150 534.3 455 60.9
CANSAT01G0079 Cannabis sativa HOM05D005790 ORTHO05D007464 1.0e-149 533.9 382 69.4
CiPaw.07G153400 Carya illinoinensis HOM05D005790 ORTHO05D007464 1.8e-149 533.1 389 68.9
Manes.13G125500 Manihot esculenta HOM05D005790 ORTHO05D007464 4.3e-148 528.5 389 67.6
MELO3C024652.2 Cucumis melo HOM05D005790 ORTHO05D007464 1.3e-147 526.9 385 66.5
CsaV3_1G045470 Cucumis sativus L. HOM05D005790 ORTHO05D007464 2.8e-147 525.8 385 66.5
Gohir.A06G005800 Gossypium hirsutum HOM05D005790 ORTHO05D007464 2.8e-147 525.8 386 67.4
CSS0050056 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 1.8e-146 523.1 386 66.6
RcHm_v2.0_Chr6g0272131 Rosa chinensis HOM05D005790 ORTHO05D007464 1.2e-145 520.4 387 66.1
Gorai.010G006000 Gossypium raimondii HOM05D005790 ORTHO05D007464 2.0e-145 519.6 386 66.8
Potri.009G002100 Populus trichocarpa HOM05D005790 ORTHO05D007464 5.8e-145 518.1 388 66.8
Prupe.1G369900 Prunus persica HOM05D005790 ORTHO05D007464 2.2e-144 516.2 392 65.6
MD15G1016100 Malus domestica HOM05D005790 ORTHO05D007464 3.8e-144 515.4 389 67.1
Gohir.D06G001600 Gossypium hirsutum HOM05D005790 ORTHO05D007464 5.0e-144 515.0 386 66.3
Lj1g0012079 Lotus japonicus HOM05D005790 ORTHO05D007464 5.0e-144 515.0 387 65.4
TAR381G1687 Trochodendron aralioides HOM05D005790 ORTHO05D007464 6.5e-144 514.6 406 63.3
ClCG05G018560 Citrullus lanatus HOM05D005790 ORTHO05D007464 8.4e-144 514.2 413 63.2
Sed0009865 Sechium edule HOM05D005790 ORTHO05D007464 8.4e-144 514.2 389 65.6
FvH4_2g39120 Fragaria vesca HOM05D005790 ORTHO05D007464 1.1e-143 513.8 387 65.4
vmacro21704 Vaccinium macrocarpon HOM05D005790 ORTHO05D007464 5.5e-143 511.5 399 64.2
ECA247G0379 Erigeron canadensis HOM05D005790 ORTHO05D007464 1.5e-140 503.4 382 62.8
PSO675G3524 Papaver somniferum HOM05D005790 ORTHO05D007464 2.5e-140 502.7 381 64.0
Ciclev10008674m.g Citrus clementina HOM05D005790 ORTHO05D007464 5.7e-140 501.5 384 65.1
FAN20G0385 Fragaria x ananassa HOM05D005790 ORTHO05D007464 7.4e-140 501.1 392 63.3
Sp7g27670 Schrenkiella parvula HOM05D005790 ORTHO05D007464 1.6e-139 500.0 382 63.4
BraA01t00778Z Brassica rapa HOM05D005790 ORTHO05D007464 1.4e-138 496.9 385 63.9
Aqoxy2G03135 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 4.1e-138 495.4 378 63.8
Cc10_g02010 Coffea canephora HOM05D005790 ORTHO05D007464 6.9e-138 494.6 382 64.4
PGSC0003DMG400016117 Solanum tuberosum HOM05D005790 ORTHO05D007464 1.2e-137 493.8 384 63.0
AL7G22390 Arabidopsis lyrata HOM05D005790 ORTHO05D007464 2.0e-137 493.0 384 63.5
CARHR237760 Cardamine hirsuta HOM05D005790 ORTHO05D007464 2.0e-137 493.0 383 62.7
FAN15G2431 Fragaria x ananassa HOM05D005790 ORTHO05D007464 2.0e-137 493.0 426 59.2
TWI36G0257 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 3.4e-137 492.3 413 61.3
Lalb_Chr08g0246071 Lupinus albus HOM05D005790 ORTHO05D007464 4.5e-137 491.9 381 64.0
