Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00140 Eucalyptus grandis HOM05D005018 ORTHO05D006786 2.2e-210 735.3 366 100.0
Thecc.01G136300 Theobroma cacao HOM05D005018 ORTHO05D006786 1.5e-150 536.6 420 68.3
TAR625G0766 Trochodendron aralioides HOM05D005018 ORTHO05D006786 4.9e-149 531.6 447 65.3
PGR119G0715 Punica granatum HOM05D005018 ORTHO05D006786 1.4e-148 530.0 447 64.9
Dinv15533 Davidia involucrata HOM05D005018 ORTHO05D006786 6.0e-147 524.6 447 64.2
Psat7g044640 Pisum sativum HOM05D005018 ORTHO05D006786 2.3e-146 522.7 418 67.5
QL10p041655 Quercus lobata HOM05D005018 ORTHO05D006786 2.3e-146 522.7 447 64.2
CiPaw.03G118700 Carya illinoinensis HOM05D005018 ORTHO05D006786 8.6e-146 520.8 447 64.2
QL10p041885 Quercus lobata HOM05D005018 ORTHO05D006786 1.1e-145 520.4 447 64.0
FvH4_7g05150 Fragaria vesca HOM05D005018 ORTHO05D006786 1.5e-145 520.0 420 66.7
COL.COLO4_35799 Corchorus olitorius HOM05D005018 ORTHO05D006786 3.3e-145 518.8 447 63.8
Ca_17625_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 4.3e-145 518.5 446 63.5
MD02G1260800 Malus domestica HOM05D005018 ORTHO05D006786 7.3e-145 517.7 447 63.5
Cfa002185 Carpinus fangiana HOM05D005018 ORTHO05D006786 9.5e-145 517.3 447 63.5
TPR.G37346 Trifolium pratense HOM05D005018 ORTHO05D006786 1.6e-144 516.5 445 64.0
Glyma.08G001700 Glycine max HOM05D005018 ORTHO05D006786 2.1e-144 516.2 447 63.3
Lj2A615G13 Lonicera japonica HOM05D005018 ORTHO05D006786 2.1e-144 516.2 447 63.1
Duzib264G1136 Durio zibethinus HOM05D005018 ORTHO05D006786 2.8e-144 515.8 447 63.3
Glyma.05G193600 Glycine max HOM05D005018 ORTHO05D006786 2.8e-144 515.8 447 63.5
Gohir.A09G005200 Gossypium hirsutum HOM05D005018 ORTHO05D006786 4.7e-144 515.0 447 63.3
THA.LOC104804457 Tarenaya hassleriana HOM05D005018 ORTHO05D006786 6.2e-144 514.6 447 62.9
Gohir.D09G004500 Gossypium hirsutum HOM05D005018 ORTHO05D006786 8.1e-144 514.2 447 63.3
Gorai.006G006100 Gossypium raimondii HOM05D005018 ORTHO05D006786 8.1e-144 514.2 447 63.3
AUR62006851 Chenopodium quinoa HOM05D005018 ORTHO05D006786 1.1e-143 513.8 447 62.9
TWI79G0394 Tripterygium wilfordii HOM05D005018 ORTHO05D006786 1.4e-143 513.5 447 63.5
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 2.3e-143 512.7 446 63.2
CSS0041776 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 8.9e-143 510.8 447 62.9
Lalb_Chr07g0184291 Lupinus albus HOM05D005018 ORTHO05D006786 8.9e-143 510.8 447 63.3
Potri.005G066300 Populus trichocarpa HOM05D005018 ORTHO05D006786 1.5e-142 510.0 447 62.6
RcHm_v2.0_Chr1g0331701 Rosa chinensis HOM05D005018 ORTHO05D006786 1.5e-142 510.0 447 62.6
Sed0008983 Sechium edule HOM05D005018 ORTHO05D006786 1.5e-142 510.0 447 62.9
Manes.02G085200 Manihot esculenta HOM05D005018 ORTHO05D006786 2.0e-142 509.6 447 62.6
