Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02401 Eucalyptus grandis HOM05D003438 ORTHO05D004235 8.2e-82 307.0 154 100.0
TWI75G0189 Tripterygium wilfordii HOM05D003438 ORTHO05D004235 2.1e-45 186.0 135 70.4
CANSAT64G0670 Cannabis sativa HOM05D003438 ORTHO05D004235 4.7e-45 184.9 150 61.3
PGR119G1138 Punica granatum HOM05D003438 ORTHO05D004235 1.4e-44 183.3 138 65.2
Cfa008813 Carpinus fangiana HOM05D003438 ORTHO05D004235 4.0e-44 181.8 146 62.3
Sed0018972 Sechium edule HOM05D003438 ORTHO05D004235 4.0e-44 181.8 135 65.9
Haze_11830 Corylus avellana HOM05D003438 ORTHO05D004235 6.8e-44 181.0 146 62.3
QL03p047190 Quercus lobata HOM05D003438 ORTHO05D004235 1.2e-43 180.3 146 65.1
Cfa008819 Carpinus fangiana HOM05D003438 ORTHO05D004235 1.5e-43 179.9 142 63.4
RcHm_v2.0_Chr4g0436931 Rosa chinensis HOM05D003438 ORTHO05D004235 3.4e-43 178.7 148 59.5
Prupe.1G298000 Prunus persica HOM05D003438 ORTHO05D004235 5.8e-43 177.9 146 61.0
Ciclev10030492m.g Citrus clementina HOM05D003438 ORTHO05D004235 1.7e-42 176.4 145 62.8
Aa31sc12G150 Aethionema arabicum HOM05D003438 ORTHO05D004235 2.2e-42 176.0 147 61.2
CsaV3_5G033620 Cucumis sativus L. HOM05D003438 ORTHO05D004235 2.9e-42 175.6 144 60.4
THA.LOC104821983 Tarenaya hassleriana HOM05D003438 ORTHO05D004235 3.7e-42 175.3 147 57.8
MELO3C012178.2 Cucumis melo HOM05D003438 ORTHO05D004235 8.3e-42 174.1 136 61.8
Manes.14G092500 Manihot esculenta HOM05D003438 ORTHO05D004235 8.3e-42 174.1 148 63.5
CiPaw.05G119100 Carya illinoinensis HOM05D003438 ORTHO05D004235 1.1e-41 173.7 141 58.9
Thecc.02G318900 Theobroma cacao HOM05D003438 ORTHO05D004235 1.4e-41 173.3 146 65.1
Cpa.g.sc570.4 Carica papaya HOM05D003438 ORTHO05D004235 1.9e-41 172.9 146 61.6
FAN17G0827 Fragaria x ananassa HOM05D003438 ORTHO05D004235 2.4e-41 172.6 148 59.5
FAN07G2974 Fragaria x ananassa HOM05D003438 ORTHO05D004235 2.1e-40 169.5 148 58.8
FvH4_4g28800 Fragaria vesca HOM05D003438 ORTHO05D004235 2.7e-40 169.1 148 58.8
FAN12G2600 Fragaria x ananassa HOM05D003438 ORTHO05D004235 2.7e-40 169.1 148 58.8
ClCG05G023390 Citrullus lanatus HOM05D003438 ORTHO05D004235 4.6e-40 168.3 144 57.6
COL.COLO4_27762 Corchorus olitorius HOM05D003438 ORTHO05D004235 6.0e-40 167.9 128 69.5
Duzib251G0072 Durio zibethinus HOM05D003438 ORTHO05D004235 6.0e-40 167.9 147 62.6
MD16G1052600 Malus domestica HOM05D003438 ORTHO05D004235 1.7e-39 166.4 138 58.7
Thhalv10017999m.g Eutrema salsugineum HOM05D003438 ORTHO05D004235 3.0e-39 165.6 147 57.1
Carub.0002s1550 Capsella rubella HOM05D003438 ORTHO05D004235 1.5e-38 163.3 147 59.9
Dinv16579 Davidia involucrata HOM05D003438 ORTHO05D004235 1.9e-38 162.9 127 65.4
Dinv16582 Davidia involucrata HOM05D003438 ORTHO05D004235 2.5e-38 162.5 127 65.4
AT1G68890 Arabidopsis thaliana HOM05D003438 ORTHO05D004235 5.6e-38 161.4 146 56.8
Gohir.A03G107450 Gossypium hirsutum HOM05D003438 ORTHO05D004235 2.1e-37 159.5 133 63.9
