Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 2579.7 1320 100.0
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1852.0 1325 69.2
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1807.3 1323 68.0
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1790.0 1328 67.1
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1774.2 1325 67.0
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1761.9 1331 65.7
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1758.0 1328 67.2
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1756.5 1325 67.3
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1751.5 1330 67.5
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1749.9 1329 66.8
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1744.2 1330 66.6
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1743.8 1333 65.3
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1738.4 1328 66.9
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1729.5 1331 65.3
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1724.9 1332 64.9
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1723.8 1328 65.1
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1722.2 1328 65.0
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1720.7 1328 65.6
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1719.9 1328 65.3
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1719.5 1328 64.9
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1718.4 1326 66.1
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1717.6 1328 64.8
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1715.3 1329 65.9
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1713.0 1328 64.7
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1710.7 1329 65.1
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1707.2 1326 66.9
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1701.0 1330 64.0
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1696.4 1250 68.4
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1694.5 1328 64.5
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1672.5 1323 62.7
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1669.4 1329 63.4
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1666.7 1321 63.4
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1652.9 1322 62.8
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1647.5 1246 67.3
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1643.6 1327 62.4
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1642.1 1321 62.3
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1637.9 1319 63.1
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1634.0 1281 63.0
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1630.5 1246 65.3
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1630.5 1320 62.1
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1629.8 1341 61.1
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1629.0 1344 61.6
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1616.3 1328 62.0
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1614.0 1327 61.8
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1609.3 1329 63.3
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1608.6 1344 60.8
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1605.1 1328 61.4
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1600.9 1329 61.3
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1599.7 1330 60.8
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1599.7 1323 61.5
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1597.8 1343 61.1
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1597.0 1325 61.1
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1597.0 1331 60.9
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1592.4 1332 60.7
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1589.3 1333 60.6
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1587.0 1341 60.0
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1585.9 1274 64.4
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1582.8 1323 61.5
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1579.7 1331 60.3
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1575.8 1240 63.4
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1573.5 1325 60.2
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1568.9 1271 61.9
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1568.9 1325 59.8
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1562.0 1331 59.1
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1550.0 1344 58.9
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1536.5 1321 60.0
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1518.8 1328 58.6
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1518.8 1328 58.6
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1518.8 1326 59.0
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1518.1 1328 58.1
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1514.6 1097 69.0
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1509.6 1330 57.7
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1509.2 1333 57.8
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1508.0 1333 57.8
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1506.5 1333 58.4
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1500.0 1334 58.2
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1498.8 1328 58.0
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1495.3 1186 62.7
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1484.5 1327 57.8
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1483.0 1324 57.1
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1482.2 1283 61.5
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1479.2 1357 56.0
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1456.4 1102 66.1
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1452.6 1317 56.9
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1419.8 1336 55.9
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1377.8 1342 52.9
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1369.0 1121 61.6
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1356.3 1350 55.3
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1350.9 1110 61.2
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1348.2 1558 47.7
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1322.0 1330 50.8
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1319.7 1324 53.9
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1314.7 1092 60.7
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1302.3 1151 57.7
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1296.2 1321 53.9
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1245.3 945 65.0
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1191.4 904 64.9
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1148.7 1334 49.5
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1133.2 861 67.2
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1100.5 1258 47.6
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.5e-301 1040.0 757 70.3
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 2.4e-254 883.2 1373 38.5
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 5.5e-235 818.9 1152 39.9
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 7.5e-232 808.5 1201 39.6
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 7.0e-230 802.0 1319 37.3
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 1.6e-226 790.8 854 47.9
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 2.0e-208 730.7 809 50.4
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 1.8e-153 548.1 1498 29.7
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 6.7e-140 503.1 461 61.0
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 8.5e-135 486.1 377 62.1
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 1.8e-129 468.4 359 68.2
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 9.2e-89 333.2 1582 26.9
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 2.5e-86 325.1 314 54.5
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 8.9e-84 316.6 1369 25.6
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 2.4e-73 282.0 247 53.0
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 1.9e-70 272.3 1118 26.4
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 4.2e-65 254.6 303 46.9
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.3e-58 233.0 197 65.0
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 2.5e-46 192.2 1349 24.8
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.3e-44 184.5 130 73.1
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 7.6e-43 180.6 130 72.3
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.2e-40 173.3 204 47.5
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.8e-39 169.5 121 71.9
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 1.1e-38 166.8 226 43.4
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 1.2e-32 146.7 110 68.2
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 2.9e-26 125.6 113 57.5


User provided reference genes

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