Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 7.7e-194 680.2 332 100.0
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 1.1e-152 543.5 333 77.5
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 3.6e-143 511.9 314 77.1
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 2.4e-142 509.2 335 73.4
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 2.4e-142 509.2 330 73.3
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 5.2e-142 508.1 329 73.9
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 1.2e-141 506.9 337 73.6
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 2.0e-141 506.1 329 73.3
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 1.7e-140 503.1 327 73.4
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 2.9e-140 502.3 314 75.8
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 6.4e-140 501.1 336 72.0
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.6e-138 496.5 332 73.2
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 4.6e-138 495.0 335 72.5
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 3.0e-137 492.3 330 72.1
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 3.9e-137 491.9 330 72.1
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 5.1e-137 491.5 329 71.7
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 6.6e-137 491.1 328 72.0
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 6.6e-137 491.1 332 72.6
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 6.6e-137 491.1 308 75.6
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 2.5e-136 489.2 330 72.7
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 2.5e-136 489.2 331 71.0
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 5.6e-136 488.0 332 72.6
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 5.6e-136 488.0 330 70.9
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 2.1e-135 486.1 305 75.4
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 2.8e-135 485.7 321 72.6
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 8.1e-135 484.2 329 71.7
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 1.8e-134 483.0 326 71.8
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 2.4e-134 482.6 328 72.0
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 6.9e-134 481.1 330 70.9
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 9.0e-134 480.7 334 69.5
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.2e-133 480.3 330 71.2
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 2.0e-133 479.6 330 70.0
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 2.0e-133 479.6 334 70.4
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 3.4e-133 478.8 334 68.9
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 7.6e-133 477.6 331 70.4
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 9.9e-133 477.2 326 71.5
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 9.9e-133 477.2 326 70.6
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 2.2e-132 476.1 328 68.6
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 6.4e-132 474.6 312 73.4
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 8.4e-132 474.2 327 68.8
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 2.4e-131 472.6 324 69.4
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 4.2e-131 471.9 331 70.1
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 9.3e-131 470.7 335 69.6
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 1.6e-130 469.9 329 69.9
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 1.6e-130 469.9 328 69.8
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 4.6e-130 468.4 328 68.9
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 4.6e-130 468.4 328 67.7
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 6.0e-130 468.0 324 67.9
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 1.3e-129 466.8 328 67.7
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 1.8e-129 466.5 303 72.9
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 6.7e-129 464.5 308 73.1
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 6.7e-129 464.5 308 71.4
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 4.3e-128 461.8 308 71.1
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 2.1e-127 459.5 352 65.6
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 6.9e-126 454.5 329 67.5
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.2e-125 453.8 280 75.0
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.6e-125 452.6 272 77.2
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 3.4e-125 452.2 328 66.5
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 4.5e-125 451.8 269 78.4
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 1.7e-124 449.9 308 71.4
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 4.9e-124 448.4 316 69.6
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 1.1e-123 447.2 324 65.4
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 1.4e-123 446.8 311 68.5
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 3.2e-123 445.7 313 69.6
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 7.1e-123 444.5 312 68.9
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 2.7e-122 442.6 317 65.9
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 7.9e-122 441.0 335 66.3
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 7.9e-122 441.0 333 66.4
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 1.0e-121 440.7 335 66.3
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 1.0e-121 440.7 308 69.5
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.0e-121 440.7 316 67.7
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 1.1e-120 437.2 306 68.6
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 3.3e-120 435.6 272 74.6
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 4.3e-120 435.3 315 68.3
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 7.4e-120 434.5 305 69.5
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 7.4e-120 434.5 305 69.5
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 1.3e-119 433.7 306 67.6
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 2.1e-119 433.0 329 66.9
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 3.7e-119 432.2 247 80.2
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 6.2e-119 431.4 314 65.6
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 8.2e-119 431.0 314 66.2
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 3.1e-118 429.1 305 68.5
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 3.1e-118 429.1 305 68.5
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 4.0e-118 428.7 305 68.5
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 4.0e-118 428.7 258 76.4
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 5.3e-118 428.3 324 65.7
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 6.9e-118 427.9 314 66.2
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 6.9e-118 427.9 327 67.0
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 4.5e-117 425.2 316 66.1
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 2.7e-114 416.0 231 84.4
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 8.7e-113 411.0 332 61.4
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 8.7e-113 411.0 320 63.8
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.9e-112 409.8 314 64.3
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 5.7e-112 408.3 287 68.6
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 8.2e-111 404.4 308 64.9
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 1.0e-108 397.5 217 83.9
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 1.9e-107 393.3 241 76.3
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 2.8e-103 379.4 274 66.8
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 2.4e-94 349.7 307 58.0
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 2.0e-93 346.7 317 54.6
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 1.8e-89 333.6 233 65.7
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 4.5e-85 318.9 183 80.3
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 4.5e-85 318.9 183 80.3
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 7.2e-83 311.6 319 48.9
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 2.1e-82 310.1 240 63.8
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 1.0e-76 291.2 197 71.1
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 3.5e-69 266.2 216 56.5
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 3.6e-66 256.1 189 61.9
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 1.2e-61 241.1 150 76.7
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 4.3e-59 232.6 201 56.7
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 2.0e-40 170.6 201 44.3
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 9.5e-35 151.8 141 52.5
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 7.6e-32 142.1 78 83.3
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 1.6e-21 107.8 113 48.7
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.9e-19 100.9 59 79.7
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 2.1e-10 70.9 52 67.3
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 7.1e-06 55.8 164 27.4


User provided reference genes

Program Settings