Nn5g28451 Nelumbo nucifera HOM05D005018 ORTHO05D006786 2.0e-142 509.6 447 62.0
Medtr8g094030 Medicago truncatula HOM05D005018 ORTHO05D006786 2.6e-142 509.2 445 63.6
Actinidia06572 Actinidia chinensis HOM05D005018 ORTHO05D006786 3.4e-142 508.8 446 62.3
ClCG01G015110 Citrullus lanatus HOM05D005018 ORTHO05D006786 3.4e-142 508.8 444 63.1
Peaxi162Scf00087g00314 Petunia axillaris HOM05D005018 ORTHO05D006786 4.4e-142 508.4 445 62.9
arahy.Tifrunner.gnm1.ann1.YY52IF Arachis hypogaea HOM05D005018 ORTHO05D006786 5.8e-142 508.1 447 62.6
DCAR_018989 Daucus carota HOM05D005018 ORTHO05D006786 7.6e-142 507.7 447 61.7
Sc09g0002290 Simmondsia chinensis HOM05D005018 ORTHO05D006786 1.3e-141 506.9 447 61.7
EL10Ac4g09610 Beta vulgaris HOM05D005018 ORTHO05D006786 2.9e-141 505.8 447 61.7
Sopen01g030230 Solanum pennellii HOM05D005018 ORTHO05D006786 2.9e-141 505.8 447 62.0
Lj4g0009092 Lotus japonicus HOM05D005018 ORTHO05D006786 4.9e-141 505.0 445 62.7
Cc02_g29440 Coffea canephora HOM05D005018 ORTHO05D006786 6.4e-141 504.6 447 62.6
MELO3C024598.2 Cucumis melo HOM05D005018 ORTHO05D006786 6.4e-141 504.6 447 62.4
CsaV3_6G041220 Cucumis sativus L. HOM05D005018 ORTHO05D006786 6.4e-141 504.6 447 62.2
SalBow6G7214 Salvia bowleyana HOM05D005018 ORTHO05D006786 1.1e-140 503.8 447 61.7
CAN.G410.44 Capsicum annuum HOM05D005018 ORTHO05D006786 1.4e-140 503.4 447 61.3
Solyc01g068290.4 Solanum lycopersicum HOM05D005018 ORTHO05D006786 2.4e-140 502.7 447 62.0
CSS0009965 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 7.1e-140 501.1 461 61.0
MBI03_g13501_MAGBIO Magnolia biondii HOM05D005018 ORTHO05D006786 7.1e-140 501.1 447 61.5
arahy.Tifrunner.gnm1.ann1.IZT9KT Arachis hypogaea HOM05D005018 ORTHO05D006786 2.1e-139 499.6 466 59.9
CANSAT01G0968 Cannabis sativa HOM05D005018 ORTHO05D006786 2.1e-139 499.6 447 61.5
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 3.5e-139 498.8 485 58.1
MD07G1060700 Malus domestica HOM05D005018 ORTHO05D006786 6.0e-139 498.0 433 64.0
Aqoxy6G00298 Aquilegia oxysepala HOM05D005018 ORTHO05D006786 7.8e-139 497.7 447 61.5
FAN06G2729 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.0e-138 497.3 479 58.5
Migut.D00797 Erythranthe guttata HOM05D005018 ORTHO05D006786 1.7e-138 496.5 447 60.9
FAN10G3591 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.7e-138 496.5 479 58.5
VMungo0251G2317 Vigna mungo HOM05D005018 ORTHO05D006786 3.0e-138 495.7 447 61.5
AT2G13440 Arabidopsis thaliana HOM05D005018 ORTHO05D006786 5.1e-138 495.0 449 60.6
CARHR104850 Cardamine hirsuta HOM05D005018 ORTHO05D006786 5.1e-138 495.0 447 60.6
Carub.0003s2795 Capsella rubella HOM05D005018 ORTHO05D006786 1.1e-137 493.8 449 60.4
Nitab4.5_0000316g0160 Nicotiana tabacum HOM05D005018 ORTHO05D006786 1.5e-137 493.4 447 61.1
FAN03G0747 Fragaria x ananassa HOM05D005018 ORTHO05D006786 2.5e-137 492.7 479 58.0
