Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 1.5e-180 636.0 303 100.0
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 4.2e-122 441.8 295 72.2
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 1.6e-121 439.9 275 73.5
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 1.6e-121 439.9 275 73.5
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 1.6e-121 439.9 275 73.5
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 6.1e-121 438.0 312 67.0
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 5.2e-120 434.9 304 67.1
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 6.7e-120 434.5 289 72.3
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 8.8e-120 434.1 290 71.4
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 2.0e-119 433.0 301 70.1
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 5.7e-119 431.4 290 71.0
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.3e-118 430.3 293 71.7
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 4.8e-118 428.3 291 70.8
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 4.8e-118 428.3 291 70.8
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 1.8e-117 426.4 290 69.7
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 3.1e-117 425.6 283 70.7
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 1.2e-116 423.7 324 67.9
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 2.6e-116 422.5 302 67.5
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 1.0e-115 420.6 298 68.8
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.2e-115 419.5 273 72.2
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 2.9e-115 419.1 283 71.4
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 1.9e-114 416.4 295 68.1
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 2.7e-113 412.5 289 67.8
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 3.6e-113 412.1 271 69.7
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.3e-112 409.5 270 70.0
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 2.3e-112 409.5 296 66.9
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 6.7e-112 407.9 270 68.9
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 6.7e-112 407.9 285 68.1
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 1.2e-111 407.1 315 64.1
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 1.2e-111 407.1 278 67.6
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 1.5e-111 406.8 297 67.0
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.5e-111 406.8 283 67.8
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 2.0e-111 406.4 290 66.9
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 2.0e-111 406.4 302 63.6
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 2.0e-111 406.4 299 64.5
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 2.6e-111 406.0 267 70.8
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 3.3e-111 405.6 290 65.9
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 7.5e-111 404.4 271 69.7
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 7.5e-111 404.4 309 62.1
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 9.7e-111 404.1 290 67.6
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 1.3e-110 403.7 308 64.0
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 2.8e-110 402.5 302 62.9
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 4.8e-110 401.7 276 67.4
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 4.8e-110 401.7 293 64.2
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 8.2e-110 401.0 302 62.9
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 1.4e-109 400.2 310 63.2
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 2.4e-109 399.4 284 65.8
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 7.0e-109 397.9 272 69.5
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 9.1e-109 397.5 305 63.0
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 1.6e-108 396.7 290 63.8
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 2.0e-108 396.4 298 64.8
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 3.5e-108 395.6 261 69.3
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 4.5e-108 395.2 302 63.6
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 4.5e-108 395.2 298 63.1
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 4.5e-108 395.2 233 77.3
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 4.5e-108 395.2 292 63.4
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 5.9e-108 394.8 304 69.1
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 5.9e-108 394.8 281 64.4
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 1.7e-107 393.3 303 62.4
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 2.2e-107 392.9 270 67.8
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 2.9e-107 392.5 271 67.5
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 6.5e-107 391.3 262 70.2
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 6.5e-107 391.3 281 64.4
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 1.5e-106 390.2 305 60.3
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 1.9e-106 389.8 286 66.8
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 3.2e-106 389.0 297 61.3
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 3.2e-106 389.0 301 61.8
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 4.2e-106 388.7 257 70.4
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 4.2e-106 388.7 311 60.8
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 9.4e-106 387.5 300 61.7
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 1.6e-105 386.7 294 61.6
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 4.7e-105 385.2 269 68.8
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 6.1e-105 384.8 232 75.0
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 8.0e-105 384.4 239 72.0
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 1.0e-104 384.0 294 62.9
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 1.4e-104 383.6 268 68.7
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 2.3e-104 382.9 270 65.9
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 5.2e-104 381.7 269 68.0
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 4.4e-103 378.6 283 65.4
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 9.8e-103 377.5 271 66.8
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 9.8e-103 377.5 271 66.8
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 9.8e-103 377.5 271 66.8
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 1.7e-102 376.7 274 66.1
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 2.2e-102 376.3 274 66.1
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.1e-101 374.0 274 64.2
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 1.4e-101 373.6 225 75.1
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 1.8e-101 373.2 259 66.8
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 3.1e-101 372.5 302 61.6
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 2.0e-100 369.8 274 62.0
