Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 2.4e-187 658.7 337 100.0
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 1.2e-120 437.2 338 66.0
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 8.6e-116 421.0 338 62.4
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 8.0e-114 414.5 335 63.6
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 5.2e-113 411.8 333 64.0
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 2.9e-111 406.0 337 61.7
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 1.1e-107 394.0 334 59.0
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 1.5e-107 393.7 339 61.1
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 5.6e-107 391.7 336 60.1
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 1.6e-106 390.2 333 59.2
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 4.7e-106 388.7 322 62.1
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 3.1e-105 386.0 334 58.7
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 2.0e-104 383.3 336 58.3
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 2.9e-103 379.4 338 59.8
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 1.4e-102 377.1 335 60.0
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 1.0e-100 370.9 339 56.3
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 1.7e-100 370.2 350 56.9
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 1.1e-99 367.5 339 58.1
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 4.3e-99 365.5 359 57.7
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 1.2e-98 364.0 337 57.9
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 4.4e-96 355.5 337 56.4
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 7.5e-96 354.8 338 54.7
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 1.3e-95 354.0 336 57.7
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 2.2e-95 353.2 336 54.8
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 2.9e-95 352.8 337 55.8
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 3.7e-95 352.4 337 54.0
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 4.9e-95 352.1 337 55.5
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 8.3e-95 351.3 345 56.8
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 1.1e-94 350.9 337 55.5
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 1.9e-94 350.1 326 55.8
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 1.9e-94 350.1 336 57.4
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 2.4e-94 349.7 332 54.5
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 3.2e-94 349.4 333 55.0
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 1.6e-93 347.1 335 57.3
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 1.6e-93 347.1 336 57.1
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 4.6e-93 345.5 332 53.3
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 7.8e-93 344.7 317 57.7
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 1.3e-92 344.0 336 55.4
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 1.3e-92 344.0 332 54.5
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 1.7e-92 343.6 333 53.8
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 3.0e-92 342.8 340 56.2
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 6.6e-92 341.7 335 57.0
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 5.6e-91 338.6 336 54.8
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 9.5e-91 337.8 334 56.3
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 2.1e-90 336.7 381 49.9
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 2.1e-90 336.7 338 53.0
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 2.8e-90 336.3 342 54.7
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 3.6e-90 335.9 335 54.3
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.8e-89 333.6 333 53.8
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 6.8e-89 331.6 340 53.8
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 6.8e-89 331.6 333 53.5
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 6.8e-89 331.6 333 53.8
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 2.6e-88 329.7 345 53.3
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 1.7e-87 327.0 359 49.6
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.2e-87 326.6 334 53.6
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 3.7e-87 325.9 332 52.4
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 6.4e-87 325.1 349 53.3
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 3.2e-86 322.8 328 51.5
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 1.6e-85 320.5 367 49.6
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 1.6e-85 320.5 348 50.9
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 7.8e-85 318.2 280 59.6
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 4.3e-83 312.4 335 51.0
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 8.1e-82 308.1 328 49.7
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 1.5e-80 303.9 337 51.6
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 3.4e-80 302.8 335 51.3
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 6.4e-79 298.5 330 50.0
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 2.4e-78 296.6 309 50.8
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 7.1e-78 295.0 341 50.1
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 1.6e-77 293.9 351 48.7
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 2.1e-77 293.5 334 51.8
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 1.1e-75 287.7 347 49.0
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 1.9e-75 287.0 317 49.5
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 4.3e-75 285.8 329 51.4
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 4.3e-75 285.8 336 48.8
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 5.6e-75 285.4 205 68.3
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 7.3e-75 285.0 345 49.6
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.8e-74 283.1 295 54.9
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 1.2e-72 277.7 334 49.7
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 2.0e-72 276.9 341 47.5
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.2e-69 267.7 237 58.2
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 1.6e-69 267.3 345 46.7
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 1.6e-69 267.3 355 44.8
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 2.1e-69 266.9 278 53.6
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 3.5e-69 266.2 335 47.8
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 3.5e-69 266.2 335 47.8
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 6.0e-69 265.4 355 44.8
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 1.3e-68 264.2 264 51.5
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 1.7e-68 263.8 332 46.1
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 2.3e-68 263.5 347 45.5
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 3.9e-68 262.7 334 47.0
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 8.7e-68 261.5 254 57.1
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 8.7e-68 261.5 336 47.3
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 1.1e-67 261.2 329 47.4
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 4.3e-67 259.2 334 48.2
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 5.6e-67 258.8 334 45.8
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 9.6e-67 258.1 334 46.4
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 9.6e-67 258.1 295 47.8
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 4.8e-66 255.8 233 56.7
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 3.4e-64 249.6 361 44.3
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 9.9e-64 248.1 245 53.5
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.3e-63 247.7 257 52.9
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 4.2e-62 242.7 239 53.6
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 6.0e-61 238.8 272 48.5
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 1.9e-59 233.8 239 51.5
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 1.9e-59 233.8 197 57.4
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 1.1e-54 218.0 218 56.4
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.5e-53 213.0 227 49.8
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 1.0e-52 211.5 201 53.7
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 1.8e-52 210.7 209 50.7
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 1.6e-50 204.1 226 47.8
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.0e-47 194.9 226 46.9
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.9e-46 190.7 229 45.4
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 7.2e-46 188.7 204 48.5
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 7.9e-45 185.3 207 46.4
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 1.5e-43 181.0 198 51.5
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.5e-43 180.3 208 47.6
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 4.8e-42 176.0 158 54.4
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 5.5e-38 162.5 138 60.1
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 1.6e-37 161.0 199 42.2
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 7.9e-37 158.7 143 56.6
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 1.3e-31 141.4 126 55.6
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 1.9e-30 137.5 180 42.8
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 5.5e-22 109.4 87 69.0
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 5.5e-22 109.4 80 70.0
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 1.2e-16 91.7 201 34.3
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 9.5e-06 55.5 57 54.4


User provided reference genes

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