Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 0.0e+00 1213.7 701 100.0
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 5.2e-208 728.4 701 66.9
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 1.2e-199 700.7 704 64.2
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 1.5e-199 700.3 701 56.6
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 1.7e-190 670.2 703 60.9
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 8.4e-190 667.9 704 63.1
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 9.0e-184 647.9 701 61.5
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 1.7e-182 643.7 701 60.8
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 1.7e-182 643.7 702 58.1
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 1.7e-182 643.7 703 59.2
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 2.9e-182 642.9 701 61.1
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 4.9e-182 642.1 701 61.2
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 1.2e-180 637.5 700 59.3
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.2e-180 637.5 701 60.2
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.2e-180 637.5 701 60.3
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 2.7e-180 636.3 701 58.2
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 4.6e-180 635.6 701 60.3
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 7.3e-178 628.2 702 60.0
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 1.7e-174 617.1 701 57.8
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 1.2e-172 610.9 707 58.8
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 2.3e-171 606.7 709 57.5
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 1.9e-170 603.6 707 59.0
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 1.3e-169 600.9 705 58.0
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 1.3e-169 600.9 701 58.1
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 3.7e-169 599.4 711 53.6
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 8.1e-169 598.2 706 56.5
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 1.1e-168 597.8 703 56.8
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 5.3e-168 595.5 705 58.0
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 1.2e-167 594.3 706 57.9
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 4.5e-167 592.4 711 56.3
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 3.2e-165 586.3 705 55.2
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 1.6e-164 583.9 706 55.4
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 2.1e-164 583.6 703 57.8
Prupe.1G533400 Prunus persica HOM05D003682 ORTHO05D004224 7.9e-164 581.6 702 57.3
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 1.0e-163 581.3 708 55.9
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 1.8e-163 580.5 703 53.2
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 9.6e-162 574.7 708 52.5
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 1.3e-161 574.3 707 48.8
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 1.3e-161 574.3 705 56.3
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 2.8e-161 573.2 703 56.8
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.1e-160 571.2 729 52.9
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.4e-160 570.9 757 48.6
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 5.3e-160 568.9 712 53.4
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 9.0e-160 568.2 709 55.7
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 1.2e-159 567.8 706 56.5
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 1.5e-159 567.4 708 53.0
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 1.5e-159 567.4 702 50.6
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 5.8e-159 565.5 700 54.4
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 1.0e-158 564.7 720 53.2
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 1.0e-158 564.7 708 52.1
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 1.3e-158 564.3 714 53.6
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 1.4e-157 560.8 708 54.1
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 1.2e-156 557.8 708 55.4
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 4.6e-156 555.8 702 53.6
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 7.9e-156 555.1 671 56.0
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 1.8e-155 553.9 700 54.6
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 5.1e-155 552.4 704 54.4
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 1.9e-154 550.4 702 50.4
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 5.7e-154 548.9 700 55.1
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 2.8e-153 546.6 732 52.9
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 3.7e-153 546.2 701 53.6
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 4.8e-153 545.8 702 55.6