Carub.0004s1477 Capsella rubella HOM05D005790 ORTHO05D007464 1.3e-136 490.3 382 63.6
Glyma.06G026400 Glycine max HOM05D005790 ORTHO05D007464 1.3e-136 490.3 386 63.2
PSO541G0736 Papaver somniferum HOM05D005790 ORTHO05D007464 1.7e-136 490.0 383 62.7
Ca_02056_v3 Cicer arietinum L. HOM05D005790 ORTHO05D007464 6.5e-136 488.0 383 62.9
MD08G1017100 Malus domestica HOM05D005790 ORTHO05D007464 6.5e-136 488.0 413 62.7
Thhalv10025433m.g Eutrema salsugineum HOM05D005790 ORTHO05D007464 1.1e-135 487.3 382 61.5
Sopen11g005650 Solanum pennellii HOM05D005790 ORTHO05D007464 1.1e-135 487.3 384 62.0
AT4G29860 Arabidopsis thaliana HOM05D005790 ORTHO05D007464 1.9e-135 486.5 384 63.0
arahy.Tifrunner.gnm1.ann1.S6ZM1I Arachis hypogaea HOM05D005790 ORTHO05D007464 1.9e-135 486.5 385 64.4
C01p09340 Brassica napus HOM05D005790 ORTHO05D007464 2.5e-135 486.1 385 62.6
BolC1t00922H Brassica oleracea HOM05D005790 ORTHO05D007464 2.5e-135 486.1 385 62.6
FAN20G1847 Fragaria x ananassa HOM05D005790 ORTHO05D007464 3.2e-135 485.7 421 58.9
Solyc11g010910.3 Solanum lycopersicum HOM05D005790 ORTHO05D007464 3.2e-135 485.7 384 61.7
A01p08300 Brassica napus HOM05D005790 ORTHO05D007464 4.2e-135 485.3 387 62.8
EL10Ac1g00445 Beta vulgaris HOM05D005790 ORTHO05D007464 5.5e-135 485.0 381 62.2
arahy.Tifrunner.gnm1.ann1.BXK9RQ Arachis hypogaea HOM05D005790 ORTHO05D007464 7.2e-135 484.6 385 63.9
AUR62019151 Chenopodium quinoa HOM05D005790 ORTHO05D007464 4.6e-134 481.9 381 61.2
Haze_22599 Corylus avellana HOM05D005790 ORTHO05D007464 4.6e-134 481.9 499 52.9
AUR62014415 Chenopodium quinoa HOM05D005790 ORTHO05D007464 6.1e-134 481.5 404 59.7
Lsat_1_v5_gn_1_16241 Lactuca sativa HOM05D005790 ORTHO05D007464 1.0e-133 480.7 385 61.8
VMungo1309G1814 Vigna mungo HOM05D005790 ORTHO05D007464 1.0e-133 480.7 391 61.9
Medtr3g113190 Medicago truncatula HOM05D005790 ORTHO05D007464 2.3e-133 479.6 384 61.7
Duzib093G0196 Durio zibethinus HOM05D005790 ORTHO05D007464 3.0e-133 479.2 358 67.3
Rhsim06G0026000 Rhododendron simsii HOM05D005790 ORTHO05D007464 5.7e-132 474.9 471 53.5
Phvul.009G014700 Phaseolus vulgaris HOM05D005790 ORTHO05D007464 9.7e-132 474.2 386 60.6
CSS0048998 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 1.4e-130 470.3 355 65.4
Sc02g0005160 Simmondsia chinensis HOM05D005790 ORTHO05D007464 6.9e-130 468.0 381 60.6
Thecc.08G038500 Theobroma cacao HOM05D005790 ORTHO05D007464 1.2e-129 467.2 388 62.4
MSTRG.18414 Avicennia marina HOM05D005790 ORTHO05D007464 2.0e-129 466.5 380 59.5
DCAR_017500 Daucus carota HOM05D005790 ORTHO05D007464 3.8e-128 462.2 386 60.9
Zm00001eb378230 Zea mays HOM05D005790 ORTHO05D007464 9.1e-122 441.0 381 55.1
HanXRQChr02g0043921 Helianthus annuus HOM05D005790 ORTHO05D007464 1.6e-121 440.3 362 60.2
Nn5g29250 Nelumbo nucifera HOM05D005790 ORTHO05D007464 3.5e-121 439.1 371 60.6