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 2.3e-99 366.3 256 66.4
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 5.0e-99 365.2 301 59.5
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 8.6e-99 364.4 221 74.7
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 1.9e-98 363.2 297 59.6
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 2.1e-97 359.8 251 65.7
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 2.1e-97 359.8 301 59.1
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 4.7e-97 358.6 253 66.8
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 2.3e-96 356.3 311 56.6
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.2e-95 354.0 270 60.0
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 7.5e-95 351.3 271 61.3
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 7.5e-95 351.3 242 66.1
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 2.8e-94 349.4 237 65.8
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 1.4e-93 347.1 273 60.1
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 3.1e-93 345.9 219 70.8
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 7.0e-93 344.7 277 57.4
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 7.0e-93 344.7 274 59.9
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 1.0e-91 340.9 279 58.4
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.7e-91 340.1 304 53.3
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 2.3e-91 339.7 283 58.3
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 3.8e-91 339.0 231 64.1
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 6.6e-91 338.2 228 64.9
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 1.9e-90 336.7 232 65.9
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.9e-90 336.7 275 57.8
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 2.5e-90 336.3 245 63.3
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 7.3e-90 334.7 234 64.1
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.6e-89 333.6 278 56.5
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 2.1e-89 333.2 197 75.6
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 2.8e-89 332.8 209 73.2
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 1.4e-88 330.5 292 56.5
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 7.5e-87 324.7 229 61.1
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 1.3e-86 323.9 273 56.0
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.3e-86 323.9 273 57.1
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 2.2e-86 323.2 256 59.0
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 1.4e-85 320.5 290 53.4
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 7.0e-85 318.2 272 54.8
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 9.2e-85 317.8 275 56.7
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.2e-84 317.4 259 57.1
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 1.6e-84 317.0 243 59.7
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 3.5e-84 315.8 272 54.0
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 5.9e-84 315.1 272 53.7
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 2.5e-82 309.7 275 56.0
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 2.5e-82 309.7 275 56.0
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 2.5e-82 309.7 275 56.0
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 2.5e-82 309.7 275 56.0
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 5.6e-82 308.5 275 55.6
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 5.6e-82 308.5 202 70.8
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 9.5e-82 307.8 275 53.8
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 2.8e-81 306.2 275 55.3
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 2.3e-80 303.1 283 54.1
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 1.9e-77 293.5 225 60.4
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 3.5e-76 289.3 228 57.5
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 3.3e-74 282.7 234 56.0
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 1.6e-73 280.4 239 59.0
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 2.0e-71 273.5 271 51.3
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 1.1e-69 267.7 199 62.8
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 1.1e-69 267.7 229 52.8
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 2.1e-68 263.5 154 75.3
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 4.6e-68 262.3 289 48.1
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.3e-67 260.8 281 48.8
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 6.6e-67 258.5 282 47.9
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 8.6e-67 258.1 219 56.2
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 6.2e-65 251.9 237 49.8
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 4.0e-64 249.2 217 53.9
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 1.2e-63 247.7 228 50.4
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.4e-63 246.1 228 49.6
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 1.9e-61 240.4 228 51.3
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.4e-61 240.0 227 47.6
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 3.3e-58 229.6 244 45.9
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 1.2e-57 227.6 239 45.6
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.1e-57 226.9 184 60.3
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 4.0e-56 222.6 154 61.7
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 2.9e-54 216.5 250 47.2
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 5.4e-53 212.2 133 71.4
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 5.4e-53 212.2 250 42.8
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 6.0e-52 208.8 154 63.6
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 3.0e-51 206.5 242 45.5
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 8.7e-51 204.9 195 51.3
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 1.9e-50 203.8 189 51.9
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 1.5e-47 194.1 220 43.2
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 6.4e-46 188.7 322 35.1
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 1.4e-45 187.6 153 58.2
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 6.2e-41 172.2 109 71.6
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 3.0e-35 153.3 96 68.8
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 4.8e-33 146.0 87 74.7
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 3.0e-27 126.7 92 64.1
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 8.2e-17 92.0 51 78.4
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 7.2e-13 79.0 74 47.3
BcaC09g50623 Brassica carinata HOM05D003931 ORTHO05D004577 3.6e-12 76.6 100 42.0
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 2.0e-07 60.8 43 65.1


User provided reference genes

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