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 6.3e-153 545.4 696 54.5
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 1.4e-152 544.3 699 54.2
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 1.5e-151 540.8 701 54.5
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 1.5e-151 540.8 697 53.1
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 3.4e-151 539.7 702 54.0
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 1.3e-150 537.7 708 54.9
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 3.8e-150 536.2 700 55.6
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 6.5e-150 535.4 709 54.3
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 2.5e-149 533.5 733 52.4
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 4.2e-149 532.7 770 42.2
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 1.6e-148 530.8 698 54.6
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 2.1e-148 530.4 701 53.6
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 4.6e-148 529.3 698 53.7
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 6.1e-148 528.9 703 52.1
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 2.3e-147 526.9 700 53.4
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 8.8e-147 525.0 700 55.6
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 1.1e-146 524.6 697 54.5
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 1.1e-146 524.6 701 54.6
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 1.5e-146 524.2 703 53.3
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 9.7e-146 521.5 703 53.5
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 9.7e-146 521.5 700 53.1
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 8.2e-145 518.5 630 58.7
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 1.7e-142 510.8 709 50.6
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 5.0e-142 509.2 711 52.5
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 8.5e-142 508.4 706 53.4
Nn5g27243 Nelumbo nucifera HOM05D003682 ORTHO05D004224 8.5e-142 508.4 648 57.4
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 1.9e-141 507.3 740 47.2
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 4.2e-141 506.1 707 52.1
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 2.1e-140 503.8 702 49.3
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 6.7e-139 498.8 703 46.8
Sc26g0002240 Simmondsia chinensis HOM05D003682 ORTHO05D004224 4.4e-138 496.1 631 55.5
ATR0767G054 Amborella trichopoda HOM05D003682 ORTHO05D004224 7.4e-138 495.4 711 51.1
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 4.1e-136 489.6 700 53.6
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 5.5e-133 479.2 705 51.9
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 2.3e-131 473.8 705 46.0
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 4.1e-128 463.0 708 40.7
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 2.5e-125 453.8 703 49.5
Oeu025829.1 Olea europaea HOM05D003682 ORTHO05D004224 1.0e-123 448.4 646 52.9
BcaC09g50863 Brassica carinata HOM05D003682 ORTHO05D004224 4.1e-120 436.4 572 53.8
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 3.5e-119 433.3 711 40.8
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 1.1e-117 428.3 710 41.7
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 2.5e-117 427.2 695 40.4
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 6.1e-116 422.5 716 46.6
Atru.chr13.999 Acer truncatum HOM05D003682 ORTHO05D004224 1.6e-111 407.9 484 59.7
AT5G41820 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 5.0e-110 402.9 724 42.1
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 9.5e-109 398.7 726 40.1
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 4.7e-108 396.4 710 39.7
CSS0003141 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.0e-106 391.0 526 48.1
AUR62037113 Chenopodium quinoa HOM05D003682 ORTHO05D004224 6.3e-105 386.0 533 41.1
MD15G1387100 Malus domestica HOM05D003682 ORTHO05D004224 4.6e-103 379.8 520 51.9
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 8.6e-102 375.6 518 51.5
SHI09562 Sapria himalayana HOM05D003682 ORTHO05D000023 5.2e-99 366.3 540 44.6
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 8.9e-99 365.5 703 37.1
CDE01G0832 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 9.8e-98 362.1 631 49.3
SalBow4G2331 Salvia bowleyana HOM05D003682 ORTHO05D004224 1.2e-95 355.1 519 51.4
SEGI_15297 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 6.2e-84 316.2 526 40.3
GSVIVG01009191001 Vitis vinifera HOM05D003682 ORTHO05D004224 5.8e-82 309.7 316 57.6
Prupe.1G572600 Prunus persica HOM05D003682 ORTHO05D004224 7.6e-82 309.3 460 44.8
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 3.0e-78 297.4 721 42.3
Glyma.02G123302 Glycine max HOM05D003682 ORTHO05D004224 7.3e-69 266.2 351 42.2
HanXRQChr08g0233491 Helianthus annuus HOM05D003682 ORTHO05D004224 1.2e-63 248.8 423 49.4