ATR0945G002 Amborella trichopoda HOM05D005790 ORTHO05D007464 4.5e-121 438.7 406 57.4
CsaV3_UNG233270 Cucumis sativus L. HOM05D005790 ORTHO05D007464 2.2e-120 436.4 375 58.7
THA.LOC104811397 Tarenaya hassleriana HOM05D005790 ORTHO05D007464 3.8e-120 435.6 378 58.7
Peaxi162Scf00085g00528 Petunia axillaris HOM05D005790 ORTHO05D007464 8.5e-120 434.5 384 57.3
SGA_v2.0_scaffold8G04609 Striga asiatica HOM05D005790 ORTHO05D007464 4.7e-118 428.7 383 56.9
unitig_26.g10135 Utricularia gibba HOM05D005790 ORTHO05D007464 5.7e-116 421.8 380 54.5
Atru.BG.234.p Acer truncatum HOM05D005790 ORTHO05D007464 2.8e-115 419.5 380 59.5
Migut.D00577 Erythranthe guttata HOM05D005790 ORTHO05D007464 6.3e-115 418.3 383 55.1
SHI02412 Sapria himalayana HOM05D005790 ORTHO05D007464 2.4e-114 416.4 386 54.9
Os06g0131100 Oryza sativa ssp. japonica HOM05D005790 ORTHO05D007464 7.0e-114 414.8 380 53.9
Lj4A790T66 Lonicera japonica HOM05D005790 ORTHO05D007464 1.6e-105 387.1 338 59.8
Sabra09G0000400 Salix brachista HOM05D005790 ORTHO05D007464 1.3e-104 384.0 499 45.5
FAN27G0896 Fragaria x ananassa HOM05D005790 ORTHO05D007464 9.5e-95 351.3 391 50.4
Ah.05g171860 Amaranthus hybridus HOM05D005790 ORTHO05D007464 2.8e-94 349.7 327 54.1
Atru.chr13.345 Acer truncatum HOM05D005790 ORTHO05D007464 3.0e-88 329.7 218 71.1
SMO147G0253 Selaginella moellendorffii HOM05D005790 ORTHO05D007464 5.8e-84 315.5 380 45.8
Aqoxy4G01228 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 1.7e-83 313.9 276 56.5
Pp3c20_12860 Physcomitrium patens HOM05D005790 ORTHO05D007464 2.7e-81 306.6 379 43.0
Aa31LG4G5850 Aethionema arabicum HOM05D005790 ORTHO05D007464 3.5e-81 306.2 296 55.1
Mapoly0014s0217 Marchantia polymorpha HOM05D005790 ORTHO05D007464 1.7e-80 303.9 379 43.5
TPR.G30295 Trifolium pratense HOM05D005790 ORTHO05D007464 1.2e-76 291.2 170 78.8
SalBow1G3128 Salvia bowleyana HOM05D005790 ORTHO05D007464 3.2e-74 283.1 217 62.7
Oeu061776.2 Olea europaea HOM05D005790 ORTHO05D000708 9.9e-68 261.5 342 44.4
CDE05G1328 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 6.4e-67 258.8 168 69.6
Actinidia29793 Actinidia chinensis HOM05D005790 ORTHO05D007464 1.6e-65 254.2 412 42.5
Psat5g014800 Pisum sativum HOM05D005790 ORTHO05D007464 4.6e-65 252.7 236 55.5
Nitab4.5_0000402g0120 Nicotiana tabacum HOM05D005790 ORTHO05D007464 5.1e-64 249.2 235 56.6
Hund17229 Selenicereus undatus HOM05D005790 ORTHO05D007464 1.2e-62 244.6 146 74.7
Psat5g014760 Pisum sativum HOM05D005790 ORTHO05D007464 2.2e-59 233.8 141 75.2
RcHm_v2.0_Chr6g0302231 Rosa chinensis HOM05D005790 ORTHO05D007464 9.3e-58 228.4 260 47.7
MBI09_g08426_MAGBIO Magnolia biondii HOM05D005790 ORTHO05D007464 4.3e-55 219.5 381 38.1
RcHm_v2.0_Chr4g0408871 Rosa chinensis HOM05D005790 ORTHO05D007464 2.2e-51 207.2 380 37.1
CBR_g7976 Chara braunii HOM05D001993 ORTHO05D004040 2.3e-48 197.2 549 28.4
