Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 1.7e-263 912.1 465 100.0
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 7.9e-144 514.6 301 84.4
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 1.7e-143 513.5 298 84.6
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 1.7e-143 513.5 299 84.3
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 3.0e-143 512.7 298 84.9
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 3.9e-143 512.3 299 83.9
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 8.7e-143 511.1 299 83.6
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 4.3e-142 508.8 300 84.7
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 1.3e-141 507.3 298 83.6
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 2.1e-141 506.5 298 83.9
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 8.1e-141 504.6 298 83.2
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 4.0e-140 502.3 299 82.6
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 5.3e-140 501.9 298 81.9
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 2.6e-139 499.6 298 82.2
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 7.6e-139 498.0 298 82.2
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 9.9e-139 497.7 298 79.9
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 1.7e-138 496.9 309 80.6
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 1.7e-138 496.9 298 81.5
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 1.7e-138 496.9 299 81.9
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 6.4e-138 495.0 298 82.6
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 1.9e-137 493.4 331 75.2
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 2.4e-137 493.0 298 82.2
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 3.2e-137 492.7 298 81.9
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 2.1e-136 490.0 300 80.7
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 2.1e-136 490.0 298 80.5
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 2.1e-136 490.0 299 81.9
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 7.9e-136 488.0 304 79.9
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 1.0e-135 487.6 299 81.3
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 1.8e-135 486.9 298 79.5
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 1.8e-135 486.9 300 81.0
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 2.3e-135 486.5 298 80.2
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 3.9e-135 485.7 298 80.2
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 8.7e-135 484.6 298 79.9
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 1.9e-134 483.4 298 80.2
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 3.3e-134 482.6 297 78.1
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 4.3e-134 482.3 301 80.7
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 1.6e-133 480.3 298 79.5
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 2.1e-133 479.9 304 78.3
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 3.7e-133 479.2 329 74.2
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 3.7e-133 479.2 299 79.6
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 4.8e-133 478.8 298 79.2
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 6.2e-133 478.4 299 79.9
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 1.1e-132 477.6 298 78.2
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 1.4e-132 477.2 298 78.5
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 3.1e-132 476.1 302 79.1
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 4.0e-132 475.7 298 78.9
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 4.0e-132 475.7 301 78.1
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 6.9e-132 474.9 298 79.2
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 1.5e-131 473.8 300 78.0
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 2.0e-131 473.4 299 77.9
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 2.0e-131 473.4 293 79.5
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 2.0e-131 473.4 299 77.3
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 3.4e-131 472.6 298 76.5
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 4.5e-131 472.2 298 77.9
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 5.8e-131 471.9 294 78.6
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 5.8e-131 471.9 299 77.3
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 7.6e-131 471.5 297 78.5
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 1.0e-130 471.1 295 77.6
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 1.0e-130 471.1 297 75.8
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 1.3e-130 470.7 303 76.2
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 1.7e-130 470.3 282 82.3
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 2.9e-130 469.5 299 77.9
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 1.1e-129 467.6 302 76.8
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 2.5e-129 466.5 281 82.6
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 4.2e-129 465.7 298 75.8
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 4.2e-129 465.7 298 75.5
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 1.6e-128 463.8 300 76.3
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 4.6e-128 462.2 332 71.7
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 7.9e-128 461.5 298 75.5
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 3.0e-127 459.5 298 76.2
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 6.7e-127 458.4 291 76.6
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 1.5e-126 457.2 300 77.0
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 4.3e-126 455.7 298 74.2
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 9.6e-126 454.5 291 76.3
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 1.3e-125 454.1 291 75.9
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 2.8e-125 453.0 291 76.3
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 2.8e-125 453.0 291 76.3
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 2.8e-125 453.0 291 76.3
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 2.8e-125 453.0 294 74.5
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 6.3e-125 451.8 298 73.5
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 1.2e-123 447.6 239 90.8
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 4.5e-123 445.7 297 76.1
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 1.0e-122 444.5 298 74.5
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 1.9e-121 440.3 311 72.0
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 2.5e-121 439.9 268 83.6
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 9.3e-121 438.0 250 83.6
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 2.3e-119 433.3 238 87.0
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 3.0e-119 433.0 279 78.5
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 3.9e-119 432.6 294 72.8
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 6.9e-116 421.8 269 75.8
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 7.7e-115 418.3 319 65.8
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 5.5e-113 412.1 291 70.4
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 1.4e-111 407.5 221 88.2
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 1.8e-111 407.1 247 81.4
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 8.8e-111 404.8 267 74.2
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 4.3e-110 402.5 242 80.2
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 5.0e-98 362.5 237 74.7
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 7.5e-94 348.6 293 59.4
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 1.6e-91 340.9 287 60.6
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 7.7e-91 338.6 294 58.5
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 5.9e-83 312.4 208 74.0
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 2.9e-82 310.1 410 46.6
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 2.1e-80 303.9 282 61.3
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 1.5e-65 254.6 279 50.9
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 8.9e-63 245.4 258 57.0
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 1.7e-58 231.1 153 76.5
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 8.1e-56 222.2 286 42.7
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 3.4e-54 216.9 259 44.0
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 3.2e-52 210.3 120 84.2
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 1.8e-47 194.5 117 72.6
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 4.0e-47 193.4 204 51.0
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 6.4e-45 186.0 224 50.0
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 5.6e-41 172.9 175 57.7
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 1.7e-34 151.4 232 42.2
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 4.8e-32 143.3 111 63.1
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 5.4e-28 129.8 73 83.6
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 7.9e-27 125.9 82 76.8
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 2.1e-19 101.3 52 90.4
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 3.9e-18 97.1 54 83.3
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 4.3e-17 93.6 60 80.0
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 4.8e-16 90.1 52 78.8
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 2.4e-15 87.8 190 35.8
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 4.0e-15 87.0 55 78.2
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 1.0e-13 82.4 58 74.1
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 1.3e-13 82.0 59 66.1
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 1.9e-12 78.2 133 35.3
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 9.6e-09 65.9 167 30.5
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 2.1e-08 64.7 175 30.9
MCO01G455 Micromonas commoda HOM05D016613 ORTHO05D014817 1.4e-07 62.0 166 30.7
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 1.8e-07 61.6 183 29.5
ClCG05G021840 Citrullus lanatus HOM05D005598 ORTHO05D006587 2.4e-07 61.2 83 45.8
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 1.5e-06 58.5 59 52.5
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 2.0e-06 58.2 83 44.6
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 2.6e-06 57.8 33 75.8
SMO118G0286 Selaginella moellendorffii HOM05D016613 ORTHO05D014817 5.9e-06 56.6 170 28.2


User provided reference genes

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