SEGI_17476 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 3.9e-62 243.8 434 39.2
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.4e-59 235.3 477 35.2
CSS0029858 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.8e-59 235.0 476 34.9
Lalb_Chr04g0252801 Lupinus albus HOM05D003682 ORTHO05D004224 1.2e-58 232.3 259 64.5
GSVIVG01009190001 Vitis vinifera HOM05D003682 ORTHO05D004224 9.9e-58 229.2 254 71.3
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 8.4e-57 226.1 251 58.2
Cpa.g.c39765 Carica papaya HOM05D003682 ORTHO05D004224 2.0e-50 204.9 200 52.0
CBR_g19613 Chara braunii HOM05D003682 ORTHO05D004224 5.8e-50 203.4 711 31.1
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 1.3e-46 192.2 122 75.4
unitig_0.g155 Utricularia gibba HOM05D003682 ORTHO05D004224 1.6e-44 185.3 274 48.2
BcaNung04806 Brassica carinata HOM05D003682 ORTHO05D004224 1.3e-41 175.6 122 70.5
Cpa.g.c34457.1 Carica papaya HOM05D003682 ORTHO05D004224 3.1e-35 154.5 132 61.4
SalBow4G1793 Salvia bowleyana HOM05D003682 ORTHO05D004224 4.5e-34 150.6 212 50.9
Actinidia36899 Actinidia chinensis HOM05D003682 ORTHO05D004224 1.1e-32 146.0 136 70.6
AagrBONN_evm.TU.Sc2ySwM_117.1254 Anthoceros agrestis HOM05D003682 ORTHO05D004224 1.1e-32 146.0 236 37.3
Pp3c1_10430 Physcomitrium patens HOM05D003682 ORTHO05D004224 1.9e-32 145.2 521 28.2
SHI09561 Sapria himalayana HOM05D000105 ORTHO05D000023 7.4e-29 133.3 121 55.4
Dinv42603 Davidia involucrata HOM05D003682 ORTHO05D004224 2.4e-27 128.3 135 53.3
SEGI_24080 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 5.3e-27 127.1 122 50.8
HanXRQChr08g0233481 Helianthus annuus HOM05D003682 ORTHO05D004224 6.9e-27 126.7 140 63.6
HPP92_013470 Vanilla planifolia HOM05D003682 ORTHO05D004224 4.5e-26 124.0 214 43.9
unitig_0.g156 Utricularia gibba HOM05D003682 ORTHO05D004224 5.9e-26 123.6 109 55.0
PGR102G2117 Punica granatum HOM05D003682 ORTHO05D004224 7.7e-26 123.2 260 34.2
BcaB06g27567 Brassica carinata HOM05D003682 ORTHO05D004224 1.0e-25 122.9 114 58.8
SMO307G0051 Selaginella moellendorffii HOM05D003682 ORTHO05D004224 4.7e-23 114.0 122 48.4
CSS0023594 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.1e-21 109.4 98 57.1
CSS0005132 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.4e-21 107.5 94 58.5
Psat5g049320 Pisum sativum HOM05D003682 ORTHO05D004224 5.7e-21 107.1 160 41.2
BcaNung05639 Brassica carinata HOM05D006679 ORTHO05D008461 1.1e-19 102.8 136 41.9
EL10Ac3g05976 Beta vulgaris HOM05D003682 ORTHO05D004224 1.6e-18 99.0 71 64.8
Aqoxy2G00859 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 6.5e-17 93.6 99 49.5
CSS0003380 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.2e-16 91.3 95 50.5
CSS0026243 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.2e-16 91.3 99 48.5
CSS0040590 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.2e-16 91.3 99 48.5
CSS0014234 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.2e-15 89.4 99 48.5
CSS0042448 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.8e-14 85.5 99 46.5
CSS0006921 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.1e-13 82.8 99 45.5
CSS0000677 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.6e-13 81.6 99 46.5
CSS0029231 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 7.5e-13 80.1 99 45.5
Lsat_1_v5_gn_3_58200 Lactuca sativa HOM05D003682 ORTHO05D004224 9.7e-13 79.7 76 53.9
MCO12G062 Micromonas commoda HOM05D003682 ORTHO05D004224 1.3e-12 79.3 281 28.5
Prupe.1G572700 Prunus persica HOM05D003682 ORTHO05D004224 1.1e-11 76.3 67 53.7
Cre07.g339350 Chlamydomonas reinhardtii HOM05D003682 ORTHO05D004224 1.4e-11 75.9 127 36.2
arahy.Tifrunner.gnm1.ann1.R6K80C Arachis hypogaea HOM05D003682 ORTHO05D004224 1.8e-11 75.5 120 37.5
PRCOL_00003254 Prasinoderma coloniale HOM05D003682 ORTHO05D004224 3.1e-11 74.7 263 25.1
CSS0029499 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 7.0e-11 73.6 65 58.5
CSS0045772 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.7e-10 71.6 65 56.9
Lalb_Chr04g0252781 Lupinus albus HOM05D003682 ORTHO05D004224 5.9e-10 70.5 75 54.7
CSS0029631 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.3e-09 69.3 65 55.4
CSS0037736 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.7e-09 68.9 65 55.4
CSS0020196 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.2e-09 68.6 65 55.4
CSS0037747 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.2e-09 68.6 65 55.4
arahy.Tifrunner.gnm1.ann1.H7L4UV Arachis hypogaea HOM05D003682 ORTHO05D004224 8.5e-09 66.6 110 40.0
TAR628G0387 Trochodendron aralioides HOM05D003682 ORTHO05D004224 9.4e-08 63.2 44 59.1
HanXRQChr11g0332681 Helianthus annuus HOM05D003682 ORTHO05D004224 4.7e-07 60.8 53 60.4
CAN.G475.12 Capsicum annuum HOM05D003682 ORTHO05D004224 5.2e-06 57.4 53 52.8
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 6.8e-06 57.0 29 82.8


User provided reference genes

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