Nitab4.5_0000402g0130 Nicotiana tabacum HOM05D005790 ORTHO05D007464 8.7e-48 195.3 121 76.9
Cpa.g.sc140.27 Carica papaya HOM05D005790 ORTHO05D007464 1.1e-47 194.9 163 58.9
TWI36G0035 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 3.3e-47 193.4 125 72.8
Gorai.010G006300 Gossypium raimondii HOM05D005790 ORTHO05D007464 3.6e-46 189.9 114 76.3
AagrBONN_evm.TU.Sc2ySwM_369.164 Anthoceros agrestis HOM05D005790 ORTHO05D007464 1.8e-45 187.6 271 40.2
CBR_g24442 Chara braunii HOM05D005790 ORTHO05D007464 7.6e-44 182.2 213 43.7
TPR.G30287 Trifolium pratense HOM05D005790 ORTHO05D007464 1.2e-41 174.9 158 55.1
SEGI_31412 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 1.3e-40 171.4 252 43.7
Aa31LG4G5860 Aethionema arabicum HOM05D005790 ORTHO05D007464 1.8e-37 161.0 99 72.7
RcHm_v2.0_Chr6g0302371 Rosa chinensis HOM05D005790 ORTHO05D007464 3.1e-37 160.2 180 51.1
Cre02.g076850 Chlamydomonas reinhardtii HOM05D005790 ORTHO05D007464 4.5e-36 156.4 440 27.3
Lj4C790T17 Lonicera japonica HOM05D005790 ORTHO05D007464 4.5e-28 129.8 79 77.2
MCO14G170 Micromonas commoda HOM05D005790 ORTHO05D007464 7.2e-26 122.5 453 26.0
HPP92_020941 Vanilla planifolia HOM05D005790 ORTHO05D007464 7.2e-26 122.5 151 47.0
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 3.0e-24 117.1 426 26.5
MD15G1017900 Malus domestica HOM05D005790 ORTHO05D007464 9.1e-21 105.5 219 36.1
MD15G1018000 Malus domestica HOM05D005790 ORTHO05D007464 9.1e-21 105.5 219 36.1
RcHm_v2.0_Chr6g0302301 Rosa chinensis HOM05D005790 ORTHO05D007464 1.5e-20 104.8 193 36.3
HPP92_020940 Vanilla planifolia HOM05D005790 ORTHO05D007464 3.6e-17 93.6 55 74.5
SEGI_12232 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 5.1e-16 89.7 59 61.0
Cpa.g.sc140.30 Carica papaya HOM05D005790 ORTHO05D007464 7.4e-15 85.9 54 72.2
TAR625G0591 Trochodendron aralioides HOM05D000460 ORTHO05D000333 9.7e-15 85.5 103 47.6
Hma1.2p1_1776F.1_g301940 Hydrangea macrophylla HOM05D005790 ORTHO05D007464 6.1e-09 66.2 40 77.5
CDE05G1505 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 7.9e-09 65.9 41 70.7
vmacro12361 Vaccinium macrocarpon HOM05D002561 ORTHO05D006466 1.0e-08 65.5 365 24.1
VMungo0331G1008 Vigna mungo HOM05D005790 ORTHO05D007464 6.7e-08 62.8 27 88.9
COL.COLO4_38433 Corchorus olitorius HOM05D005790 ORTHO05D030850 2.0e-07 61.2 31 77.4
Actinidia29794 Actinidia chinensis HOM05D005790 ORTHO05D030850 4.4e-07 60.1 44 54.5
RhsimUnG0148700 Rhododendron simsii HOM05D000113 ORTHO05D002571 9.7e-07 58.9 32 84.4
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 2.2e-06 57.8 146 28.8
Mapoly0143s0027 Marchantia polymorpha HOM05D002561 ORTHO05D006466 4.8e-06 56.6 384 23.2
unitig_26.g9041 Utricularia gibba HOM05D004736 ORTHO05D006424 6.3e-06 56.2 101 37.6


User provided reference genes

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