Lsat_1_v5_gn_3_126721 Lactuca sativa HOM05D005018 ORTHO05D006786 7.3e-137 491.1 447 60.6
Oeu006102.4 Olea europaea HOM05D005018 ORTHO05D006786 9.6e-137 490.7 447 60.2
Sp3g26900 Schrenkiella parvula HOM05D005018 ORTHO05D006786 9.6e-137 490.7 449 60.4
AL3G45320 Arabidopsis lyrata HOM05D005018 ORTHO05D006786 1.2e-136 490.3 449 60.1
BcaB08g34530 Brassica carinata HOM05D005018 ORTHO05D006786 1.6e-136 490.0 449 60.1
Os01g0960300 Oryza sativa ssp. japonica HOM05D005018 ORTHO05D006786 1.6e-136 490.0 446 59.9
Hund28182 Selenicereus undatus HOM05D005018 ORTHO05D006786 3.6e-136 488.8 507 55.0
Hund28185 Selenicereus undatus HOM05D005018 ORTHO05D006786 3.6e-136 488.8 507 55.0
Aa31sc255G10 Aethionema arabicum HOM05D005018 ORTHO05D006786 6.2e-136 488.0 456 59.2
BcaC01g03124 Brassica carinata HOM05D005018 ORTHO05D006786 8.1e-136 487.6 449 60.1
C03p55820 Brassica napus HOM05D005018 ORTHO05D006786 8.1e-136 487.6 449 60.1
MSTRG.21275 Avicennia marina HOM05D005018 ORTHO05D006786 1.1e-135 487.3 447 60.2
A03p44940 Brassica napus HOM05D005018 ORTHO05D006786 1.1e-135 487.3 449 59.7
Sabra05G0054700 Salix brachista HOM05D005018 ORTHO05D006786 1.4e-135 486.9 482 57.5
Thhalv10022575m.g Eutrema salsugineum HOM05D005018 ORTHO05D006786 3.1e-135 485.7 448 59.8
ECA240G3046 Erigeron canadensis HOM05D005018 ORTHO05D006786 4.0e-135 485.3 447 60.0
SGA_v2.0_scaffold5G02934 Striga asiatica HOM05D005018 ORTHO05D006786 4.0e-135 485.3 487 56.5
HanXRQChr03g0092941 Helianthus annuus HOM05D005018 ORTHO05D006786 3.4e-134 482.3 447 59.3
BolC3t17863H Brassica oleracea HOM05D005018 ORTHO05D006786 4.4e-134 481.9 461 58.6
BraA03t13631Z Brassica rapa HOM05D005018 ORTHO05D006786 1.3e-133 480.3 467 57.6
ATR0730G013 Amborella trichopoda HOM05D005018 ORTHO05D006786 1.4e-132 476.9 448 58.0
Oeu026685.1 Olea europaea HOM05D005018 ORTHO05D006786 4.3e-129 465.3 520 52.1
HPP92_016130 Vanilla planifolia HOM05D005018 ORTHO05D006786 5.3e-127 458.4 447 56.2
Phvul.002G274000 Phaseolus vulgaris HOM05D005018 ORTHO05D006786 1.3e-120 437.2 407 60.0
Pp3c16_24810 Physcomitrium patens HOM05D005018 ORTHO05D006786 8.4e-117 424.5 448 52.0
unitig_0.g220 Utricularia gibba HOM05D005018 ORTHO05D006786 1.4e-116 423.7 423 56.7
CBR_g18682 Chara braunii HOM05D005018 ORTHO05D006786 2.4e-116 422.9 449 52.6
Mapoly0069s0053 Marchantia polymorpha HOM05D005018 ORTHO05D006786 3.2e-116 422.5 452 52.4
Eucgr.I00131 Eucalyptus grandis HOM05D005018 ORTHO05D006786 2.4e-111 406.4 349 65.3
vmacro23145 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 4.0e-111 405.6 391 59.8
SMO139G0120 Selaginella moellendorffii HOM05D005018 ORTHO05D006786 2.2e-109 399.8 444 51.6
GSVIVG01026449001 Vitis vinifera HOM05D005018 ORTHO05D006786 4.9e-109 398.7 270 74.4
PGSC0003DMG400006748 Solanum tuberosum HOM05D005018 ORTHO05D006786 1.3e-104 384.0 270 72.6