Gorai.005G148400 Gossypium raimondii HOM05D003438 ORTHO05D004235 6.2e-37 157.9 125 65.6
Ca_22511_v3 Cicer arietinum L. HOM05D003438 ORTHO05D004235 1.4e-36 156.8 147 55.8
Potri.010G135500 Populus trichocarpa HOM05D003438 ORTHO05D004235 3.1e-36 155.6 144 59.0
Gohir.D02G132532 Gossypium hirsutum HOM05D003438 ORTHO05D004235 5.2e-36 154.8 109 71.6
A02p15460 Brassica napus HOM05D003438 ORTHO05D004235 8.9e-36 154.1 135 60.0
Lj4g0011234 Lotus japonicus HOM05D003438 ORTHO05D004235 8.9e-36 154.1 144 55.6
MSTRG.795 Avicennia marina HOM05D003438 ORTHO05D004235 1.2e-35 153.7 123 62.6
Medtr8g069840 Medicago truncatula HOM05D003438 ORTHO05D004235 4.4e-35 151.8 145 55.9
Actinidia30181 Actinidia chinensis HOM05D003438 ORTHO05D004235 5.8e-35 151.4 123 63.4
arahy.Tifrunner.gnm1.ann1.2XHE7W Arachis hypogaea HOM05D003438 ORTHO05D004235 5.8e-35 151.4 148 53.4
BraA02t06607Z Brassica rapa HOM05D003438 ORTHO05D004235 7.6e-35 151.0 135 58.5
arahy.Tifrunner.gnm1.ann1.KJ79M0 Arachis hypogaea HOM05D003438 ORTHO05D004235 9.9e-35 150.6 147 53.1
CSS0008902 Camellia sinensis var. sinensis HOM05D003438 ORTHO05D004235 9.9e-35 150.6 126 61.1
BcaB05g24430 Brassica carinata HOM05D003438 ORTHO05D004235 1.9e-33 146.4 140 55.7
Sabra10G0104000 Salix brachista HOM05D003438 ORTHO05D004235 1.9e-33 146.4 131 59.5
Hma1.2p1_0762F.1_g214430 Hydrangea macrophylla HOM05D003438 ORTHO05D004235 3.2e-33 145.6 123 61.8
SGA_v2.0_scaffold16G07841 Striga asiatica HOM05D003438 ORTHO05D004235 4.1e-33 145.2 122 54.9
Lalb_Chr16g0392031 Lupinus albus HOM05D003438 ORTHO05D004235 7.1e-33 144.4 127 56.7
C02p25570 Brassica napus HOM05D003438 ORTHO05D004235 1.2e-32 143.7 151 53.0
BolC2t08622H Brassica oleracea HOM05D003438 ORTHO05D004235 1.2e-32 143.7 143 54.5
BcaC03g15011 Brassica carinata HOM05D003438 ORTHO05D004235 2.1e-32 142.9 147 51.7
Nitab4.5_0000149g0210 Nicotiana tabacum HOM05D003438 ORTHO05D004235 2.7e-32 142.5 118 63.6
Lj3C1025G4 Lonicera japonica HOM05D003438 ORTHO05D004235 3.5e-32 142.1 140 54.3
Solyc04g005180.4 Solanum lycopersicum HOM05D003438 ORTHO05D004235 3.0e-31 139.0 118 58.5
Cc11_g11300 Coffea canephora HOM05D003438 ORTHO05D004235 5.1e-31 138.3 128 55.5
Migut.L01140 Erythranthe guttata HOM05D003438 ORTHO05D004235 1.1e-30 137.1 104 64.4
Nitab4.5_0000591g0090 Nicotiana tabacum HOM05D003438 ORTHO05D004235 1.5e-30 136.7 118 61.9
AUR62007840 Chenopodium quinoa HOM05D003438 ORTHO05D004235 1.9e-30 136.3 124 56.5
SalBow8G3833 Salvia bowleyana HOM05D003438 ORTHO05D004235 4.3e-30 135.2 126 56.3
TAR629G1044 Trochodendron aralioides HOM05D003438 ORTHO05D004235 1.6e-29 133.3 125 57.6
CAN.G822.4 Capsicum annuum HOM05D003438 ORTHO05D004235 3.6e-29 132.1 118 58.5
Sc04g0007220 Simmondsia chinensis HOM05D003438 ORTHO05D004235 2.4e-28 129.4 120 54.2