Prupe.5G002000 Prunus persica HOM05D005018 ORTHO05D006786 3.7e-104 382.5 349 61.6
Atru.chr4.947 Acer truncatum HOM05D005018 ORTHO05D006786 2.4e-103 379.8 349 61.0
Ah.06g190950 Amaranthus hybridus HOM05D005018 ORTHO05D006786 8.7e-98 361.3 382 55.5
Cre10.g428678 Chlamydomonas reinhardtii HOM05D005018 ORTHO05D006786 1.9e-97 360.1 449 47.7
Zm00001eb140420 Zea mays HOM05D005018 ORTHO05D006786 5.7e-97 358.6 264 68.9
AUR62000506 Chenopodium quinoa HOM05D005018 ORTHO05D006786 2.2e-88 330.1 231 73.2
MCO09G341 Micromonas commoda HOM05D005018 ORTHO05D006786 5.9e-86 322.0 456 42.5
Ciclev10003172m.g Citrus clementina HOM05D005018 ORTHO05D006786 4.7e-83 312.4 285 61.1
PRCOL_00006684 Prasinoderma coloniale HOM05D005018 ORTHO05D006786 8.8e-82 308.1 464 42.5
Nitab4.5_0006307g0020 Nicotiana tabacum HOM05D005018 ORTHO05D006786 4.4e-81 305.8 285 60.0
BolC8t48115H Brassica oleracea HOM05D005018 ORTHO05D006786 2.1e-67 260.4 252 54.8
MD07G1060500 Malus domestica HOM05D005018 ORTHO05D006786 2.7e-67 260.0 245 59.2
Haze_25310 Corylus avellana HOM05D005018 ORTHO05D006786 3.4e-65 253.1 253 55.3
BcaC07g37734 Brassica carinata HOM05D005018 ORTHO05D006786 2.8e-64 250.0 247 53.8
Cpa.g.sc1441.1 Carica papaya HOM05D005018 ORTHO05D006786 1.8e-63 247.3 169 76.3
AagrBONN_evm.TU.Sc2ySwM_344.2451 Anthoceros agrestis HOM05D005018 ORTHO05D006786 3.6e-59 233.0 256 52.7
Ciclev10002140m.g Citrus clementina HOM05D005018 ORTHO05D006786 7.5e-57 225.3 147 76.2
Cfa023424 Carpinus fangiana HOM05D005018 ORTHO05D006786 2.3e-42 177.2 432 29.6
SEGI_07875 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 6.8e-42 175.6 148 58.8
Haze_26929 Corylus avellana HOM05D005018 ORTHO05D006786 3.4e-41 173.3 432 30.3
Cpa.g.sc42.187 Carica papaya HOM05D005018 ORTHO05D006786 7.8e-38 162.2 91 87.9
MCO09G386 Micromonas commoda HOM05D005018 ORTHO05D006786 1.4e-34 151.4 474 28.1
Haze_26659 Corylus avellana HOM05D005018 ORTHO05D006786 5.8e-33 146.0 319 32.3
Zm00001eb292630 Zea mays HOM05D005018 ORTHO05D006786 1.7e-29 134.4 100 65.0
Haze_25309 Corylus avellana HOM05D005018 ORTHO05D006786 2.3e-29 134.0 85 77.6
Haze_25306 Corylus avellana HOM05D005018 ORTHO05D000965 6.6e-29 132.5 124 62.1
Zm00001eb074000 Zea mays HOM05D005018 ORTHO05D006786 2.8e-27 127.1 94 67.0
Haze_18329 Corylus avellana HOM05D001982 ORTHO05D008035 1.7e-16 91.3 61 70.5
SEGI_06865 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 3.8e-16 90.1 91 53.8
SMO139G0025 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 3.0e-13 80.5 167 39.5
SMO157G0012 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 5.6e-12 76.3 54 70.4
Haze_18314 Corylus avellana HOM05D005018 ORTHO05D006786 2.2e-08 64.3 91 41.8


User provided reference genes

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