AUR62003033 Chenopodium quinoa HOM05D003438 ORTHO05D004235 4.0e-28 128.6 124 52.4
GSVIVG01010143001 Vitis vinifera HOM05D003438 ORTHO05D004235 3.4e-27 125.6 129 54.3
Ah.12g061020 Amaranthus hybridus HOM05D003438 ORTHO05D004235 1.3e-26 123.6 112 53.6
Ah.12g061030 Amaranthus hybridus HOM05D003438 ORTHO05D004235 1.3e-26 123.6 112 53.6
Rhsim09G0118400 Rhododendron simsii HOM05D003438 ORTHO05D004235 3.8e-26 122.1 123 56.1
Hund25139 Selenicereus undatus HOM05D003438 ORTHO05D004235 1.9e-25 119.8 111 56.8
Glyma.15G276800 Glycine max HOM05D003438 ORTHO05D004235 3.2e-25 119.0 147 48.3
Phvul.005G022900 Phaseolus vulgaris HOM05D003438 ORTHO05D004235 4.2e-25 118.6 129 50.4
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 9.3e-25 117.5 123 52.8
DCAR_023734 Daucus carota HOM05D003438 ORTHO05D004235 7.8e-24 114.4 119 50.4
unitig_699.g19901 Utricularia gibba HOM05D003438 ORTHO05D004235 1.0e-23 114.0 112 52.7
MBI14_g11750_MAGBIO Magnolia biondii HOM05D003438 ORTHO05D004235 6.6e-23 111.3 126 47.6
PSO478G2917 Papaver somniferum HOM05D003438 ORTHO05D004235 4.3e-22 108.6 123 48.0
HanXRQChr16g0528311 Helianthus annuus HOM05D003438 ORTHO05D004235 9.6e-22 107.5 126 47.6
ECA234G3211 Erigeron canadensis HOM05D003438 ORTHO05D004235 2.1e-21 106.3 126 46.0
Lsat_1_v5_gn_4_21341 Lactuca sativa HOM05D003438 ORTHO05D004235 2.1e-21 106.3 147 42.9
PSO017G4740 Papaver somniferum HOM05D003438 ORTHO05D004235 3.6e-21 105.5 123 47.2
Nn4g23587 Nelumbo nucifera HOM05D003438 ORTHO05D004235 6.2e-21 104.8 111 50.5
Peaxi162Scf00396g01322 Petunia axillaris HOM05D003438 ORTHO05D004235 4.0e-20 102.1 118 50.0
Glyma.01G000322 Glycine max HOM05D003438 ORTHO05D004235 9.0e-20 100.9 112 49.1
Glyma.15G277502 Glycine max HOM05D003438 ORTHO05D004235 1.3e-18 97.1 112 48.2
Atru.chr11.1518 Acer truncatum HOM05D003438 ORTHO05D004235 6.4e-18 94.7 82 59.8
HPP92_019428 Vanilla planifolia HOM05D003438 ORTHO05D004235 2.4e-17 92.8 126 41.3
Os02g0581400 Oryza sativa ssp. japonica HOM05D003438 ORTHO05D004235 7.9e-16 87.8 133 42.1
CDE02G4531 Ceratophyllum demersum HOM05D003438 ORTHO05D004235 1.0e-15 87.4 142 39.4
ATR0691G173 Amborella trichopoda HOM05D003438 ORTHO05D004235 9.6e-14 80.9 131 38.9
MD13G1054200 Malus domestica HOM05D003438 ORTHO05D022225 8.1e-13 77.8 68 55.9
SEGI_10147 Sequoiadendron giganteum HOM05D003553 ORTHO05D005072 4.0e-12 75.5 120 35.0
SEGI_27806 Sequoiadendron giganteum HOM05D003553 ORTHO05D005072 4.0e-12 75.5 120 35.0
Cpa.g.sc48.236 Carica papaya HOM05D003438 ORTHO05D022225 2.6e-11 72.8 68 51.5
Cpa.g.sc878.3 Carica papaya HOM05D003438 ORTHO05D022225 2.6e-11 72.8 68 51.5
Glyma.U045802 Glycine max HOM05D003438 ORTHO05D004235 2.2e-10 69.7 74 47.3
Hund26920 Selenicereus undatus HOM05D003553 ORTHO05D005072 9.3e-09 64.3 134 29.9
Cpa.g.sc179.55 Carica papaya HOM05D003438 ORTHO05D022225 8.7e-07 57.8 50 60.0


User provided reference genes

Program Settings